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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2399434..2401760- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008566-T1 ID=KJC3_008566-T1|Name=KJC3_008566-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2327bp|location=Sequence derived from alignment at ch6:2399434..2401760- (Aspergillus niger KJC3)
CACTGCTAGTTCCGAGAATAAATAGCTGGCCTTGTCCGGAATTGATTGGA
AATCTCTCTAGAGTTCTGTTGAATAGCAAACTGCTGAAAGTGGTGGTACA
CCGATCCAAACACACGATTCCCTCCCAGACAAACCGAGGTCTCCCCGCAC
CGAACTTCGGAACGAAGAGCGAGAGAGAGCAGCTGGAGATCTGCTCGTCC
ACACGACCCGCTCGCTGGGTGTGATAGATTACAGTGCATCAATCATGGAG
AGATTTATTCGTCCAGTTTCCCGGCAGCTCTTGAGACCGCGCCTTCGTTA
TCCCTTTGCCATTCCTGCTCCTATCCACACTAAACGCCTAGTTTCCACCA
TGGGTTACACTGTCCCTCCGGTTCGTGCTTCTGCCTTTCATTTCTCATTC
ATGAGAATTATTGCTAATATCCTGGCTATTATATAGCTCAAAGACCAATC
CCTCTTCATTCAAAAGGCATACGTCAATGGCGAGTGGGTAGACGCTCAGT
CCGGACAGACCTTCGAAGTCCACGGTAGGCCATGCACCACCTTCCACAAC
CAAACCGAGTGACCAGCTATACTCATCACAGGACTACTTTTTCAGACCCT
GCCTCCGGAAAACTCATCGGAACATGTCCCGAATTCTCCGCCGCAGACAC
CGAGAAGGCTATCCAAGCCGCCAAAGAAGCCTTCCCCAAATTCCGCACAA
CCCTGTCCCGCGAGCGCGCCCGCATGCTGCGCAGATGGTACCAGCTCATG
ATCGACAATGCCGACGACCTAGCCACCCTGATAACCTGGGAAAACGGAAA
GCCGCTCACCGACGCCAAAGGCGAGGTGAACTACGCGGCCAGCTTCTTCG
AATGGTTCAGCGAAGAAGCTCCCCGCATCTATGGTGACACCATCCCATCC
TCCGTCCCCGGCAACCGGGTCATGACCCTGAAGCAACCCGTCGGCGTCTG
TGGTCTCATCACACCCTGGAACTTCCCCGCCGCCATGATCACCAGGAAGA
TTGGTCCTGCCCTCGCAGCCGGCTGCACCGTCGTCGCAAAGACCCCCGGT
GAAACTCCCTTCACAGCCAACGCCCTCGCCGAGCTGGCCCACCGCGCCGG
CATCCCCAAGGGCGTCGTCAACATCGTCACCGCATCCCAAAACACCCCCG
AGGTCGGCGAAACCATCACCACCCACCCCGAGGTCCGCAAGGTCTCCTTC
ACCGGCTCCACCAACGTCGGTAAGCTCCTCATGAAGCAATCCTCGTCGAC
CATCAAAAAGGTGTCCTGGGAACTAGGCGGCAACGCCCCCTTCATCGTCT
TTGACGACGTCGAGGACCTCGACGCTGCTGTCGCCGGCGCTGTGGCCTCC
AAATTCCGTAGCTCTGGACAGACCTGTGTCTGTGCAAACCGGATCTACGT
GCAGCGCGGCATCTACGATGAATTCGCCAAGCGCTTCGCAGAGAAGGTCA
AGGGCTTCAAGCTGGGTGCTGGCTTCGAAGAAGGCGTTACCCACGGTCCT
GTTATTCACGACCGCGCCGTCAACAAGGTCGACGAACACGTCCGCGACGC
TGTATCCAAGGGCGCGCAGGTCCTGACGGGTGGTCAGAAGGCCGCTCACC
TTGGTCCTAACTTCTACGATTTGACTGTCCTCACGGAGATGAACAAGGAT
ATGCTTGTCGCTTCGGAGGAGACTTTCGGCCCTGTCGCGGGACTTTTCCC
CTTCGAGACGGAACAAGAAGTTGTTGACCTGGCTAACAAGGCTGAGGTTG
GTCTGGCGGGCTACTTCTTCAGCAGTAATGTTAAGCGCATCTTCCGTGTT
GCGGAGGCGTTGGAGGTCGGTATGGTGGGTGTTAACACGGGGCTTATTAG
TGATGTTGCTTCGCCGTGAGTATACCCTTGTTTGCTTTCTTTGGGATTGT
CGTTGTTGAATGTTGCTTGCTAACCGTTTGGTTGAATAGGTTCGGTGGTG
TCAAGCAGAGCGGCTTTGGCCGCGAGGGCAGCAAGTACGGTATTGATGAA
TTCTTGGTGGTCAAGAGTGTTACTTTTGGAGGAATTGAGCCTCTTCAGTA
GGCTATGGGTAAATAAATTGGGATATTAGATTGGTTGGTTCATGGATTTC
TGGGAATGGGGTTTGTTCAAATTTATGCAGTACTTTATATATATTATGGA
GCCATGACGGAATGTATCATTTCAACTTTCATTCACGCGCATAGTAGAAC
ACACACACACAAACCACTACATTGAAGTATCTCCTTCATACCCTCTACAT
CAATCATCACGAAAAGTCCTACTAGTAGTACTATGAACTAAGCCAACCCC
CCACACCTCCCCCCTTTCCTAAAATTC back to topCoding sequence (CDS) from alignment at ch6:2399434..2401760- >KJC3_008566-T1 ID=KJC3_008566-T1|Name=KJC3_008566-T1|organism=Aspergillus niger KJC3|type=CDS|length=6384bp|location=Sequence derived from alignment at ch6:2399434..2401760- (Aspergillus niger KJC3)
GTTCGGTGGTGTCAAGCAGAGCGGCTTTGGCCGCGAGGGCAGCAAGTACG
GTATTGATGAATTCTTGGTGGTCAAGAGTGTTACTTTTGGAGGAATTGAG
CCTCTTCAGTAGACCCTGCCTCCGGAAAACTCATCGGAACATGTCCCGAA
TTCTCCGCCGCAGACACCGAGAAGGCTATCCAAGCCGCCAAAGAAGCCTT
CCCCAAATTCCGCACAACCCTGTCCCGCGAGCGCGCCCGCATGCTGCGCA
GATGGTACCAGCTCATGATCGACAATGCCGACGACCTAGCCACCCTGATA
ACCTGGGAAAACGGAAAGCCGCTCACCGACGCCAAAGGCGAGGTGAACTA
CGCGGCCAGCTTCTTCGAATGGTTCAGCGAAGAAGCTCCCCGCATCTATG
GTGACACCATCCCATCCTCCGTCCCCGGCAACCGGGTCATGACCCTGAAG
CAACCCGTCGGCGTCTGTGGTCTCATCACACCCTGGAACTTCCCCGCCGC
CATGATCACCAGGAAGATTGGTCCTGCCCTCGCAGCCGGCTGCACCGTCG
TCGCAAAGACCCCCGGTGAAACTCCCTTCACAGCCAACGCCCTCGCCGAG
CTGGCCCACCGCGCCGGCATCCCCAAGGGCGTCGTCAACATCGTCACCGC
ATCCCAAAACACCCCCGAGGTCGGCGAAACCATCACCACCCACCCCGAGG
TCCGCAAGGTCTCCTTCACCGGCTCCACCAACGTCGGTAAGCTCCTCATG
AAGCAATCCTCGTCGACCATCAAAAAGGTGTCCTGGGAACTAGGCGGCAA
CGCCCCCTTCATCGTCTTTGACGACGTCGAGGACCTCGACGCTGCTGTCG
CCGGCGCTGTGGCCTCCAAATTCCGTAGCTCTGGACAGACCTGTGTCTGT
GCAAACCGGATCTACGTGCAGCGCGGCATCTACGATGAATTCGCCAAGCG
CTTCGCAGAGAAGGTCAAGGGCTTCAAGCTGGGTGCTGGCTTCGAAGAAG
GCGTTACCCACGGTCCTGTTATTCACGACCGCGCCGTCAACAAGGTCGAC
GAACACGTCCGCGACGCTGTATCCAAGGGCGCGCAGGTCCTGACGGGTGG
TCAGAAGGCCGCTCACCTTGGTCCTAACTTCTACGATTTGACTGTCCTCA
CGGAGATGAACAAGGATATGCTTGTCGCTTCGGAGGAGACTTTCGGCCCT
GTCGCGGGACTTTTCCCCTTCGAGACGGAACAAGAAGTTGTTGACCTGGC
TAACAAGGCTGAGGTTGGTCTGGCGGGCTACTTCTTCAGCAGTAATGTTA
AGCGCATCTTCCGTGTTGCGGAGGCGTTGGAGGTCGGTATGGTGGGTGTT
AACACGGGGCTTATTAGTGATGTTGCTTCGCCCTCAAAGACCAATCCCTC
TTCATTCAAAAGGCATACGTCAATGGCGAGTGGGTAGACGCTCAGTCCGG
ACAGACCTTCGAAGTCCACGATGGAGAGATTTATTCGTCCAGTTTCCCGG
CAGCTCTTGAGACCGCGCCTTCGTTATCCCTTTGCCATTCCTGCTCCTAT
CCACACTAAACGCCTAGTTTCCACCATGGGTTACACTGTCCCTCCGGTTC
GGTGGTGTCAAGCAGAGCGGCTTTGGCCGCGAGGGCAGCAAGTACGGTAT
TGATGAATTCTTGGTGGTCAAGAGTGTTACTTTTGGAGGAATTGAGCCTC
TTCAGTAGACCCTGCCTCCGGAAAACTCATCGGAACATGTCCCGAATTCT
CCGCCGCAGACACCGAGAAGGCTATCCAAGCCGCCAAAGAAGCCTTCCCC
AAATTCCGCACAACCCTGTCCCGCGAGCGCGCCCGCATGCTGCGCAGATG
GTACCAGCTCATGATCGACAATGCCGACGACCTAGCCACCCTGATAACCT
GGGAAAACGGAAAGCCGCTCACCGACGCCAAAGGCGAGGTGAACTACGCG
GCCAGCTTCTTCGAATGGTTCAGCGAAGAAGCTCCCCGCATCTATGGTGA
CACCATCCCATCCTCCGTCCCCGGCAACCGGGTCATGACCCTGAAGCAAC
CCGTCGGCGTCTGTGGTCTCATCACACCCTGGAACTTCCCCGCCGCCATG
ATCACCAGGAAGATTGGTCCTGCCCTCGCAGCCGGCTGCACCGTCGTCGC
AAAGACCCCCGGTGAAACTCCCTTCACAGCCAACGCCCTCGCCGAGCTGG
CCCACCGCGCCGGCATCCCCAAGGGCGTCGTCAACATCGTCACCGCATCC
CAAAACACCCCCGAGGTCGGCGAAACCATCACCACCCACCCCGAGGTCCG
CAAGGTCTCCTTCACCGGCTCCACCAACGTCGGTAAGCTCCTCATGAAGC
AATCCTCGTCGACCATCAAAAAGGTGTCCTGGGAACTAGGCGGCAACGCC
CCCTTCATCGTCTTTGACGACGTCGAGGACCTCGACGCTGCTGTCGCCGG
CGCTGTGGCCTCCAAATTCCGTAGCTCTGGACAGACCTGTGTCTGTGCAA
ACCGGATCTACGTGCAGCGCGGCATCTACGATGAATTCGCCAAGCGCTTC
GCAGAGAAGGTCAAGGGCTTCAAGCTGGGTGCTGGCTTCGAAGAAGGCGT
TACCCACGGTCCTGTTATTCACGACCGCGCCGTCAACAAGGTCGACGAAC
ACGTCCGCGACGCTGTATCCAAGGGCGCGCAGGTCCTGACGGGTGGTCAG
AAGGCCGCTCACCTTGGTCCTAACTTCTACGATTTGACTGTCCTCACGGA
GATGAACAAGGATATGCTTGTCGCTTCGGAGGAGACTTTCGGCCCTGTCG
CGGGACTTTTCCCCTTCGAGACGGAACAAGAAGTTGTTGACCTGGCTAAC
AAGGCTGAGGTTGGTCTGGCGGGCTACTTCTTCAGCAGTAATGTTAAGCG
CATCTTCCGTGTTGCGGAGGCGTTGGAGGTCGGTATGGTGGGTGTTAACA
CGGGGCTTATTAGTGATGTTGCTTCGCCCTCAAAGACCAATCCCTCTTCA
TTCAAAAGGCATACGTCAATGGCGAGTGGGTAGACGCTCAGTCCGGACAG
ACCTTCGAAGTCCACGATGGAGAGATTTATTCGTCCAGTTTCCCGGCAGC
TCTTGAGACCGCGCCTTCGTTATCCCTTTGCCATTCCTGCTCCTATCCAC
ACTAAACGCCTAGTTTCCACCATGGGTTACACTGTCCCTCCGGTTCGGTG
GTGTCAAGCAGAGCGGCTTTGGCCGCGAGGGCAGCAAGTACGGTATTGAT
GAATTCTTGGTGGTCAAGAGTGTTACTTTTGGAGGAATTGAGCCTCTTCA
GTAGACCCTGCCTCCGGAAAACTCATCGGAACATGTCCCGAATTCTCCGC
CGCAGACACCGAGAAGGCTATCCAAGCCGCCAAAGAAGCCTTCCCCAAAT
TCCGCACAACCCTGTCCCGCGAGCGCGCCCGCATGCTGCGCAGATGGTAC
CAGCTCATGATCGACAATGCCGACGACCTAGCCACCCTGATAACCTGGGA
AAACGGAAAGCCGCTCACCGACGCCAAAGGCGAGGTGAACTACGCGGCCA
GCTTCTTCGAATGGTTCAGCGAAGAAGCTCCCCGCATCTATGGTGACACC
ATCCCATCCTCCGTCCCCGGCAACCGGGTCATGACCCTGAAGCAACCCGT
CGGCGTCTGTGGTCTCATCACACCCTGGAACTTCCCCGCCGCCATGATCA
CCAGGAAGATTGGTCCTGCCCTCGCAGCCGGCTGCACCGTCGTCGCAAAG
ACCCCCGGTGAAACTCCCTTCACAGCCAACGCCCTCGCCGAGCTGGCCCA
CCGCGCCGGCATCCCCAAGGGCGTCGTCAACATCGTCACCGCATCCCAAA
ACACCCCCGAGGTCGGCGAAACCATCACCACCCACCCCGAGGTCCGCAAG
GTCTCCTTCACCGGCTCCACCAACGTCGGTAAGCTCCTCATGAAGCAATC
CTCGTCGACCATCAAAAAGGTGTCCTGGGAACTAGGCGGCAACGCCCCCT
TCATCGTCTTTGACGACGTCGAGGACCTCGACGCTGCTGTCGCCGGCGCT
GTGGCCTCCAAATTCCGTAGCTCTGGACAGACCTGTGTCTGTGCAAACCG
GATCTACGTGCAGCGCGGCATCTACGATGAATTCGCCAAGCGCTTCGCAG
AGAAGGTCAAGGGCTTCAAGCTGGGTGCTGGCTTCGAAGAAGGCGTTACC
CACGGTCCTGTTATTCACGACCGCGCCGTCAACAAGGTCGACGAACACGT
CCGCGACGCTGTATCCAAGGGCGCGCAGGTCCTGACGGGTGGTCAGAAGG
CCGCTCACCTTGGTCCTAACTTCTACGATTTGACTGTCCTCACGGAGATG
AACAAGGATATGCTTGTCGCTTCGGAGGAGACTTTCGGCCCTGTCGCGGG
ACTTTTCCCCTTCGAGACGGAACAAGAAGTTGTTGACCTGGCTAACAAGG
CTGAGGTTGGTCTGGCGGGCTACTTCTTCAGCAGTAATGTTAAGCGCATC
TTCCGTGTTGCGGAGGCGTTGGAGGTCGGTATGGTGGGTGTTAACACGGG
GCTTATTAGTGATGTTGCTTCGCCCTCAAAGACCAATCCCTCTTCATTCA
AAAGGCATACGTCAATGGCGAGTGGGTAGACGCTCAGTCCGGACAGACCT
TCGAAGTCCACGATGGAGAGATTTATTCGTCCAGTTTCCCGGCAGCTCTT
GAGACCGCGCCTTCGTTATCCCTTTGCCATTCCTGCTCCTATCCACACTA
AACGCCTAGTTTCCACCATGGGTTACACTGTCCCTCCGGTTCGGTGGTGT
CAAGCAGAGCGGCTTTGGCCGCGAGGGCAGCAAGTACGGTATTGATGAAT
TCTTGGTGGTCAAGAGTGTTACTTTTGGAGGAATTGAGCCTCTTCAGTAG
ACCCTGCCTCCGGAAAACTCATCGGAACATGTCCCGAATTCTCCGCCGCA
GACACCGAGAAGGCTATCCAAGCCGCCAAAGAAGCCTTCCCCAAATTCCG
CACAACCCTGTCCCGCGAGCGCGCCCGCATGCTGCGCAGATGGTACCAGC
TCATGATCGACAATGCCGACGACCTAGCCACCCTGATAACCTGGGAAAAC
GGAAAGCCGCTCACCGACGCCAAAGGCGAGGTGAACTACGCGGCCAGCTT
CTTCGAATGGTTCAGCGAAGAAGCTCCCCGCATCTATGGTGACACCATCC
CATCCTCCGTCCCCGGCAACCGGGTCATGACCCTGAAGCAACCCGTCGGC
GTCTGTGGTCTCATCACACCCTGGAACTTCCCCGCCGCCATGATCACCAG
GAAGATTGGTCCTGCCCTCGCAGCCGGCTGCACCGTCGTCGCAAAGACCC
CCGGTGAAACTCCCTTCACAGCCAACGCCCTCGCCGAGCTGGCCCACCGC
GCCGGCATCCCCAAGGGCGTCGTCAACATCGTCACCGCATCCCAAAACAC
CCCCGAGGTCGGCGAAACCATCACCACCCACCCCGAGGTCCGCAAGGTCT
CCTTCACCGGCTCCACCAACGTCGGTAAGCTCCTCATGAAGCAATCCTCG
TCGACCATCAAAAAGGTGTCCTGGGAACTAGGCGGCAACGCCCCCTTCAT
CGTCTTTGACGACGTCGAGGACCTCGACGCTGCTGTCGCCGGCGCTGTGG
CCTCCAAATTCCGTAGCTCTGGACAGACCTGTGTCTGTGCAAACCGGATC
TACGTGCAGCGCGGCATCTACGATGAATTCGCCAAGCGCTTCGCAGAGAA
GGTCAAGGGCTTCAAGCTGGGTGCTGGCTTCGAAGAAGGCGTTACCCACG
GTCCTGTTATTCACGACCGCGCCGTCAACAAGGTCGACGAACACGTCCGC
GACGCTGTATCCAAGGGCGCGCAGGTCCTGACGGGTGGTCAGAAGGCCGC
TCACCTTGGTCCTAACTTCTACGATTTGACTGTCCTCACGGAGATGAACA
AGGATATGCTTGTCGCTTCGGAGGAGACTTTCGGCCCTGTCGCGGGACTT
TTCCCCTTCGAGACGGAACAAGAAGTTGTTGACCTGGCTAACAAGGCTGA
GGTTGGTCTGGCGGGCTACTTCTTCAGCAGTAATGTTAAGCGCATCTTCC
GTGTTGCGGAGGCGTTGGAGGTCGGTATGGTGGGTGTTAACACGGGGCTT
ATTAGTGATGTTGCTTCGCCCTCAAAGACCAATCCCTCTTCATTCAAAAG
GCATACGTCAATGGCGAGTGGGTAGACGCTCAGTCCGGACAGACCTTCGA
AGTCCACGATGGAGAGATTTATTCGTCCAGTTTCCCGGCAGCTCTTGAGA
CCGCGCCTTCGTTATCCCTTTGCCATTCCTGCTCCTATCCACACTAAACG
CCTAGTTTCCACCATGGGTTACACTGTCCCTCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0009013 | succinate-semialdehyde dehydrogenase [NAD(P)+] activity |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009450 | gamma-aminobutyric acid catabolic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008566-T1.utr3p1 | KJC3_008566-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008566-T1.utr5p1 | KJC3_008566-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016161 |
| DBxref | InterPro:IPR016160 |
| DBxref | InterPro:IPR016162 |
| DBxref | InterPro:IPR010102 |
| DBxref | InterPro:IPR016163 |
| DBxref | InterPro:IPR015590 |
| DBxref | PFAM:PF00171 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2399434..2401760 - |
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