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KJC3_008564-T1, KJC3_008564-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008564-T1
Unique NameKJC3_008564-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2396446..2397507+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008564-T1 ID=KJC3_008564-T1|Name=KJC3_008564-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1062bp|location=Sequence derived from alignment at ch6:2396446..2397507+ (Aspergillus niger KJC3)
ATTTAGCTGTCTCGAGTCTAGATTCCCTCGAGATCCTCCATTCTCTCGCA
GATTTTCGGCGGCTATAGAATTACCATCTATCCGCCAACCGACACCATGC
TGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCAAATT
CTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTTTTTC
GCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGCTCTG
GAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATTGAGA
CAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGCGGTT
GTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTGGATTTATTCT
CTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTTTATCTATCGG
AACGATGCTAATACAGTGGAATTGCAGCCTGTGCGGAGAAAGAACCGCGT
CTACATTATCTGGTAAGATCACATCGATACAAGCTGCAAGTGCACTATAG
CATGATCGCTGACATTTTCGTTCTGCAAAATAGCTCCAAGAACCCGAAGC
ACAAGCAGCGCCAAGGGAAATAGATTGTTGGAAACGATTGCGAGAGCATG
AGAGAATGAGCGTACCTTCGAACGAGATTTGCTTGCATTGAACATCAACT
GAAGCCGATGGAAGAGCTAGCATTACTTGCATGACCTCTGCCTGATACTG
CGACGGTGGTAGTCAAATCGTGAATAGATGTATTGTGGGTATACGGCTAC
TACTACTGGGTCTCGACATTGGGAAAGCCGCGCATTTGCTATGGGATACG
ACCAACTGGTTGGTTAGGCGCTTTGTTGCATTGTTTGTACATTAATTGTG
TCTATATATTGGAATTCTCTTTCTTCAAATCATTCTTCCTGGGTGAATTG
ATATCTTGGTGGTTGTTTGAGGGGTCAATTGTACCTCGGATGCGCGGAAT
TCTCACGCGACACTGCCTGATCCCACGGTTCCATGATCTGCTTCTCTTGC
ATCCTCGCCTCC
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Coding sequence (CDS) from alignment at ch6:2396446..2397507+

>KJC3_008564-T1 ID=KJC3_008564-T1|Name=KJC3_008564-T1|organism=Aspergillus niger KJC3|type=CDS|length=912bp|location=Sequence derived from alignment at ch6:2396446..2397507+ (Aspergillus niger KJC3)
ATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCTCCGTCA
AATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGCGCCCTT
TTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTTTTGCGC
TCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTCAACATT
GAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGGTGAAGC
GGTTGTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTGGATTTA
TTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTTTATCTA
TCGGAACGATGCTAATACAGTGGAATTGCAGCCTGTGCGGAGAAAGAACC
GCGTCTACATTATCTGCTCCAAGAACCCGAAGCACAAGCAGCGCCAAGGG
AAATAGATGCTGTCTTTCCGTTCCGTCTTCGGGGCTTCGACCGGTGCCCT
CCGTCAAATTCTCCCCTCCTTCTCTCGCCGGTCCGCCGCTCTTGTTTCGC
GCCCTTTTTCGCAAATCGCACGCCTTTCCCTTGGCAATGGCCTTCGCCTT
TTGCGCTCTGGAAAGCAGACCAACAATGTCGGAGTTGCTAGTGTGGGGTC
AACATTGAGACAGGTTGAGCAGGTTCGGGGAATGAAGACTCGCTCATCGG
TGAAGCGGTTGTGTGATGGCTGCAAGGTATGCCATGATCTAGTTGGATTG
GATTTATTCTCTTTTGTTGGAGAAGTTAGCTTTAGCAGGAGTTTGCGTTT
TATCTATCGGAACGATGCTAATACAGTGGAATTGCAGCCTGTGCGGAGAA
AGAACCGCGTCTACATTATCTGCTCCAAGAACCCGAAGCACAAGCAGCGC
CAAGGGAAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008564KJC3_008564Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008564-T1.utr5p1KJC3_008564-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008564-T1.exon1KJC3_008564-T1.exon1Aspergillus niger KJC3exon
KJC3_008564-T1.exon2KJC3_008564-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008564-T1.cdsKJC3_008564-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008564-T1.utr3p1KJC3_008564-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008564-T1KJC3_008564-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035977
DBxrefInterPro:IPR000473
DBxrefPFAM:PF00444
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2396446..2397507 +
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