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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2505039..2507225- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008611-T1 ID=KJC3_008611-T1|Name=KJC3_008611-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2187bp|location=Sequence derived from alignment at ch6:2505039..2507225- (Aspergillus niger KJC3)
ATCAAAACATACTTTCGGCTCCACGTTTGCAGCTCCAACTCCACGCTCGG
ACACGATGTGGCTAATAAGCTAGGCTTCATTACACAGACAAGTTCTACCC
CACGGGGTACTTGGAACCATCAGGATGGAAGGCATATGAAGGCCGGGAGG
GAGCACTGCTTAGTCCATTCCCCCGTCCTTTATTGATTAAGGGTAGTAGG
ACACAGCTCCTGCAAAGACAAGCCAAATGTCTGCACATAGCAATATGGAT
GACAAGGACATCGACGCAACGCACCATGAACTCGCTATGGAGAAATCCTT
AAAGCATCATGGCAAAGGCAGTAACCCAACCGGCACAGTGAAATTAGTCG
AGGATGGAGAAATAGTGTTGATTCCGACGCCGTCTCCGGATCCAAGAGGT
TTGATTCCTTCACAACCTGTTCGAGAATATCATATGGCTAACGAACAGTG
AAACAGATCCCTTGAACTACCCTCAATGGCAAAAATGGATAATCACGTTC
GTGCTGGGATTGTGTACGCTCCATCCCTTCCCTCACTAGACAAACCACCA
TCTAATACGATCAATCTAGTCTCCGTCCTCGGTGTTCTAATGACCTCCGG
AATGGGCCCCTTCGTCACTTTAATGGAAGCCTACTACGACTACAGCCCCC
GAACCGACGATCTAATGACCTACCCAACCCTCTTTATGGGAATAGGGAAC
ATCATCGCTATGCCACTCGCCATGGCAATCGGCAGACGCCCAGTATTCCT
AGGCTCTGCATTGATCCTGACCGTGGGATCAATATGGTGCGCTGCGAGCA
CAAGTCTTTCGTCGCATATAGCGGGAAGAGATGTGTTATCGTTGGCAGCA
GGGCAATCAGAAGCCTTATGTCCTCTTATCATCCAGGTACATCCACATCC
CCATCCCATATCCTATGCTTCATAGACCGAATAATCTAATCAACATAATC
CAGGAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAG
TGCCATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACC
TAGTAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCC
AGCGGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTA
TGACCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACG
GCGAAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTA
GACTTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCAT
GCACCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGG
GACAATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGC
GTCTCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCT
AGGAGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGG
GCGGGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGC
GGCGATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGT
TGAGTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGC
TTATTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGG
TCGCCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATAT
AGGAATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGC
GAGCGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCT
TTTGGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCA
GGGTGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTG
GAATTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAA
TATGCGGTGGATGGGAGGAGTGCGGAGTTTTGATTGAGATGCTATGGGTT
GTTTTGTTGAGTTTGTTGATACGACGTAGCTATTTGATGTGACGTTTGAA
GCTGGATTCGGTTTATTTAACTTGAAATATATTGGGTGGGGGTTTAACAT
ATATCCAGCACATAGCTCTGTCTATCAGAATGACACC back to topCoding sequence (CDS) from alignment at ch6:2505039..2507225- >KJC3_008611-T1 ID=KJC3_008611-T1|Name=KJC3_008611-T1|organism=Aspergillus niger KJC3|type=CDS|length=6504bp|location=Sequence derived from alignment at ch6:2505039..2507225- (Aspergillus niger KJC3)
GAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAGTGC
CATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACCTAG
TAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCCAGC
GGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTATGA
CCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACGGCG
AAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTAGAC
TTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCATGCA
CCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGGGAC
AATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGCGTC
TCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCTAGG
AGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGGGCG
GGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGCGGC
GATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGTTGA
GTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGCTTA
TTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGGTCG
CCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATATAGG
AATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGCGAG
CGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCTTTT
GGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCAGGG
TGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTGGAA
TTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAATAT
GCGGTGGATGGGAGGAGTGCGGAGTTTTGATCTCCGTCCTCGGTGTTCTA
ATGACCTCCGGAATGGGCCCCTTCGTCACTTTAATGGAAGCCTACTACGA
CTACAGCCCCCGAACCGACGATCTAATGACCTACCCAACCCTCTTTATGG
GAATAGGGAACATCATCGCTATGCCACTCGCCATGGCAATCGGCAGACGC
CCAGTATTCCTAGGCTCTGCATTGATCCTGACCGTGGGATCAATATGGTG
CGCTGCGAGCACAAGTCTTTCGTCGCATATAGCGGGAAGAGATGTGTTAT
CGTTGGCAGCAGGGCAATCAGAAGCCTTATGTCCTCTTATCATCCAGATC
CCTTGAACTACCCTCAATGGCAAAAATGGATAATCACGTTCGTGCTGGGA
TTGTATGTCTGCACATAGCAATATGGATGACAAGGACATCGACGCAACGC
ACCATGAACTCGCTATGGAGAAATCCTTAAAGCATCATGGCAAAGGCAGT
AACCCAACCGGCACAGTGAAATTAGTCGAGGATGGAGAAATAGTGTTGAT
TCCGACGCCGTCTCCGGATCCAAGAGGAAATCCACTTCGTCCACGAACGC
AGCAGCCGACTCGCCTGGTTCAGTGCCATCCAATCCATCGGCACCGCCGC
CTTAACCATCGCCACATCCTACCTAGTAAGTAGCCTGGGCTGGAGATGGT
GGTACGGGGTATTCTCCATCGCCAGCGGACTAGTCTTCATCGGCGCATTC
ACCCTAGTCCCCGAATCCCGCTATGACCGACCAACCGACGCCTTCGAAGG
CGAAGTGCACATCCATCACGACGGCGAAGAGCAAGCCGTCATCCACGCAA
CCACCAAGAACCGCGTACCCCTAGACTTCACCAACTACCAAGCCCGCACC
TGGAAACACACTCTCAAAATCATGCACCCACCAGCGAACTGGGAAGAAGC
CCTAACATGCTACAAGCAAATGGGACAATGCATCCTGTTCCCTAACATCC
TCTGGGTGGTCCTAATGAACAGCGTCTCCCTCGGCATCTACGTTATCGGA
GTGACAGAATACTCCTCCATCCTAGGAGCCCCTCCATACAATTACCCAAC
AACAAGCCTAGGCCTAGTCCAGGGCGGGCAAATCGTGGTAGCGATGATAA
TGGTTCCCGTACTCGGCTACGGCGGCGATCAGCTATACAAATGGGTCGCG
AGCCGTCGAGGGAACGGCACCGTTGAGTCCGAGATTCGGCTCATCCCGAT
GCTATTGCCGATTGTCGTACTGCTTATTTCATGCGTTATCTTTGGCCGTG
CTGGATCTCATCCTACGGAGTGGTCGCCGTGGGCGATTACCACTACCTTT
AGCGGGATGTATTTCGCTTATATAGGAATTATTCTCAACGGGTACACGTA
TTCGTTGGATAGTTATGGAGAGCGAGCGGCGCCAATTCTGGTTCTGATTT
GTGCCATTCGCGGGTTTATTTCTTTTGGGATCTCGTTTGGGATTACGAAG
TTCGTGACTGAGAAGGGGTTCCAGGGTGCTTTGGATATTTGTGCGATCAT
TGCGGGTGTTGTGGCGGCGCTTGGAATTCCGGTTTTTGTCTTTGGGGCCT
GGATTAGAAGGGTTACGATGAAATATGCGGTGGATGGGAGGAGTGCGGAG
TTTTGATCTCCGTCCTCGGTGTTCTAATGACCTCCGGAATGGGCCCCTTC
GTCACTTTAATGGAAGCCTACTACGACTACAGCCCCCGAACCGACGATCT
AATGACCTACCCAACCCTCTTTATGGGAATAGGGAACATCATCGCTATGC
CACTCGCCATGGCAATCGGCAGACGCCCAGTATTCCTAGGCTCTGCATTG
ATCCTGACCGTGGGATCAATATGGTGCGCTGCGAGCACAAGTCTTTCGTC
GCATATAGCGGGAAGAGATGTGTTATCGTTGGCAGCAGGGCAATCAGAAG
CCTTATGTCCTCTTATCATCCAGATCCCTTGAACTACCCTCAATGGCAAA
AATGGATAATCACGTTCGTGCTGGGATTGTATGTCTGCACATAGCAATAT
GGATGACAAGGACATCGACGCAACGCACCATGAACTCGCTATGGAGAAAT
CCTTAAAGCATCATGGCAAAGGCAGTAACCCAACCGGCACAGTGAAATTA
GTCGAGGATGGAGAAATAGTGTTGATTCCGACGCCGTCTCCGGATCCAAG
AGGAAATCCACTTCGTCCACGAACGCAGCAGCCGACTCGCCTGGTTCAGT
GCCATCCAATCCATCGGCACCGCCGCCTTAACCATCGCCACATCCTACCT
AGTAAGTAGCCTGGGCTGGAGATGGTGGTACGGGGTATTCTCCATCGCCA
GCGGACTAGTCTTCATCGGCGCATTCACCCTAGTCCCCGAATCCCGCTAT
GACCGACCAACCGACGCCTTCGAAGGCGAAGTGCACATCCATCACGACGG
CGAAGAGCAAGCCGTCATCCACGCAACCACCAAGAACCGCGTACCCCTAG
ACTTCACCAACTACCAAGCCCGCACCTGGAAACACACTCTCAAAATCATG
CACCCACCAGCGAACTGGGAAGAAGCCCTAACATGCTACAAGCAAATGGG
ACAATGCATCCTGTTCCCTAACATCCTCTGGGTGGTCCTAATGAACAGCG
TCTCCCTCGGCATCTACGTTATCGGAGTGACAGAATACTCCTCCATCCTA
GGAGCCCCTCCATACAATTACCCAACAACAAGCCTAGGCCTAGTCCAGGG
CGGGCAAATCGTGGTAGCGATGATAATGGTTCCCGTACTCGGCTACGGCG
GCGATCAGCTATACAAATGGGTCGCGAGCCGTCGAGGGAACGGCACCGTT
GAGTCCGAGATTCGGCTCATCCCGATGCTATTGCCGATTGTCGTACTGCT
TATTTCATGCGTTATCTTTGGCCGTGCTGGATCTCATCCTACGGAGTGGT
CGCCGTGGGCGATTACCACTACCTTTAGCGGGATGTATTTCGCTTATATA
GGAATTATTCTCAACGGGTACACGTATTCGTTGGATAGTTATGGAGAGCG
AGCGGCGCCAATTCTGGTTCTGATTTGTGCCATTCGCGGGTTTATTTCTT
TTGGGATCTCGTTTGGGATTACGAAGTTCGTGACTGAGAAGGGGTTCCAG
GGTGCTTTGGATATTTGTGCGATCATTGCGGGTGTTGTGGCGGCGCTTGG
AATTCCGGTTTTTGTCTTTGGGGCCTGGATTAGAAGGGTTACGATGAAAT
ATGCGGTGGATGGGAGGAGTGCGGAGTTTTGATCTCCGTCCTCGGTGTTC
TAATGACCTCCGGAATGGGCCCCTTCGTCACTTTAATGGAAGCCTACTAC
GACTACAGCCCCCGAACCGACGATCTAATGACCTACCCAACCCTCTTTAT
GGGAATAGGGAACATCATCGCTATGCCACTCGCCATGGCAATCGGCAGAC
GCCCAGTATTCCTAGGCTCTGCATTGATCCTGACCGTGGGATCAATATGG
TGCGCTGCGAGCACAAGTCTTTCGTCGCATATAGCGGGAAGAGATGTGTT
ATCGTTGGCAGCAGGGCAATCAGAAGCCTTATGTCCTCTTATCATCCAGA
TCCCTTGAACTACCCTCAATGGCAAAAATGGATAATCACGTTCGTGCTGG
GATTGTATGTCTGCACATAGCAATATGGATGACAAGGACATCGACGCAAC
GCACCATGAACTCGCTATGGAGAAATCCTTAAAGCATCATGGCAAAGGCA
GTAACCCAACCGGCACAGTGAAATTAGTCGAGGATGGAGAAATAGTGTTG
ATTCCGACGCCGTCTCCGGATCCAAGAGGAAATCCACTTCGTCCACGAAC
GCAGCAGCCGACTCGCCTGGTTCAGTGCCATCCAATCCATCGGCACCGCC
GCCTTAACCATCGCCACATCCTACCTAGTAAGTAGCCTGGGCTGGAGATG
GTGGTACGGGGTATTCTCCATCGCCAGCGGACTAGTCTTCATCGGCGCAT
TCACCCTAGTCCCCGAATCCCGCTATGACCGACCAACCGACGCCTTCGAA
GGCGAAGTGCACATCCATCACGACGGCGAAGAGCAAGCCGTCATCCACGC
AACCACCAAGAACCGCGTACCCCTAGACTTCACCAACTACCAAGCCCGCA
CCTGGAAACACACTCTCAAAATCATGCACCCACCAGCGAACTGGGAAGAA
GCCCTAACATGCTACAAGCAAATGGGACAATGCATCCTGTTCCCTAACAT
CCTCTGGGTGGTCCTAATGAACAGCGTCTCCCTCGGCATCTACGTTATCG
GAGTGACAGAATACTCCTCCATCCTAGGAGCCCCTCCATACAATTACCCA
ACAACAAGCCTAGGCCTAGTCCAGGGCGGGCAAATCGTGGTAGCGATGAT
AATGGTTCCCGTACTCGGCTACGGCGGCGATCAGCTATACAAATGGGTCG
CGAGCCGTCGAGGGAACGGCACCGTTGAGTCCGAGATTCGGCTCATCCCG
ATGCTATTGCCGATTGTCGTACTGCTTATTTCATGCGTTATCTTTGGCCG
TGCTGGATCTCATCCTACGGAGTGGTCGCCGTGGGCGATTACCACTACCT
TTAGCGGGATGTATTTCGCTTATATAGGAATTATTCTCAACGGGTACACG
TATTCGTTGGATAGTTATGGAGAGCGAGCGGCGCCAATTCTGGTTCTGAT
TTGTGCCATTCGCGGGTTTATTTCTTTTGGGATCTCGTTTGGGATTACGA
AGTTCGTGACTGAGAAGGGGTTCCAGGGTGCTTTGGATATTTGTGCGATC
ATTGCGGGTGTTGTGGCGGCGCTTGGAATTCCGGTTTTTGTCTTTGGGGC
CTGGATTAGAAGGGTTACGATGAAATATGCGGTGGATGGGAGGAGTGCGG
AGTTTTGATCTCCGTCCTCGGTGTTCTAATGACCTCCGGAATGGGCCCCT
TCGTCACTTTAATGGAAGCCTACTACGACTACAGCCCCCGAACCGACGAT
CTAATGACCTACCCAACCCTCTTTATGGGAATAGGGAACATCATCGCTAT
GCCACTCGCCATGGCAATCGGCAGACGCCCAGTATTCCTAGGCTCTGCAT
TGATCCTGACCGTGGGATCAATATGGTGCGCTGCGAGCACAAGTCTTTCG
TCGCATATAGCGGGAAGAGATGTGTTATCGTTGGCAGCAGGGCAATCAGA
AGCCTTATGTCCTCTTATCATCCAGATCCCTTGAACTACCCTCAATGGCA
AAAATGGATAATCACGTTCGTGCTGGGATTGTATGTCTGCACATAGCAAT
ATGGATGACAAGGACATCGACGCAACGCACCATGAACTCGCTATGGAGAA
ATCCTTAAAGCATCATGGCAAAGGCAGTAACCCAACCGGCACAGTGAAAT
TAGTCGAGGATGGAGAAATAGTGTTGATTCCGACGCCGTCTCCGGATCCA
AGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008611-T1.utr3p1 | KJC3_008611-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008611-T1.utr5p1 | KJC3_008611-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2505039..2507225 - |
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