You are here

Home

KJC3_008612-T1, KJC3_008612-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008612-T1
Unique NameKJC3_008612-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2507531..2510115-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008612-T1 ID=KJC3_008612-T1|Name=KJC3_008612-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2585bp|location=Sequence derived from alignment at ch6:2507531..2510115- (Aspergillus niger KJC3)
TTATCCGACGATTGGGTCTGGAGCCATCCGCGAAGCGACCCCATCGTGTG
CACAAAACTGGTGTACGAAGCGGTGATATAGGCGGGTATGCTGATCTGGC
TGAGATCTGGTCGTTTATCCTTCCAGTATGCGCTGTTCGCAAGCGGATAT
CGTCGATACATCTCGTGAAAGTCTTCCACACCCCCGTGGCCCTGGATATT
ATGATCGATGATGAAATCAAACAAGCCCGCATCGAAGACTCCTCCTCGCA
CGAACTGCTCTCGATAGAGGTCACCGCATGCTTCCCAAGGAGCAATAGCC
TTGAGTGATGGCGGGTGCAACGCAGCGATAAACCACTGGACGATGGCCAA
GTGTGAGTTTCCTGCTAGACCAACGTTTCCATTGCACCAGGGCATCTTAG
CCACGGCCTCGATCACGTCGTAACCGTCCTCGGCTTCCTGGGTGCCCATG
ATACCTACTGTGCCGTCTGAATTGCCAGAACCACGGGCATCGACGTTGAT
GATGGCGAAGCCTCGAGGCACAAACTCAGCTGGATCAGGCCCTTCGAATT
TCTCCAGGCCGCTCAGCACGCCTTGAGGAATCCCTAGACCCCAGGGGAGG
AACTTCAACATGCTAATTCCATTGAACTTCTTCCCAAAGGGGCTCCATGC
TAAGATTGCGGGTACAGGTTTGGTGGTGTCTGTAGGACGATAGATGTCGC
AATATAATGTGCTTCCATCCCGGACCTGGATACCCACGTCGTGCGATGCA
TGGATGTCACAAGGCAAGGGACGCGAGCCATCTTTGTTCCAGCCTTTGGG
TAGAACTTCTTCACGAAACCCAAACGGCTGGTAATTGTTTCTGCCCACGG
TGGGCTTGTCAATTGGACGAGTCGCAACAGGTACCGGAGAAGGCATTTGA
AAAGTATTGATCGCAATATAGACGGGAATGCCAGAGATTGTCGAGCTCCT
TATGAACAATGCCACGCGCCCACCACTATGTGTTTTTCAAGAAAATACTA
AGCGTGAAGTTACAAATCAATGTGAGCTCTTGCTTTTCTCTCTGGTTGTC
GGGTTGTGGACATGGCGCATTGTCGGATCGTGCTATCGCGGCTATACCCC
CAGCACGGCCGAGCTCGGGCGAGTTTGCATGCTCGTCTTGAGCTCTGCTG
ACCGTTCGGCAATTCATGAGTTCGGGCACAATGACTAGGTCATGGGAAGT
GGCGATTACTATCTCGGATGAGGATGGGCTCGGCCGTGTCTAAGGGGATC
AGTTCGGATCAATTACCCTGGCTGGAGATCCAGCTGGAGGGATAAAAGCG
CGCAAAAGCTCCTCTTGCCGCCGAAGCCCTCGACGTCACCAAAGCTGTAT
ATTCTCAAAGTACCATTTGCTTAGCCATCCAGGAGATCCTTTATTGCAAT
TTTACACTTCAACCATATTCCTTCCAAGTCAAGCGTCCTAAATATGGCAC
CCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCCGGGGAAG
CTTCAGTCCATCCAGACACAGCAGCCTCAATATGGTGACTTCCGTGATGA
CTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGCAAAGAGC
GCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATCATTCGGC
CTTGGCTTTGATCGCAACGACAAGTCCACCTGGAAGAAGGAAAACCTCCC
ACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCGCACGAGA
AGTATGTCTGGGACGTCCGGTGGTAAGTCACGTCTCTCTTCCCTCCTCTC
TAGAGATCCATCTTGCTAAACCATGGCTACAGCGAGCCAGACGTCATTGC
TCCCTTCGCCAAACTCTGGGGCACCGACGAGCTCGTCGTCTCCTTCGACA
CAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGATTCTCAG
CCCTGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGGTCTGTGT
CCAGGGCATTGTCAATCTCTCTAACTCGGGCCCCGATGACGGTGGACTCA
TTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGAAGAGAAC
CCGGTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGGACTTCCA
TCCCTTCCATGACAAGGATTTAGACTGGTACCGCGAGCGTGGGTGCGAGT
TGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGACTCCAGA
CAGATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCACCATTGT
TTATGCGACATATACGCCGGCGGCGTGGATGAGTGAGGAGGATCGGCAGA
AGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTGGCCGCAT
ACGAACTTGTTCACACATGGGAAGGCGATGGTGAAAGTGGATGGAGAGGA
AGTGGTGGATCCGTTGGAGAGGGACGAACCTCTTACCAAGCCGGTGAGGA
GTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAGTGATCTGTA
GTATTAGATATCTTACAATTCTACTTCTTTTGTCA
back to top

Coding sequence (CDS) from alignment at ch6:2507531..2510115-

>KJC3_008612-T1 ID=KJC3_008612-T1|Name=KJC3_008612-T1|organism=Aspergillus niger KJC3|type=CDS|length=2076bp|location=Sequence derived from alignment at ch6:2507531..2510115- (Aspergillus niger KJC3)
CGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGC
TCGTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTA
GGCGCCTACGATTCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACG
CAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCC
CCGATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGAC
CAATTCTTCGAAGAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGC
CAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACC
GCGAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTG
ATCCTTTGGGACTCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGA
TCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGGATGA
GTGAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACA
ACTACACACTGGCCGCATACGAACTTGTTCACACATGGGAAGGCGATGGT
GAAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTC
TTACCAAGCCGGTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAG
CCGTACTAGATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATC
CCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATG
GTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGC
GTGCTGAGCAAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTG
GCTCGAATCATTCGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGA
AGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTC
TCTGCTGCGCACGAGAAGTATGTCTGGGACGTCCGGTGCGAGCCAGACGT
CATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGCTCGTCGTCTCCT
TCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGAT
TCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGGT
CTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCCCCGATGACGGTG
GACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGAA
GAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGGA
CTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACCGCGAGCGTGGGT
GCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGAC
TCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCAC
CATTGTTTATGCGACATATACGCCGGCGGCGTGGATGAGTGAGGAGGATC
GGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTGG
CCGCATACGAACTTGTTCACACATGGGAAGGCGATGGTGAAAGTGGATGG
AGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTCTTACCAAGCCGG
TGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAGATG
GCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCCGGG
GAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATGGTGACTTCCGTG
ATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGCAAA
GAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATCATT
CGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGAAGAAGGAAAACC
TCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCGCAC
GAGAAGTATGTCTGGGACGTCCGGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008612KJC3_008612Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008612-T1KJC3_008612-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008612-T1.cdsKJC3_008612-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008612-T1.utr3p1KJC3_008612-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008612-T1.exon2KJC3_008612-T1.exon2Aspergillus niger KJC3exon
KJC3_008612-T1.exon1KJC3_008612-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008612-T1.utr5p1KJC3_008612-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2507531..2510115 -
Powered by Drupal