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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2477709..2479781- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008600-T1 ID=KJC3_008600-T1|Name=KJC3_008600-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2073bp|location=Sequence derived from alignment at ch6:2477709..2479781- (Aspergillus niger KJC3) AAGCTATATAAGGGCTATCCACCAACTGGGCTCCAACAACCCAGACATTA
TTTTGTTTGACTCTTTCAGCATATTTTCAACCACTACCATCATCATGGGA
TCAGTATCCGAAGAATACCCGCCGCTTGCGGCTCTTCCCAATCTCAGTCT
ACACCCATCCATTGACGCAGAACAGCTCTCTGCATCCAAGATCGCCAACG
AATGGCTCGCTTCTTTCTCAAAGAGCCTTTCTACGGGTCGTGCAGACGCT
ATCCAAGCCCACTTCCTGGAGAAGGAATCTTGGTGGCGCGATTTTATCTC
CTTCTCATGGGACATTGCATGCCATAACGGGTCCCAGGCCATCTCCGACT
ACCTCGCCAGCTCCACAAGTGACTTTTCAGACCCGACACTGGACCAGCCA
GGCGCATTGCAACCGCACTTGGCTGACCTGGGGGGTATGCGCTTCATCCA
GGCCGGGTTTGGGTTCAAGAACAAGTCCGGCAAGGGGAGGGGTGTTCTTC
GCCTGGCGAATGTGGGGCCCGAAGAGTGGAAGGCGTGGACAGTATTCACC
GTGCTTGAGCGCCTGAATGGACAAGACGAGCTGGAAGCACAGAGGGTGAA
GGCAGCCGGAATCCAGTCAAGTGGATCTGGGCCCCAACCGACCAACGAGG
ACAGCGATCTGCAAGTCTTGGTCGTAGGAGCAGGTCAATCGGGTCTTGCT
CTAGCCGCACACCTACAGAACCTGGGCCTTAAATATCTAGTCGTCGACAA
AACTGCCCGTCCTGGAGACTCATGGCGTGCCAGGTACGCGTCAATCAAAT
CACACACCCCGAGCTACACGGACCACTATCCGTTCTTGAAATACCCCACC
AATTGGCCGCGCTACCTCGACCAAGGGCACATTGTCAAATGGATGGAGCA
CTACGGAGATCTTCTGGCTCTTAATATCAGACATGGCACGCTAGCCACGA
ATATTAACTACAACGAGTCGACCAAGCGGTACTCGGTCGACCTCCAATCC
ACCGAGGGCGGCGTACAGAACATCACCACCAAGCACCTCGTCCTTGCCAC
GGGCCTACTCAGCGATGTCCCCATCAAGCCCGCCTTCCCCGGTGAGGACA
CATTCAAGGGTCAGATCTTCCACACATCGGCGCATCAGTCCGCGAGCTTG
ATGCCCGACCTGCAGAACAAGCAAATCACAATCATCGGCTCCGGAACAAG
CGCACACGACGTCGCCCAGGACTTCGCCAGTCACGGAGCGAAATCAGTCA
CGATCGTGCAGCGCAGTCCTATTTTCGTGACGTCTCTCAAGTCCCTAGAG
GAGCTGCAGGTGAAGCTGTGGGATACGCCGGGCTTGAACACCGAGGATGC
GGATCTTCTTGGTAACTCATTCTCGACGGCCGTTGTTCGGACTCTTAGCG
TTGGGGCGTCGCAGATGATGTCCATGTTAGATAAGGACATGTTAGAGGGG
CTGGAAAAGGCCGGAATGGCCGTCAAGAGGGGCGACCAGGGCGACAGTCT
CGTTGATCATCAGCTGATCAAAGCGGGTCATTTCTACATTGACCAGGGAG
CATGCGGGATGATTATCGATGGCCGTATTCAGGTGCGGAGATGTCAGGAA
GGCGTCCGGGAATATTACCCAGACGGAATTACTCTCGCCGATGGTACTCA
GGTCGAGTCGGATGTTGTTATTCTTGCCACGGGCTTCGAACGCATAGACA
AGGCGATCGAGCGAATCGTGCCTAAGGAGATCCTGGACAGGGTGCCGGGT
GTGATATGTAGCTTGGATGAAAGCCAGGAACGGTTTGGTGTAAGTTCACA
TACTGTCCCTCATTTTGCAGTCACAGATGGCTAACAGATCGCTTGTAGGT
ATGGAGACCGACTGGCATGCCAGGATTCTGGTACATGACGGGCAGCTTTC
TCTGGTCGAGACAGTTCTCTCCTGTCCTGGCTTTGCAGATTGCCGCTGTC
GAGTGGGGGCTGAACAAGGAGTATCAATGGTAAAACGAAGGGTTATTTGT
GATATAGACTTGATAGTATTTCAGAATTTTACTGCTATGATAGGTATCCA
CGATAGATGTTTTTAAATTCAAG back to topCoding sequence (CDS) from alignment at ch6:2477709..2479781- >KJC3_008600-T1 ID=KJC3_008600-T1|Name=KJC3_008600-T1|organism=Aspergillus niger KJC3|type=CDS|length=3660bp|location=Sequence derived from alignment at ch6:2477709..2479781- (Aspergillus niger KJC3) GTATGGAGACCGACTGGCATGCCAGGATTCTGGTACATGACGGGCAGCTT TCTCTGGTCGAGACAGTTCTCTCCTGTCCTGGCTTTGCAGATTGCCGCTG TCGAGTGGGGGCTGAACAAGGAGTATCAATGGTAAATGGGATCAGTATCC GAAGAATACCCGCCGCTTGCGGCTCTTCCCAATCTCAGTCTACACCCATC CATTGACGCAGAACAGCTCTCTGCATCCAAGATCGCCAACGAATGGCTCG CTTCTTTCTCAAAGAGCCTTTCTACGGGTCGTGCAGACGCTATCCAAGCC CACTTCCTGGAGAAGGAATCTTGGTGGCGCGATTTTATCTCCTTCTCATG GGACATTGCATGCCATAACGGGTCCCAGGCCATCTCCGACTACCTCGCCA GCTCCACAAGTGACTTTTCAGACCCGACACTGGACCAGCCAGGCGCATTG CAACCGCACTTGGCTGACCTGGGGGGTATGCGCTTCATCCAGGCCGGGTT TGGGTTCAAGAACAAGTCCGGCAAGGGGAGGGGTGTTCTTCGCCTGGCGA ATGTGGGGCCCGAAGAGTGGAAGGCGTGGACAGTATTCACCGTGCTTGAG CGCCTGAATGGACAAGACGAGCTGGAAGCACAGAGGGTGAAGGCAGCCGG AATCCAGTCAAGTGGATCTGGGCCCCAACCGACCAACGAGGACAGCGATC TGCAAGTCTTGGTCGTAGGAGCAGGTCAATCGGGTCTTGCTCTAGCCGCA CACCTACAGAACCTGGGCCTTAAATATCTAGTCGTCGACAAAACTGCCCG TCCTGGAGACTCATGGCGTGCCAGGTACGCGTCAATCAAATCACACACCC CGAGCTACACGGACCACTATCCGTTCTTGAAATACCCCACCAATTGGCCG CGCTACCTCGACCAAGGGCACATTGTCAAATGGATGGAGCACTACGGAGA TCTTCTGGCTCTTAATATCAGACATGGCACGCTAGCCACGAATATTAACT ACAACGAGTCGACCAAGCGGTACTCGGTCGACCTCCAATCCACCGAGGGC GGCGTACAGAACATCACCACCAAGCACCTCGTCCTTGCCACGGGCCTACT CAGCGATGTCCCCATCAAGCCCGCCTTCCCCGGTGAGGACACATTCAAGG GTCAGATCTTCCACACATCGGCGCATCAGTCCGCGAGCTTGATGCCCGAC CTGCAGAACAAGCAAATCACAATCATCGGCTCCGGAACAAGCGCACACGA CGTCGCCCAGGACTTCGCCAGTCACGGAGCGAAATCAGTCACGATCGTGC AGCGCAGTCCTATTTTCGTGACGTCTCTCAAGTCCCTAGAGGAGCTGCAG GTGAAGCTGTGGGATACGCCGGGCTTGAACACCGAGGATGCGGATCTTCT TGGTAACTCATTCTCGACGGCCGTTGTTCGGACTCTTAGCGTTGGGGCGT CGCAGATGATGTCCATGTTAGATAAGGACATGTTAGAGGGGCTGGAAAAG GCCGGAATGGCCGTCAAGAGGGGCGACCAGGGCGACAGTCTCGTTGATCA TCAGCTGATCAAAGCGGGTCATTTCTACATTGACCAGGGAGCATGCGGGA TGATTATCGATGGCCGTATTCAGGTGCGGAGATGTCAGGAAGGCGTCCGG GAATATTACCCAGACGGAATTACTCTCGCCGATGGTACTCAGGTCGAGTC GGATGTTGTTATTCTTGCCACGGGCTTCGAACGCATAGACAAGGCGATCG AGCGAATCGTGCCTAAGGAGATCCTGGACAGGGTGCCGGGTGTGATATGT AGCTTGGATGAAAGCCAGGAACGGTTTGGTGTATGGAGACCGACTGGCAT GCCAGGATTCTGGTACATGACGGGCAGCTTTCTCTGGTCGAGACAGTTCT CTCCTGTCCTGGCTTTGCAGATTGCCGCTGTCGAGTGGGGGCTGAACAAG GAGTATCAATGGTAAATGGGATCAGTATCCGAAGAATACCCGCCGCTTGC GGCTCTTCCCAATCTCAGTCTACACCCATCCATTGACGCAGAACAGCTCT CTGCATCCAAGATCGCCAACGAATGGCTCGCTTCTTTCTCAAAGAGCCTT TCTACGGGTCGTGCAGACGCTATCCAAGCCCACTTCCTGGAGAAGGAATC TTGGTGGCGCGATTTTATCTCCTTCTCATGGGACATTGCATGCCATAACG GGTCCCAGGCCATCTCCGACTACCTCGCCAGCTCCACAAGTGACTTTTCA GACCCGACACTGGACCAGCCAGGCGCATTGCAACCGCACTTGGCTGACCT GGGGGGTATGCGCTTCATCCAGGCCGGGTTTGGGTTCAAGAACAAGTCCG GCAAGGGGAGGGGTGTTCTTCGCCTGGCGAATGTGGGGCCCGAAGAGTGG AAGGCGTGGACAGTATTCACCGTGCTTGAGCGCCTGAATGGACAAGACGA GCTGGAAGCACAGAGGGTGAAGGCAGCCGGAATCCAGTCAAGTGGATCTG GGCCCCAACCGACCAACGAGGACAGCGATCTGCAAGTCTTGGTCGTAGGA GCAGGTCAATCGGGTCTTGCTCTAGCCGCACACCTACAGAACCTGGGCCT TAAATATCTAGTCGTCGACAAAACTGCCCGTCCTGGAGACTCATGGCGTG CCAGGTACGCGTCAATCAAATCACACACCCCGAGCTACACGGACCACTAT CCGTTCTTGAAATACCCCACCAATTGGCCGCGCTACCTCGACCAAGGGCA CATTGTCAAATGGATGGAGCACTACGGAGATCTTCTGGCTCTTAATATCA GACATGGCACGCTAGCCACGAATATTAACTACAACGAGTCGACCAAGCGG TACTCGGTCGACCTCCAATCCACCGAGGGCGGCGTACAGAACATCACCAC CAAGCACCTCGTCCTTGCCACGGGCCTACTCAGCGATGTCCCCATCAAGC CCGCCTTCCCCGGTGAGGACACATTCAAGGGTCAGATCTTCCACACATCG GCGCATCAGTCCGCGAGCTTGATGCCCGACCTGCAGAACAAGCAAATCAC AATCATCGGCTCCGGAACAAGCGCACACGACGTCGCCCAGGACTTCGCCA GTCACGGAGCGAAATCAGTCACGATCGTGCAGCGCAGTCCTATTTTCGTG ACGTCTCTCAAGTCCCTAGAGGAGCTGCAGGTGAAGCTGTGGGATACGCC GGGCTTGAACACCGAGGATGCGGATCTTCTTGGTAACTCATTCTCGACGG CCGTTGTTCGGACTCTTAGCGTTGGGGCGTCGCAGATGATGTCCATGTTA GATAAGGACATGTTAGAGGGGCTGGAAAAGGCCGGAATGGCCGTCAAGAG GGGCGACCAGGGCGACAGTCTCGTTGATCATCAGCTGATCAAAGCGGGTC ATTTCTACATTGACCAGGGAGCATGCGGGATGATTATCGATGGCCGTATT CAGGTGCGGAGATGTCAGGAAGGCGTCCGGGAATATTACCCAGACGGAAT TACTCTCGCCGATGGTACTCAGGTCGAGTCGGATGTTGTTATTCTTGCCA CGGGCTTCGAACGCATAGACAAGGCGATCGAGCGAATCGTGCCTAAGGAG ATCCTGGACAGGGTGCCGGGTGTGATATGTAGCTTGGATGAAAGCCAGGA ACGGTTTGGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008600-T1.utr3p1 | KJC3_008600-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008600-T1.utr5p1 | KJC3_008600-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036188 |
DBxref | PFAM:PF13738 |
DBxref | PFAM:PF07992 |
DBxref | PFAM:PF00743 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2477709..2479781 - |
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