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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2449860..2451735- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008587-T1 ID=KJC3_008587-T1|Name=KJC3_008587-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1876bp|location=Sequence derived from alignment at ch6:2449860..2451735- (Aspergillus niger KJC3) CCGATCCCCCACGCCAACGTTGACCCCAGTCTTGGCTTGGGGGTTGTATA
CATCGGCCCTACGAACGATGGATCTCCTCATCTCATTCCTACTCCGCAAG
AGCAGTCATCATGGCAACGGAACACCCAGGAGATGCTCACAAGCGGTCCC
CTTCGCATGTCGAGGATATCCATCACCCCAGCAAAGTCAGCCATGGAGAT
ACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACTGGAATCAGCCGAGCC
CATTGAGTTGAAGGAACTTGTCCGCAAGATAGACTGGATCATCCTGCCGT
TTCTCTCAGTCTGCTATGCGTTCTACTACGTGAGTATACAGATTCCTCGA
ACGGGACTTTCTGACACGGGCAGATTGACAAAACCACACTGTCATACGCA
GCCATCTTTGGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTC
ATGGCTGTCTTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTA
CCAACTTCCTCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAAT
ATCTTTCTATGGGGGTTCTTTCTGATGTTACAGGGTGAGTATATTGCTAG
TTACAATTGATCGTCTGTCTAATAGTAGCAGCTGTCGCAAAGAACTTCAC
GCAACTGGCTGTTCTGCGGGTGATATCGGGGGCCGCTGAAGCATGCAGGT
AAGTATCATCCTCAGTACGCAGACACCAGTAACTGATCATTCAGTGATCC
CGCCTTCATGCTCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCA
TCCGCATTGGAATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGT
GGTCTGCTAGGGTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTG
GAAGTACGAGTTCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTC
TTATTACAATATTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCC
TCCCGAGAAAGACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGG
TGTCGAAAATAAAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCG
ACTGGAAAGTCTGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCC
AATGGAGGAATCTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTT
TTCAACCCGTACGTTGCTTCCCCTAGTATCCCTACAAACTATATATTCTC
ACCACTGACAACATAACCGCAGTGGTAACAACCCTAATGCAAATTCCCTA
CGGCGCCTTCACCTCCCTCATGATCATCATCGCCGTATTCATCAACGACC
GTCTCCCCCCAAACAACCGCTGCCTAACCGCCATCTTCTTCCTCCTCCCC
AACCTCGCTGGCTCCTTCGGCCTCGCCTTCCTCCCCGCCACTAACCAAGT
GGGCCGTCTGATCTGCTACTATCTCACAGGCTCATACAACGCCTCCTTCG
TACTCATCCTATCCATCCTAACGGGAAATATCGCAGGCCATACAAAGAAG
GTCGTCACGAATGCGATGATCTTTCTCGGAGTGTGTGCGGGTAATATCGC
GGGGCCATTCTTCTATCGTTCCGAGCAGGCGCCGCGGTATACCTTGGGAA
TATGGTCCATGGTTGTATCGAACTTCATTGAGATTGCGTTGATTGTGGTT
TTGAGGGTTGTCTTGGCGTGGGAGAACCGGAGAAGGGATAGAATGAGGAT
GAGGGAGGGAGGAGATGGAGTTGGGATTGGGAGTGTGGATGGGGATGATG
TGGTAGCGTTTGGCGATTTGACGGATAAAGAGAATTTGAATTTTCGGTAC
GTTTATTAGATGTGAGGGTGTGGCGG back to topCoding sequence (CDS) from alignment at ch6:2449860..2451735- >KJC3_008587-T1 ID=KJC3_008587-T1|Name=KJC3_008587-T1|organism=Aspergillus niger KJC3|type=CDS|length=7740bp|location=Sequence derived from alignment at ch6:2449860..2451735- (Aspergillus niger KJC3) TGGTAACAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATG ATCATCATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTG CCTAACCGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCC TCGCCTTCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTAT CTCACAGGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAAC GGGAAATATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCT TTCTCGGAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCC GAGCAGGCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAA CTTCATTGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGG AGAACCGGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTT GGGATTGGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGAC GGATAAAGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTC ATGCTCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCAT TGGAATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGC TAGGGTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTAC GAGTTCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTAC AATATTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAG AAAGACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAA AATAAAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAA AGTCTGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAG GAATCTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACC CCTGTCGCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGG GGCCGCTGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCAT CTTTGGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGC TGTCTTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAAC TTCCTCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTT TCTATGGGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGA GATGCTCACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAG CAAAGTCAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTG AACTGGAATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATA GACTGGATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTG GTAACAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGAT CATCATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCC TAACCGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTC GCCTTCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCT CACAGGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGG GAAATATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTT CTCGGAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGA GCAGGCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACT TCATTGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAG AACCGGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGG GATTGGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGG ATAAAGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCAT GCTCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTG GAATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTA GGGTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGA GTTCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAA TATTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAA AGACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAA TAAAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAG TCTGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGA ATCTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCC TGTCGCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGG CCGCTGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCT TTGGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTG TCTTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTT CCTCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTC TATGGGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGA TGCTCACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCA AAGTCAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAA CTGGAATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGA CTGGATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTGGT AACAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGATCA TCATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCCTA ACCGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTCGC CTTCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCTCA CAGGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGGGA AATATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTTCT CGGAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGAGC AGGCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACTTC ATTGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAGAA CCGGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGGGA TTGGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGGAT AAAGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCATGC TCATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTGGA ATCTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTAGG GTATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGAGT TCCTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAATA TTCCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAAAG ACGACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAATA AAACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAGTC TGGGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGAAT CTCCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCCTG TCGCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGGCC GCTGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCTTT GGAATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTGTC TTCTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTTCC TCCTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTCTA TGGGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGATG CTCACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCAAA GTCAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACT GGAATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGACT GGATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTGGTAA CAACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGATCATC ATCGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCCTAAC CGCCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTCGCCT TCCTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCTCACA GGCTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGGGAAA TATCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTTCTCG GAGTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGAGCAG GCGCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACTTCAT TGAGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAGAACC GGAGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGGGATT GGGAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGGATAA AGAGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCATGCTC ATCACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTGGAAT CTGGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTAGGGT ATGGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGAGTTC CTCATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAATATT CCTCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAAAGAC GACTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAATAAA ACCCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAGTCTG GGTATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGAATCT CCAACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCCTGTC GCAAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGGCCGC TGAAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCTTTGG AATCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTGTCTT CTGTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTTCCTC CTCCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTCTATG GGGGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGATGCT CACAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCAAAGT CAGCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACTGG AATCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGACTGG ATCATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTACTGGTAACA ACCCTAATGCAAATTCCCTACGGCGCCTTCACCTCCCTCATGATCATCAT CGCCGTATTCATCAACGACCGTCTCCCCCCAAACAACCGCTGCCTAACCG CCATCTTCTTCCTCCTCCCCAACCTCGCTGGCTCCTTCGGCCTCGCCTTC CTCCCCGCCACTAACCAAGTGGGCCGTCTGATCTGCTACTATCTCACAGG CTCATACAACGCCTCCTTCGTACTCATCCTATCCATCCTAACGGGAAATA TCGCAGGCCATACAAAGAAGGTCGTCACGAATGCGATGATCTTTCTCGGA GTGTGTGCGGGTAATATCGCGGGGCCATTCTTCTATCGTTCCGAGCAGGC GCCGCGGTATACCTTGGGAATATGGTCCATGGTTGTATCGAACTTCATTG AGATTGCGTTGATTGTGGTTTTGAGGGTTGTCTTGGCGTGGGAGAACCGG AGAAGGGATAGAATGAGGATGAGGGAGGGAGGAGATGGAGTTGGGATTGG GAGTGTGGATGGGGATGATGTGGTAGCGTTTGGCGATTTGACGGATAAAG AGAATTTGAATTTTCGGTACGTTTATTAGTGATCCCGCCTTCATGCTCAT CACTAGCATGTGGTACACAAGACGCGAACAGCCCATCCGCATTGGAATCT GGTACACGGCCAATGGCGCTGGAATTGCCCTAGGTGGTCTGCTAGGGTAT GGCATCGGGCAGATCAATGGTGCCCTCGCCTCCTGGAAGTACGAGTTCCT CATCATCGGCGCGCTGTGTGCATTCTGGGGTATTCTTATTACAATATTCC TCCCTGATTCCCCCGTCAATGCTCGTACTTTCTCCTCCCGAGAAAGACGA CTTACCATCGAGCGACTCCGCGACAACCAAACCGGTGTCGAAAATAAAAC CCTCAAGCCGACACAAGTTCTGGAGGCCCTTCTCGACTGGAAAGTCTGGG TATTTCTACTCCTCGGCCTGTCAGGGAACATTCCCAATGGAGGAATCTCC AACTTTGGTACTCTGATCATTCAAGGATTTGGCTTTTCAACCCCTGTCGC AAAGAACTTCACGCAACTGGCTGTTCTGCGGGTGATATCGGGGGCCGCTG AAGCATGCAGATTGACAAAACCACACTGTCATACGCAGCCATCTTTGGAA TCAAGGAGGATTTGAAATTAACCGGAGAGCAATACTCATGGCTGTCTTCT GTCTTCTACTTTGGCTTCCTTGTTTGGGCGTTGCCTACCAACTTCCTCCT CCAGCGCTTTCCTGTTGGGAAGTACCTGGGCGTGAATATCTTTCTATGGG GGTTCTTTCTGATGTTACAGGATGGCAACGGAACACCCAGGAGATGCTCA CAAGCGGTCCCCTTCGCATGTCGAGGATATCCATCACCCCAGCAAAGTCA GCCATGGAGATACGGCACTCGCCCTCCTTGCAGCTGGCGGTGAACTGGAA TCAGCCGAGCCCATTGAGTTGAAGGAACTTGTCCGCAAGATAGACTGGAT CATCCTGCCGTTTCTCTCAGTCTGCTATGCGTTCTACTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008587-T1.utr3p1 | KJC3_008587-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008587-T1.utr5p1 | KJC3_008587-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2449860..2451735 - |
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