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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2468476..2470532- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008597-T2 ID=KJC3_008597-T2|Name=KJC3_008597-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2057bp|location=Sequence derived from alignment at ch6:2468476..2470532- (Aspergillus niger KJC3)
CTAGCATCAACTCTTGCTTGTACGCAGTGGTACTGTATAATTTACAGTGA
CAGATAACATAAACAAAGACTGCCAGATTCTTGTTCTTCAGCATCAGCTA
GTCTAGAACTTGTTAAAGTAGCCAACCCCACATCATACTATTCGTCCCCA
TTCTTGTGGCAGGGCTCAGAACTGGTTGAGAATCAAGAAAGTGAAGAAAC
ACCCTGCAAGGCACCACTGCTTATGACCGTCATAATAGGCTGAATGACCA
AGTGAAACCTCAAGACCCCAATCATGCTCAGTAGGGCCGACCAAACACTA
AGAATGGGGGCGAAGCAGCAAGAAGTGTCTGGTGTGTCAGTTGCAGCCCC
CGTGCATTAGTTCAACAAGGCAGACCGGGATCATTTCACAGCGGGATGTA
ACCCCCTCAATCAGTCATAATATGTGTAGGGACCCTGATCAGAGAATCCA
ACACTTTCCTTCATGTCTCTTTTCTGATTGCGTTGAGCAGAGCTGCGTTT
GTATTTCCCTTTCACTTGCTTTCAATTGCGTTATGTCCAGTTCAGCCGCG
CCCACGATGGACCAGTATCCCCTGGGTGGCCTATCTACAGGCCCAGGCAA
GAGTGCCTTCGTCGTGACGATCATCTCCATGGTACTGGTCACCATCTGCG
TTGGCCTTCGTGTCTGGCTGAGCATCGTCAATCCGCGACCCTTTGGGTTC
ATGGGCTACTTCTACTATGCTGGTTATATCGTTGCTATGGCCTATTCAGC
CCAATTTCTTTGGGGGATCTGCCCGAATGCCATTGGCATGCACATCATGA
CGGCTATGACCTTGTATCCCGATCGGGTGGTCAATGCTTTGAAGGTATGC
CTCTCTACCTCCCTCCCTTCTACACCCAAAGACTAACATCAACTCAACGA
AAGATTGTCCTCGCCAGCGAATTCATCTGGGCCATCGCCACCACCCTAGT
CAAATTCTCCATCCTCAGTCTGTATCTGGAGATTTTCCGCGGCAAGCTTT
TCCGGGCCTCCTGCTACACAATCGGAGCGCTCAGTCTGGCACTGGCAGCA
GCCATGTTCCTGATCGCCGGCCTTCTCTGCCAACCGATCGAGAAGAACTG
GGACCCGCTGATGACGACGGGCCACTGCGGCGACAGCGTCAAAATGGACG
TCGCCACAGCCACCATCAACATGATTTTGGACCTTTTTATCGTGATCCTG
CCTCTCCCGTCGCTCTGGAAACTGCAAATGAGCTGGACCCGCAAGGCCAT
GCTGAGTGGGATTTTTAGTTTGGGTCTTGTGTATGCCTCCCTACCCACCG
TACTCCACTTTAAGAAACTCAAAACTGATCCCGTATGTCTGTCATAGTAT
CTGCGCCATGAACCTAACCCGCATCGTCTTCGCTGTCACCCTCGACATGA
CGGACGCGACCCATGCCATCGCACGCATCGGCCTCTTCTCCATCCTCGAA
GTCAACGTAGGTATGATCTGCGCCTCACTACCAACCCTCGGCCCGCTCAT
CTTCGGCGACCATCGCGGTGGATCCTCTGGCGGACGGAAAGGCACTCCTG
ACCCTCGCTCGTCCGCCGCCATCATGAACACCTTTGTGCGGCGCCGCGCA
GCAGGCCTGGGCCGGAGTGACGGCGGCAGCGGTCGGTTCAGTGAGATGGC
CACGCTGAATGATAACACTGTTTTCGATGAGGAAGCTCTCCCGTTACATC
AGGTTGAGAAGAGTGGTAAGGCGTGCGAGATGGAGGATCATCATGATGCT
ATGATGGCTCCGTCACCTTCGCCGGATCAGACACTACCAAGGAGACCGGA
GACAGCACGGTTGTCGTGTCCGAACGGGCAGGGGAAAGATATTACTATTC
GGACGGATATTCATGTTCGATGATCTTGAAGTTTCTCTGGTGTCCTTTTC
TTTCTTATATTTTTGTCTATACCATATTGTTCTTTGGGGTTCTCCTATTT
TTGGGGTGTGCAAGGGTGGGAAATAATCTCCGAAGGTGTTCATTACGGCT
GAACTTTCCTTTGTCTTCATTACTATACAGTGTATACATGATCAAAAAAT
TACAGAA back to topCoding sequence (CDS) from alignment at ch6:2468476..2470532- >KJC3_008597-T2 ID=KJC3_008597-T2|Name=KJC3_008597-T2|organism=Aspergillus niger KJC3|type=CDS|length=3978bp|location=Sequence derived from alignment at ch6:2468476..2470532- (Aspergillus niger KJC3)
TATCTGCGCCATGAACCTAACCCGCATCGTCTTCGCTGTCACCCTCGACA
TGACGGACGCGACCCATGCCATCGCACGCATCGGCCTCTTCTCCATCCTC
GAAGTCAACGTAGGTATGATCTGCGCCTCACTACCAACCCTCGGCCCGCT
CATCTTCGGCGACCATCGCGGTGGATCCTCTGGCGGACGGAAAGGCACTC
CTGACCCTCGCTCGTCCGCCGCCATCATGAACACCTTTGTGCGGCGCCGC
GCAGCAGGCCTGGGCCGGAGTGACGGCGGCAGCGGTCGGTTCAGTGAGAT
GGCCACGCTGAATGATAACACTGTTTTCGATGAGGAAGCTCTCCCGTTAC
ATCAGGTTGAGAAGAGTGGTAAGGCGTGCGAGATGGAGGATCATCATGAT
GCTATGATGGCTCCGTCACCTTCGCCGGATCAGACACTACCAAGGAGACC
GGAGACAGCACGGTTGTCGTGTCCGAACGGGCAGGGGAAAGATATTACTA
TTCGGACGGATATTCATGTTCGATGAATTGTCCTCGCCAGCGAATTCATC
TGGGCCATCGCCACCACCCTAGTCAAATTCTCCATCCTCAGTCTGTATCT
GGAGATTTTCCGCGGCAAGCTTTTCCGGGCCTCCTGCTACACAATCGGAG
CGCTCAGTCTGGCACTGGCAGCAGCCATGTTCCTGATCGCCGGCCTTCTC
TGCCAACCGATCGAGAAGAACTGGGACCCGCTGATGACGACGGGCCACTG
CGGCGACAGCGTCAAAATGGACGTCGCCACAGCCACCATCAACATGATTT
TGGACCTTTTTATCGTGATCCTGCCTCTCCCGTCGCTCTGGAAACTGCAA
ATGAGCTGGACCCGCAAGGCCATGCTGAGTGGGATTTTTAGTTTGGGTCT
TGTATGTGTAGGGACCCTGATCAGAGAATCCAACACTTTCCTTCATGTCT
CTTTTCTGATTGCGTTGAGCAGAGCTGCGTTTGTATTTCCCTTTCACTTG
CTTTCAATTGCGTTATGTCCAGTTCAGCCGCGCCCACGATGGACCAGTAT
CCCCTGGGTGGCCTATCTACAGGCCCAGGCAAGAGTGCCTTCGTCGTGAC
GATCATCTCCATGGTACTGGTCACCATCTGCGTTGGCCTTCGTGTCTGGC
TGAGCATCGTCAATCCGCGACCCTTTGGGTTCATGGGCTACTTCTACTAT
GCTGGTTATATCGTTGCTATGGCCTATTCAGCCCAATTTCTTTGGGGGAT
CTGCCCGAATGCCATTGGCATGCACATCATGACGGCTATGACCTTGTATC
CCGATCGGGTGGTCAATGCTTTGAAGTATCTGCGCCATGAACCTAACCCG
CATCGTCTTCGCTGTCACCCTCGACATGACGGACGCGACCCATGCCATCG
CACGCATCGGCCTCTTCTCCATCCTCGAAGTCAACGTAGGTATGATCTGC
GCCTCACTACCAACCCTCGGCCCGCTCATCTTCGGCGACCATCGCGGTGG
ATCCTCTGGCGGACGGAAAGGCACTCCTGACCCTCGCTCGTCCGCCGCCA
TCATGAACACCTTTGTGCGGCGCCGCGCAGCAGGCCTGGGCCGGAGTGAC
GGCGGCAGCGGTCGGTTCAGTGAGATGGCCACGCTGAATGATAACACTGT
TTTCGATGAGGAAGCTCTCCCGTTACATCAGGTTGAGAAGAGTGGTAAGG
CGTGCGAGATGGAGGATCATCATGATGCTATGATGGCTCCGTCACCTTCG
CCGGATCAGACACTACCAAGGAGACCGGAGACAGCACGGTTGTCGTGTCC
GAACGGGCAGGGGAAAGATATTACTATTCGGACGGATATTCATGTTCGAT
GAATTGTCCTCGCCAGCGAATTCATCTGGGCCATCGCCACCACCCTAGTC
AAATTCTCCATCCTCAGTCTGTATCTGGAGATTTTCCGCGGCAAGCTTTT
CCGGGCCTCCTGCTACACAATCGGAGCGCTCAGTCTGGCACTGGCAGCAG
CCATGTTCCTGATCGCCGGCCTTCTCTGCCAACCGATCGAGAAGAACTGG
GACCCGCTGATGACGACGGGCCACTGCGGCGACAGCGTCAAAATGGACGT
CGCCACAGCCACCATCAACATGATTTTGGACCTTTTTATCGTGATCCTGC
CTCTCCCGTCGCTCTGGAAACTGCAAATGAGCTGGACCCGCAAGGCCATG
CTGAGTGGGATTTTTAGTTTGGGTCTTGTATGTGTAGGGACCCTGATCAG
AGAATCCAACACTTTCCTTCATGTCTCTTTTCTGATTGCGTTGAGCAGAG
CTGCGTTTGTATTTCCCTTTCACTTGCTTTCAATTGCGTTATGTCCAGTT
CAGCCGCGCCCACGATGGACCAGTATCCCCTGGGTGGCCTATCTACAGGC
CCAGGCAAGAGTGCCTTCGTCGTGACGATCATCTCCATGGTACTGGTCAC
CATCTGCGTTGGCCTTCGTGTCTGGCTGAGCATCGTCAATCCGCGACCCT
TTGGGTTCATGGGCTACTTCTACTATGCTGGTTATATCGTTGCTATGGCC
TATTCAGCCCAATTTCTTTGGGGGATCTGCCCGAATGCCATTGGCATGCA
CATCATGACGGCTATGACCTTGTATCCCGATCGGGTGGTCAATGCTTTGA
AGTATCTGCGCCATGAACCTAACCCGCATCGTCTTCGCTGTCACCCTCGA
CATGACGGACGCGACCCATGCCATCGCACGCATCGGCCTCTTCTCCATCC
TCGAAGTCAACGTAGGTATGATCTGCGCCTCACTACCAACCCTCGGCCCG
CTCATCTTCGGCGACCATCGCGGTGGATCCTCTGGCGGACGGAAAGGCAC
TCCTGACCCTCGCTCGTCCGCCGCCATCATGAACACCTTTGTGCGGCGCC
GCGCAGCAGGCCTGGGCCGGAGTGACGGCGGCAGCGGTCGGTTCAGTGAG
ATGGCCACGCTGAATGATAACACTGTTTTCGATGAGGAAGCTCTCCCGTT
ACATCAGGTTGAGAAGAGTGGTAAGGCGTGCGAGATGGAGGATCATCATG
ATGCTATGATGGCTCCGTCACCTTCGCCGGATCAGACACTACCAAGGAGA
CCGGAGACAGCACGGTTGTCGTGTCCGAACGGGCAGGGGAAAGATATTAC
TATTCGGACGGATATTCATGTTCGATGAATTGTCCTCGCCAGCGAATTCA
TCTGGGCCATCGCCACCACCCTAGTCAAATTCTCCATCCTCAGTCTGTAT
CTGGAGATTTTCCGCGGCAAGCTTTTCCGGGCCTCCTGCTACACAATCGG
AGCGCTCAGTCTGGCACTGGCAGCAGCCATGTTCCTGATCGCCGGCCTTC
TCTGCCAACCGATCGAGAAGAACTGGGACCCGCTGATGACGACGGGCCAC
TGCGGCGACAGCGTCAAAATGGACGTCGCCACAGCCACCATCAACATGAT
TTTGGACCTTTTTATCGTGATCCTGCCTCTCCCGTCGCTCTGGAAACTGC
AAATGAGCTGGACCCGCAAGGCCATGCTGAGTGGGATTTTTAGTTTGGGT
CTTGTATGTGTAGGGACCCTGATCAGAGAATCCAACACTTTCCTTCATGT
CTCTTTTCTGATTGCGTTGAGCAGAGCTGCGTTTGTATTTCCCTTTCACT
TGCTTTCAATTGCGTTATGTCCAGTTCAGCCGCGCCCACGATGGACCAGT
ATCCCCTGGGTGGCCTATCTACAGGCCCAGGCAAGAGTGCCTTCGTCGTG
ACGATCATCTCCATGGTACTGGTCACCATCTGCGTTGGCCTTCGTGTCTG
GCTGAGCATCGTCAATCCGCGACCCTTTGGGTTCATGGGCTACTTCTACT
ATGCTGGTTATATCGTTGCTATGGCCTATTCAGCCCAATTTCTTTGGGGG
ATCTGCCCGAATGCCATTGGCATGCACATCATGACGGCTATGACCTTGTA
TCCCGATCGGGTGGTCAATGCTTTGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008597-T2.utr3p1 | KJC3_008597-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008597-T2.utr5p1 | KJC3_008597-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2468476..2470532 - |
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