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KJC3_008600-T1, KJC3_008600-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008600-T1
Unique NameKJC3_008600-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2477709..2479781-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008600-T1 ID=KJC3_008600-T1|Name=KJC3_008600-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2073bp|location=Sequence derived from alignment at ch6:2477709..2479781- (Aspergillus niger KJC3)
AAGCTATATAAGGGCTATCCACCAACTGGGCTCCAACAACCCAGACATTA TTTTGTTTGACTCTTTCAGCATATTTTCAACCACTACCATCATCATGGGA TCAGTATCCGAAGAATACCCGCCGCTTGCGGCTCTTCCCAATCTCAGTCT ACACCCATCCATTGACGCAGAACAGCTCTCTGCATCCAAGATCGCCAACG AATGGCTCGCTTCTTTCTCAAAGAGCCTTTCTACGGGTCGTGCAGACGCT ATCCAAGCCCACTTCCTGGAGAAGGAATCTTGGTGGCGCGATTTTATCTC CTTCTCATGGGACATTGCATGCCATAACGGGTCCCAGGCCATCTCCGACT ACCTCGCCAGCTCCACAAGTGACTTTTCAGACCCGACACTGGACCAGCCA GGCGCATTGCAACCGCACTTGGCTGACCTGGGGGGTATGCGCTTCATCCA GGCCGGGTTTGGGTTCAAGAACAAGTCCGGCAAGGGGAGGGGTGTTCTTC GCCTGGCGAATGTGGGGCCCGAAGAGTGGAAGGCGTGGACAGTATTCACC GTGCTTGAGCGCCTGAATGGACAAGACGAGCTGGAAGCACAGAGGGTGAA GGCAGCCGGAATCCAGTCAAGTGGATCTGGGCCCCAACCGACCAACGAGG ACAGCGATCTGCAAGTCTTGGTCGTAGGAGCAGGTCAATCGGGTCTTGCT CTAGCCGCACACCTACAGAACCTGGGCCTTAAATATCTAGTCGTCGACAA AACTGCCCGTCCTGGAGACTCATGGCGTGCCAGGTACGCGTCAATCAAAT CACACACCCCGAGCTACACGGACCACTATCCGTTCTTGAAATACCCCACC AATTGGCCGCGCTACCTCGACCAAGGGCACATTGTCAAATGGATGGAGCA CTACGGAGATCTTCTGGCTCTTAATATCAGACATGGCACGCTAGCCACGA ATATTAACTACAACGAGTCGACCAAGCGGTACTCGGTCGACCTCCAATCC ACCGAGGGCGGCGTACAGAACATCACCACCAAGCACCTCGTCCTTGCCAC GGGCCTACTCAGCGATGTCCCCATCAAGCCCGCCTTCCCCGGTGAGGACA CATTCAAGGGTCAGATCTTCCACACATCGGCGCATCAGTCCGCGAGCTTG ATGCCCGACCTGCAGAACAAGCAAATCACAATCATCGGCTCCGGAACAAG CGCACACGACGTCGCCCAGGACTTCGCCAGTCACGGAGCGAAATCAGTCA CGATCGTGCAGCGCAGTCCTATTTTCGTGACGTCTCTCAAGTCCCTAGAG GAGCTGCAGGTGAAGCTGTGGGATACGCCGGGCTTGAACACCGAGGATGC GGATCTTCTTGGTAACTCATTCTCGACGGCCGTTGTTCGGACTCTTAGCG TTGGGGCGTCGCAGATGATGTCCATGTTAGATAAGGACATGTTAGAGGGG CTGGAAAAGGCCGGAATGGCCGTCAAGAGGGGCGACCAGGGCGACAGTCT CGTTGATCATCAGCTGATCAAAGCGGGTCATTTCTACATTGACCAGGGAG CATGCGGGATGATTATCGATGGCCGTATTCAGGTGCGGAGATGTCAGGAA GGCGTCCGGGAATATTACCCAGACGGAATTACTCTCGCCGATGGTACTCA GGTCGAGTCGGATGTTGTTATTCTTGCCACGGGCTTCGAACGCATAGACA AGGCGATCGAGCGAATCGTGCCTAAGGAGATCCTGGACAGGGTGCCGGGT GTGATATGTAGCTTGGATGAAAGCCAGGAACGGTTTGGTGTAAGTTCACA TACTGTCCCTCATTTTGCAGTCACAGATGGCTAACAGATCGCTTGTAGGT ATGGAGACCGACTGGCATGCCAGGATTCTGGTACATGACGGGCAGCTTTC TCTGGTCGAGACAGTTCTCTCCTGTCCTGGCTTTGCAGATTGCCGCTGTC GAGTGGGGGCTGAACAAGGAGTATCAATGGTAAAACGAAGGGTTATTTGT GATATAGACTTGATAGTATTTCAGAATTTTACTGCTATGATAGGTATCCA CGATAGATGTTTTTAAATTCAAG
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Coding sequence (CDS) from alignment at ch6:2477709..2479781-

>KJC3_008600-T1 ID=KJC3_008600-T1|Name=KJC3_008600-T1|organism=Aspergillus niger KJC3|type=CDS|length=3660bp|location=Sequence derived from alignment at ch6:2477709..2479781- (Aspergillus niger KJC3)
GTATGGAGACCGACTGGCATGCCAGGATTCTGGTACATGACGGGCAGCTT
TCTCTGGTCGAGACAGTTCTCTCCTGTCCTGGCTTTGCAGATTGCCGCTG
TCGAGTGGGGGCTGAACAAGGAGTATCAATGGTAAATGGGATCAGTATCC
GAAGAATACCCGCCGCTTGCGGCTCTTCCCAATCTCAGTCTACACCCATC
CATTGACGCAGAACAGCTCTCTGCATCCAAGATCGCCAACGAATGGCTCG
CTTCTTTCTCAAAGAGCCTTTCTACGGGTCGTGCAGACGCTATCCAAGCC
CACTTCCTGGAGAAGGAATCTTGGTGGCGCGATTTTATCTCCTTCTCATG
GGACATTGCATGCCATAACGGGTCCCAGGCCATCTCCGACTACCTCGCCA
GCTCCACAAGTGACTTTTCAGACCCGACACTGGACCAGCCAGGCGCATTG
CAACCGCACTTGGCTGACCTGGGGGGTATGCGCTTCATCCAGGCCGGGTT
TGGGTTCAAGAACAAGTCCGGCAAGGGGAGGGGTGTTCTTCGCCTGGCGA
ATGTGGGGCCCGAAGAGTGGAAGGCGTGGACAGTATTCACCGTGCTTGAG
CGCCTGAATGGACAAGACGAGCTGGAAGCACAGAGGGTGAAGGCAGCCGG
AATCCAGTCAAGTGGATCTGGGCCCCAACCGACCAACGAGGACAGCGATC
TGCAAGTCTTGGTCGTAGGAGCAGGTCAATCGGGTCTTGCTCTAGCCGCA
CACCTACAGAACCTGGGCCTTAAATATCTAGTCGTCGACAAAACTGCCCG
TCCTGGAGACTCATGGCGTGCCAGGTACGCGTCAATCAAATCACACACCC
CGAGCTACACGGACCACTATCCGTTCTTGAAATACCCCACCAATTGGCCG
CGCTACCTCGACCAAGGGCACATTGTCAAATGGATGGAGCACTACGGAGA
TCTTCTGGCTCTTAATATCAGACATGGCACGCTAGCCACGAATATTAACT
ACAACGAGTCGACCAAGCGGTACTCGGTCGACCTCCAATCCACCGAGGGC
GGCGTACAGAACATCACCACCAAGCACCTCGTCCTTGCCACGGGCCTACT
CAGCGATGTCCCCATCAAGCCCGCCTTCCCCGGTGAGGACACATTCAAGG
GTCAGATCTTCCACACATCGGCGCATCAGTCCGCGAGCTTGATGCCCGAC
CTGCAGAACAAGCAAATCACAATCATCGGCTCCGGAACAAGCGCACACGA
CGTCGCCCAGGACTTCGCCAGTCACGGAGCGAAATCAGTCACGATCGTGC
AGCGCAGTCCTATTTTCGTGACGTCTCTCAAGTCCCTAGAGGAGCTGCAG
GTGAAGCTGTGGGATACGCCGGGCTTGAACACCGAGGATGCGGATCTTCT
TGGTAACTCATTCTCGACGGCCGTTGTTCGGACTCTTAGCGTTGGGGCGT
CGCAGATGATGTCCATGTTAGATAAGGACATGTTAGAGGGGCTGGAAAAG
GCCGGAATGGCCGTCAAGAGGGGCGACCAGGGCGACAGTCTCGTTGATCA
TCAGCTGATCAAAGCGGGTCATTTCTACATTGACCAGGGAGCATGCGGGA
TGATTATCGATGGCCGTATTCAGGTGCGGAGATGTCAGGAAGGCGTCCGG
GAATATTACCCAGACGGAATTACTCTCGCCGATGGTACTCAGGTCGAGTC
GGATGTTGTTATTCTTGCCACGGGCTTCGAACGCATAGACAAGGCGATCG
AGCGAATCGTGCCTAAGGAGATCCTGGACAGGGTGCCGGGTGTGATATGT
AGCTTGGATGAAAGCCAGGAACGGTTTGGTGTATGGAGACCGACTGGCAT
GCCAGGATTCTGGTACATGACGGGCAGCTTTCTCTGGTCGAGACAGTTCT
CTCCTGTCCTGGCTTTGCAGATTGCCGCTGTCGAGTGGGGGCTGAACAAG
GAGTATCAATGGTAAATGGGATCAGTATCCGAAGAATACCCGCCGCTTGC
GGCTCTTCCCAATCTCAGTCTACACCCATCCATTGACGCAGAACAGCTCT
CTGCATCCAAGATCGCCAACGAATGGCTCGCTTCTTTCTCAAAGAGCCTT
TCTACGGGTCGTGCAGACGCTATCCAAGCCCACTTCCTGGAGAAGGAATC
TTGGTGGCGCGATTTTATCTCCTTCTCATGGGACATTGCATGCCATAACG
GGTCCCAGGCCATCTCCGACTACCTCGCCAGCTCCACAAGTGACTTTTCA
GACCCGACACTGGACCAGCCAGGCGCATTGCAACCGCACTTGGCTGACCT
GGGGGGTATGCGCTTCATCCAGGCCGGGTTTGGGTTCAAGAACAAGTCCG
GCAAGGGGAGGGGTGTTCTTCGCCTGGCGAATGTGGGGCCCGAAGAGTGG
AAGGCGTGGACAGTATTCACCGTGCTTGAGCGCCTGAATGGACAAGACGA
GCTGGAAGCACAGAGGGTGAAGGCAGCCGGAATCCAGTCAAGTGGATCTG
GGCCCCAACCGACCAACGAGGACAGCGATCTGCAAGTCTTGGTCGTAGGA
GCAGGTCAATCGGGTCTTGCTCTAGCCGCACACCTACAGAACCTGGGCCT
TAAATATCTAGTCGTCGACAAAACTGCCCGTCCTGGAGACTCATGGCGTG
CCAGGTACGCGTCAATCAAATCACACACCCCGAGCTACACGGACCACTAT
CCGTTCTTGAAATACCCCACCAATTGGCCGCGCTACCTCGACCAAGGGCA
CATTGTCAAATGGATGGAGCACTACGGAGATCTTCTGGCTCTTAATATCA
GACATGGCACGCTAGCCACGAATATTAACTACAACGAGTCGACCAAGCGG
TACTCGGTCGACCTCCAATCCACCGAGGGCGGCGTACAGAACATCACCAC
CAAGCACCTCGTCCTTGCCACGGGCCTACTCAGCGATGTCCCCATCAAGC
CCGCCTTCCCCGGTGAGGACACATTCAAGGGTCAGATCTTCCACACATCG
GCGCATCAGTCCGCGAGCTTGATGCCCGACCTGCAGAACAAGCAAATCAC
AATCATCGGCTCCGGAACAAGCGCACACGACGTCGCCCAGGACTTCGCCA
GTCACGGAGCGAAATCAGTCACGATCGTGCAGCGCAGTCCTATTTTCGTG
ACGTCTCTCAAGTCCCTAGAGGAGCTGCAGGTGAAGCTGTGGGATACGCC
GGGCTTGAACACCGAGGATGCGGATCTTCTTGGTAACTCATTCTCGACGG
CCGTTGTTCGGACTCTTAGCGTTGGGGCGTCGCAGATGATGTCCATGTTA
GATAAGGACATGTTAGAGGGGCTGGAAAAGGCCGGAATGGCCGTCAAGAG
GGGCGACCAGGGCGACAGTCTCGTTGATCATCAGCTGATCAAAGCGGGTC
ATTTCTACATTGACCAGGGAGCATGCGGGATGATTATCGATGGCCGTATT
CAGGTGCGGAGATGTCAGGAAGGCGTCCGGGAATATTACCCAGACGGAAT
TACTCTCGCCGATGGTACTCAGGTCGAGTCGGATGTTGTTATTCTTGCCA
CGGGCTTCGAACGCATAGACAAGGCGATCGAGCGAATCGTGCCTAAGGAG
ATCCTGGACAGGGTGCCGGGTGTGATATGTAGCTTGGATGAAAGCCAGGA
ACGGTTTGGT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008600KJC3_008600Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008600-T1KJC3_008600-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008600-T1.cdsKJC3_008600-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008600-T1.utr3p1KJC3_008600-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008600-T1.exon2KJC3_008600-T1.exon2Aspergillus niger KJC3exon
KJC3_008600-T1.exon1KJC3_008600-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008600-T1.utr5p1KJC3_008600-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13738
DBxrefPFAM:PF07992
DBxrefPFAM:PF00743
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2477709..2479781 -