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KJC3_008597-T1, KJC3_008597-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008597-T1
Unique NameKJC3_008597-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2468476..2470532-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008597-T1 ID=KJC3_008597-T1|Name=KJC3_008597-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2057bp|location=Sequence derived from alignment at ch6:2468476..2470532- (Aspergillus niger KJC3)
CTAGCATCAACTCTTGCTTGTACGCAGTGGTACTGTATAATTTACAGTGA
CAGATAACATAAACAAAGACTGCCAGATTCTTGTTCTTCAGCATCAGCTA
GTCTAGAACTTGTTAAAGTAGCCAACCCCACATCATACTATTCGTCCCCA
TTCTTGTGGCAGGGCTCAGAACTGGTTGAGAATCAAGAAAGTGAAGAAAC
ACCCTGCAAGGCACCACTGCTTATGACCGTCATAATAGGCTGAATGACCA
AGTGAAACCTCAAGACCCCAATCATGCTCAGTAGGGCCGACCAAACACTA
AGAATGGGGGCGAAGCAGCAAGAAGTGTCTGGTGTGTCAGTTGCAGCCCC
CGTGCATTAGTTCAACAAGGCAGACCGGGATCATTTCACAGCGGGATGTA
ACCCCCTCAATCAGTCATAATATGTGTAGGGACCCTGATCAGAGAATCCA
ACACTTTCCTTCATGTCTCTTTTCTGATTGCGTTGAGCAGAGCTGCGTTT
GTATTTCCCTTTCACTTGCTTTCAATTGCGTTATGTCCAGTTCAGCCGCG
CCCACGATGGACCAGTATCCCCTGGGTGGCCTATCTACAGGCCCAGGCAA
GAGTGCCTTCGTCGTGACGATCATCTCCATGGTACTGGTCACCATCTGCG
TTGGCCTTCGTGTCTGGCTGAGCATCGTCAATCCGCGACCCTTTGGGTTC
ATGGGCTACTTCTACTATGCTGGTTATATCGTTGCTATGGCCTATTCAGC
CCAATTTCTTTGGGGGATCTGCCCGAATGCCATTGGCATGCACATCATGA
CGGCTATGACCTTGTATCCCGATCGGGTGGTCAATGCTTTGAAGGTATGC
CTCTCTACCTCCCTCCCTTCTACACCCAAAGACTAACATCAACTCAACGA
AAGATTGTCCTCGCCAGCGAATTCATCTGGGCCATCGCCACCACCCTAGT
CAAATTCTCCATCCTCAGTCTGTATCTGGAGATTTTCCGCGGCAAGCTTT
TCCGGGCCTCCTGCTACACAATCGGAGCGCTCAGTCTGGCACTGGCAGCA
GCCATGTTCCTGATCGCCGGCCTTCTCTGCCAACCGATCGAGAAGAACTG
GGACCCGCTGATGACGACGGGCCACTGCGGCGACAGCGTCAAAATGGACG
TCGCCACAGCCACCATCAACATGATTTTGGACCTTTTTATCGTGATCCTG
CCTCTCCCGTCGCTCTGGAAACTGCAAATGAGCTGGACCCGCAAGGCCAT
GCTGAGTGGGATTTTTAGTTTGGGTCTTGTGTATGCCTCCCTACCCACCG
TACTCCACTTTAAGAAACTCAAAACTGATCCCGTATGTCTGTCATAGTAT
CTGCGCCATGAACCTAACCCGCATCGTCTTCGCTGTCACCCTCGACATGA
CGGACGCGACCCATGCCATCGCACGCATCGGCCTCTTCTCCATCCTCGAA
GTCAACGTAGGTATGATCTGCGCCTCACTACCAACCCTCGGCCCGCTCAT
CTTCGGCGACCATCGCGGTGGATCCTCTGGCGGACGGAAAGGCACTCCTG
ACCCTCGCTCGTCCGCCGCCATCATGAACACCTTTGTGCGGCGCCGCGCA
GCAGGCCTGGGCCGGAGTGACGGCGGCAGCGGTCGGTTCAGTGAGATGGC
CACGCTGAATGATAACACTGTTTTCGATGAGGAAGCTCTCCCGTTACATC
AGGTTGAGAAGAGTGGTAAGGCGTGCGAGATGGAGGATCATCATGATGCT
ATGATGGCTCCGTCACCTTCGCCGGATCAGACACTACCAAGGAGACCGGA
GACAGCACGGTTGTCGTGTCCGAACGGGCAGGGGAAAGATATTACTATTC
GGACGGATATTCATGTTCGATGATCTTGAAGTTTCTCTGGTGTCCTTTTC
TTTCTTATATTTTTGTCTATACCATATTGTTCTTTGGGGTTCTCCTATTT
TTGGGGTGTGCAAGGGTGGGAAATAATCTCCGAAGGTGTTCATTACGGCT
GAACTTTCCTTTGTCTTCATTACTATACAGTGTATACATGATCAAAAAAT
TACAGAA
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Coding sequence (CDS) from alignment at ch6:2468476..2470532-

>KJC3_008597-T1 ID=KJC3_008597-T1|Name=KJC3_008597-T1|organism=Aspergillus niger KJC3|type=CDS|length=3645bp|location=Sequence derived from alignment at ch6:2468476..2470532- (Aspergillus niger KJC3)
TATCTGCGCCATGAACCTAACCCGCATCGTCTTCGCTGTCACCCTCGACA
TGACGGACGCGACCCATGCCATCGCACGCATCGGCCTCTTCTCCATCCTC
GAAGTCAACGTAGGTATGATCTGCGCCTCACTACCAACCCTCGGCCCGCT
CATCTTCGGCGACCATCGCGGTGGATCCTCTGGCGGACGGAAAGGCACTC
CTGACCCTCGCTCGTCCGCCGCCATCATGAACACCTTTGTGCGGCGCCGC
GCAGCAGGCCTGGGCCGGAGTGACGGCGGCAGCGGTCGGTTCAGTGAGAT
GGCCACGCTGAATGATAACACTGTTTTCGATGAGGAAGCTCTCCCGTTAC
ATCAGGTTGAGAAGAGTGGTAAGGCGTGCGAGATGGAGGATCATCATGAT
GCTATGATGGCTCCGTCACCTTCGCCGGATCAGACACTACCAAGGAGACC
GGAGACAGCACGGTTGTCGTGTCCGAACGGGCAGGGGAAAGATATTACTA
TTCGGACGGATATTCATGTTCGATGAATTGTCCTCGCCAGCGAATTCATC
TGGGCCATCGCCACCACCCTAGTCAAATTCTCCATCCTCAGTCTGTATCT
GGAGATTTTCCGCGGCAAGCTTTTCCGGGCCTCCTGCTACACAATCGGAG
CGCTCAGTCTGGCACTGGCAGCAGCCATGTTCCTGATCGCCGGCCTTCTC
TGCCAACCGATCGAGAAGAACTGGGACCCGCTGATGACGACGGGCCACTG
CGGCGACAGCGTCAAAATGGACGTCGCCACAGCCACCATCAACATGATTT
TGGACCTTTTTATCGTGATCCTGCCTCTCCCGTCGCTCTGGAAACTGCAA
ATGAGCTGGACCCGCAAGGCCATGCTGAGTGGGATTTTTAGTTTGGGTCT
TGTATGTCCAGTTCAGCCGCGCCCACGATGGACCAGTATCCCCTGGGTGG
CCTATCTACAGGCCCAGGCAAGAGTGCCTTCGTCGTGACGATCATCTCCA
TGGTACTGGTCACCATCTGCGTTGGCCTTCGTGTCTGGCTGAGCATCGTC
AATCCGCGACCCTTTGGGTTCATGGGCTACTTCTACTATGCTGGTTATAT
CGTTGCTATGGCCTATTCAGCCCAATTTCTTTGGGGGATCTGCCCGAATG
CCATTGGCATGCACATCATGACGGCTATGACCTTGTATCCCGATCGGGTG
GTCAATGCTTTGAAGTATCTGCGCCATGAACCTAACCCGCATCGTCTTCG
CTGTCACCCTCGACATGACGGACGCGACCCATGCCATCGCACGCATCGGC
CTCTTCTCCATCCTCGAAGTCAACGTAGGTATGATCTGCGCCTCACTACC
AACCCTCGGCCCGCTCATCTTCGGCGACCATCGCGGTGGATCCTCTGGCG
GACGGAAAGGCACTCCTGACCCTCGCTCGTCCGCCGCCATCATGAACACC
TTTGTGCGGCGCCGCGCAGCAGGCCTGGGCCGGAGTGACGGCGGCAGCGG
TCGGTTCAGTGAGATGGCCACGCTGAATGATAACACTGTTTTCGATGAGG
AAGCTCTCCCGTTACATCAGGTTGAGAAGAGTGGTAAGGCGTGCGAGATG
GAGGATCATCATGATGCTATGATGGCTCCGTCACCTTCGCCGGATCAGAC
ACTACCAAGGAGACCGGAGACAGCACGGTTGTCGTGTCCGAACGGGCAGG
GGAAAGATATTACTATTCGGACGGATATTCATGTTCGATGAATTGTCCTC
GCCAGCGAATTCATCTGGGCCATCGCCACCACCCTAGTCAAATTCTCCAT
CCTCAGTCTGTATCTGGAGATTTTCCGCGGCAAGCTTTTCCGGGCCTCCT
GCTACACAATCGGAGCGCTCAGTCTGGCACTGGCAGCAGCCATGTTCCTG
ATCGCCGGCCTTCTCTGCCAACCGATCGAGAAGAACTGGGACCCGCTGAT
GACGACGGGCCACTGCGGCGACAGCGTCAAAATGGACGTCGCCACAGCCA
CCATCAACATGATTTTGGACCTTTTTATCGTGATCCTGCCTCTCCCGTCG
CTCTGGAAACTGCAAATGAGCTGGACCCGCAAGGCCATGCTGAGTGGGAT
TTTTAGTTTGGGTCTTGTATGTCCAGTTCAGCCGCGCCCACGATGGACCA
GTATCCCCTGGGTGGCCTATCTACAGGCCCAGGCAAGAGTGCCTTCGTCG
TGACGATCATCTCCATGGTACTGGTCACCATCTGCGTTGGCCTTCGTGTC
TGGCTGAGCATCGTCAATCCGCGACCCTTTGGGTTCATGGGCTACTTCTA
CTATGCTGGTTATATCGTTGCTATGGCCTATTCAGCCCAATTTCTTTGGG
GGATCTGCCCGAATGCCATTGGCATGCACATCATGACGGCTATGACCTTG
TATCCCGATCGGGTGGTCAATGCTTTGAAGTATCTGCGCCATGAACCTAA
CCCGCATCGTCTTCGCTGTCACCCTCGACATGACGGACGCGACCCATGCC
ATCGCACGCATCGGCCTCTTCTCCATCCTCGAAGTCAACGTAGGTATGAT
CTGCGCCTCACTACCAACCCTCGGCCCGCTCATCTTCGGCGACCATCGCG
GTGGATCCTCTGGCGGACGGAAAGGCACTCCTGACCCTCGCTCGTCCGCC
GCCATCATGAACACCTTTGTGCGGCGCCGCGCAGCAGGCCTGGGCCGGAG
TGACGGCGGCAGCGGTCGGTTCAGTGAGATGGCCACGCTGAATGATAACA
CTGTTTTCGATGAGGAAGCTCTCCCGTTACATCAGGTTGAGAAGAGTGGT
AAGGCGTGCGAGATGGAGGATCATCATGATGCTATGATGGCTCCGTCACC
TTCGCCGGATCAGACACTACCAAGGAGACCGGAGACAGCACGGTTGTCGT
GTCCGAACGGGCAGGGGAAAGATATTACTATTCGGACGGATATTCATGTT
CGATGAATTGTCCTCGCCAGCGAATTCATCTGGGCCATCGCCACCACCCT
AGTCAAATTCTCCATCCTCAGTCTGTATCTGGAGATTTTCCGCGGCAAGC
TTTTCCGGGCCTCCTGCTACACAATCGGAGCGCTCAGTCTGGCACTGGCA
GCAGCCATGTTCCTGATCGCCGGCCTTCTCTGCCAACCGATCGAGAAGAA
CTGGGACCCGCTGATGACGACGGGCCACTGCGGCGACAGCGTCAAAATGG
ACGTCGCCACAGCCACCATCAACATGATTTTGGACCTTTTTATCGTGATC
CTGCCTCTCCCGTCGCTCTGGAAACTGCAAATGAGCTGGACCCGCAAGGC
CATGCTGAGTGGGATTTTTAGTTTGGGTCTTGTATGTCCAGTTCAGCCGC
GCCCACGATGGACCAGTATCCCCTGGGTGGCCTATCTACAGGCCCAGGCA
AGAGTGCCTTCGTCGTGACGATCATCTCCATGGTACTGGTCACCATCTGC
GTTGGCCTTCGTGTCTGGCTGAGCATCGTCAATCCGCGACCCTTTGGGTT
CATGGGCTACTTCTACTATGCTGGTTATATCGTTGCTATGGCCTATTCAG
CCCAATTTCTTTGGGGGATCTGCCCGAATGCCATTGGCATGCACATCATG
ACGGCTATGACCTTGTATCCCGATCGGGTGGTCAATGCTTTGAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008597KJC3_008597Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008597-T1KJC3_008597-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008597-T1.cdsKJC3_008597-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008597-T1.utr3p1KJC3_008597-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008597-T1.exon4KJC3_008597-T1.exon4Aspergillus niger KJC3exon
KJC3_008597-T1.exon3KJC3_008597-T1.exon3Aspergillus niger KJC3exon
KJC3_008597-T1.exon2KJC3_008597-T1.exon2Aspergillus niger KJC3exon
KJC3_008597-T1.exon1KJC3_008597-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008597-T1.utr5p2KJC3_008597-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008597-T1.utr5p1KJC3_008597-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2468476..2470532 -
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