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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2396446..2397507+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008564-T1 ID=KJC3_008564-T1|Name=KJC3_008564-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1062bp|location=Sequence derived from alignment at ch6:2396446..2397507+ (Aspergillus niger KJC3) ATTTAGCTGTCTCGAGTCTAGATTCCCTCGAGATCCTCCATTCTCTCGCA
GATTTTCGGCGGCTATAGAATTACCATCTATCCGCCAACCGACACCATGC
TGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATT
CTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTC
GCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTG
GAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGA
CAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTT
GTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTGGATTTATTCT
CTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTTTATCTATCGG
AACGATGCTAATACAGTGGAATTGCAGCCTGTGCGGAGAAAGAACCGCGT
CTACATTATCTGGTAAGATCACATCGATACAAGCTGCAAGTGCACTATAG
CATGATCGCTGACATTTTCGTTCTGCAAAATAGCTCCAAGAACCCGAAGC
ACAAGCAGCGCCAAGGGAAATAGATTGTTGGAAACGATTGCGAGAGCATG
AGAGAATGAGCGTACCTTCGAACGAGATTTGCTTGCATTGAACATCAACT
GAAGCCGATGGAAGAGCTAGCATTACTTGCATGACCTCTGCCTGATACTG
CGACGGTGGTAGTCAAATCGTGAATAGATGTATTGTGGGTATACGGCTAC
TACTACTGGGTCTCGACATTGGGAAAGCCGCGCATTTGCTATGGGATACG
ACCAACTGGTTGGTTAGGCGCTTTGTTGCATTGTTTGTACATTAATTGTG
TCTATATATTGGAATTCTCTTTCTTCAAATCATTCTTCCTGGGTGAATTG
ATATCTTGGTGGTTGTTTGAGGGGTCAATTGTACCTCGGATGCGCGGAAT
TCTCACGCGACACTGCCTGATCCCACGGTTCCATGATCTGCTTCTCTTGC
ATCCTCGCCTCC back to topCoding sequence (CDS) from alignment at ch6:2396446..2397507+ >KJC3_008564-T1 ID=KJC3_008564-T1|Name=KJC3_008564-T1|organism=Aspergillus niger KJC3|type=CDS|length=912bp|location=Sequence derived from alignment at ch6:2396446..2397507+ (Aspergillus niger KJC3) ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC GGTTGTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTGGATTTA TTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTTTATCTA TCGGAACGATGCTAATACAGTGGAATTGCAGCCTGTGCGGAGAAAGAACC GCGTCTACATTATCTGCTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGG AAATAGATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCT CCGTCAAATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGC GCCCTTTTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTT TTGCGCTCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTC AACATTGAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGG TGAAGCGGTTGTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTG GATTTATTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTT TATCTATCGGAACGATGCTAATACAGTGGAATTGCAGCCTGTGCGGAGAA AGAACCGCGTCTACATTATCTGCTCCAAGAACCCGAAGCACAAGCAGCGC CAAGGGAAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005840 | ribosome |
Vocabulary: Biological Process
Term | Definition |
GO:0006412 | translation |
Vocabulary: Molecular Function
Term | Definition |
GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008564-T1.utr5p1 | KJC3_008564-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008564-T1.utr3p1 | KJC3_008564-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR035977 |
DBxref | InterPro:IPR000473 |
DBxref | PFAM:PF00444 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2396446..2397507 + |
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