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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2449860..2451735- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008587-T1 ID=KJC3_008587-T1|Name=KJC3_008587-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1876bp|location=Sequence derived from alignment at ch6:2449860..2451735- (Aspergillus niger KJC3)
CCGATCCCCCACGCCAACGTTGACCCCAGTCTTGGCTTGGGGGTTGTATA
CATCGGCCCTACGAACGATGGATCTCCTCATCTCATTCCTACTCCGCAAG
AGCAGTCATCATGGCAACGGAACACCCAGGAGATGCTCACAAGCGGTCCC
CTTCGCATGTCGAGGATATCCATCACCCCAGCAAAGTCAGCCATGGAGAT
ACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACTGGAATCAGCCGAGCC
CATTGAGTTGAAGGAACTTGTCCGCAAGATAGACTGGATCATCCTGCCGT
TTCTCTCAGTCTGCTATGCGTTCTACTACGTGAGTATACAGATTCCTCGA
ACGGGACTTTCTGACACGGGCAGATTGACAAAACCACACTGTCATACGCA
GCCATCTTTGGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTC
ATGGCTGTCTTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTA
CCAACTTCCTCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAAT
ATCTTTCTATGGGGGTTCTTTCTGATGTTACAGGGTGAGTATATTGCTAG
TTACAATTGATCGTCTGTCTAATAGTAGCAGCTGTCGCAAAGAACTTCAC
GCAACTGGCTGTTCTGCGGGTGATATCGGGGGCCGCTGAAGCATGCAGGT
AAGTATCATCCTCAGTACGCAGACACCAGTAACTGATCATTCAGTGATCC
CGCCTTCATGCTCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCA
TCCGCATTGGAATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGT
GGTCTGCTAGGGTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTG
GAAGTACGAGTTCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTC
TTATTACAATATTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCC
TCCCGAGAAAGACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGG
TGTCGAAAATAAAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCG
ACTGGAAAGTCTGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCC
AATGGAGGAATCTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTT
TTCAACCCGTACGTTGCTTCCCCTAGTATCCCTACAAACTATATATTCTC
ACCACTGACAACATAACCGCAGTGGTAACAACCCTAATGCAAATTCCCTA
CGGCGCCTTCACCTCCCTCATGATCATCATCGCCGTATTCATCAACGACC
GTCTCCCCCCAAACAACCGCTGCCTAACCGCCATCTTCTTCCTCCTCCCC
AACCTCGCTGGCTCCTTCGGCCTCGCCTTCCTCCCCGCCACTAACCAAGT
GGGCCGTCTGATCTGCTACTATCTCACAGGCTCATACAACGCCTCCTTCG
TACTCATCCTATCCATCCTAACGGGAAATATCGCAGGCCATACAAAGAAG
GTCGTCACGAATGCGATGATCTTTCTCGGAGTGTGTGCGGGTAATATCGC
GGGGCCATTCTTCTATCGTTCCGAGCAGGCGCCGCGGTATACCTTGGGAA
TATGGTCCATGGTTGTATCGAACTTCATTGAGATTGCGTTGATTGTGGTT
TTGAGGGTTGTCTTGGCGTGGGAGAACCGGAGAAGGGATAGAATGAGGAT
GAGGGAGGGAGGAGATGGAGTTGGGATTGGGAGTGTGGATGGGGATGATG
TGGTAGCGTTTGGCGATTTGACGGATAAAGAGAATTTGAATTTTCGGTAC
GTTTATTAGATGTGAGGGTGTGGCGG back to topCoding sequence (CDS) from alignment at ch6:2449860..2451735- >KJC3_008587-T1 ID=KJC3_008587-T1|Name=KJC3_008587-T1|organism=Aspergillus niger KJC3|type=CDS|length=7740bp|location=Sequence derived from alignment at ch6:2449860..2451735- (Aspergillus niger KJC3)
TGGTAACAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATG
ATCATCATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTG
CCTAACCGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCC
TCGCCTTCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTAT
CTCACAGGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAAC
GGGAAATATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCT
TTCTCGGAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCC
GAGCAGGCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAA
CTTCATTGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGG
AGAACCGGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTT
GGGATTGGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGAC
GGATAAAGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTC
ATGCTCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCAT
TGGAATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGC
TAGGGTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTAC
GAGTTCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTAC
AATATTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAG
AAAGACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAA
AATAAAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAA
AGTCTGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAG
GAATCTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACC
CCTGTCGCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGG
GGCCGCTGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCAT
CTTTGGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGC
TGTCTTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAAC
TTCCTCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTT
TCTATGGGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGA
GATGCTCACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAG
CAAAGTCAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTG
AACTGGAATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATA
GACTGGATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTG
GTAACAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGAT
CATCATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCC
TAACCGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTC
GCCTTCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCT
CACAGGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGG
GAAATATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTT
CTCGGAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGA
GCAGGCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACT
TCATTGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAG
AACCGGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGG
GATTGGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGG
ATAAAGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCAT
GCTCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTG
GAATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTA
GGGTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGA
GTTCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAA
TATTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAA
AGACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAA
TAAAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAG
TCTGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGA
ATCTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCC
TGTCGCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGG
CCGCTGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCT
TTGGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTG
TCTTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTT
CCTCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTC
TATGGGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGA
TGCTCACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCA
AAGTCAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAA
CTGGAATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGA
CTGGATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTGGT
AACAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGATCA
TCATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCCTA
ACCGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTCGC
CTTCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCTCA
CAGGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGGGA
AATATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTTCT
CGGAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGAGC
AGGCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACTTC
ATTGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAGAA
CCGGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGGGA
TTGGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGGAT
AAAGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCATGC
TCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTGGA
ATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTAGG
GTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGAGT
TCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAATA
TTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAAAG
ACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAATA
AAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAGTC
TGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGAAT
CTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCCTG
TCGCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGGCC
GCTGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCTTT
GGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTGTC
TTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTTCC
TCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTCTA
TGGGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGATG
CTCACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCAAA
GTCAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACT
GGAATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGACT
GGATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTGGTAA
CAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGATCATC
ATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCCTAAC
CGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTCGCCT
TCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCTCACA
GGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGGGAAA
TATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTTCTCG
GAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGAGCAG
GCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACTTCAT
TGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAGAACC
GGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGGGATT
GGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGGATAA
AGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCATGCTC
ATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTGGAAT
CTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTAGGGT
ATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGAGTTC
CTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAATATT
CCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAAAGAC
GACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAATAAA
ACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAGTCTG
GGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGAATCT
CCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCCTGTC
GCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGGCCGC
TGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCTTTGG
AATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTGTCTT
CTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTTCCTC
CTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTCTATG
GGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGATGCT
CACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCAAAGT
CAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACTGG
AATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGACTGG
ATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTGGTAACA
ACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGATCATCAT
CGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCCTAACCG
CCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTCGCCTTC
CTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCTCACAGG
CTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGGGAAATA
TCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTTCTCGGA
GTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGAGCAGGC
GCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACTTCATTG
AGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAGAACCGG
AGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGGGATTGG
GAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGGATAAAG
AGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCATGCTCAT
CACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTGGAATCT
GGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTAGGGTAT
GGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGAGTTCCT
CATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAATATTCC
TCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAAAGACGA
CTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAATAAAAC
CCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAGTCTGGG
TATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGAATCTCC
AACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCCTGTCGC
AAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGGCCGCTG
AAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCTTTGGAA
TCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTGTCTTCT
GTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTTCCTCCT
CCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTCTATGGG
GGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGATGCTCA
CAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCAAAGTCA
GCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACTGGAA
TCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGACTGGAT
CATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008587-T1.utr3p1 | KJC3_008587-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008587-T1.utr5p1 | KJC3_008587-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2449860..2451735 - |
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