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KJC3_008628-T1, KJC3_008628-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008628-T1
Unique NameKJC3_008628-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2543394..2545610-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008628-T1 ID=KJC3_008628-T1|Name=KJC3_008628-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2217bp|location=Sequence derived from alignment at ch6:2543394..2545610- (Aspergillus niger KJC3)
CTTAAACATTCATCATCACTGTCATCATCCCACTAATCCCTCCCTATTTC
AATTCAAATTACCTCCGTTTAATCCCATAACCCTCTCCTCCTCTTTTCCT
TCCATACAACTTCACACGTACATATATATACCACTACCACGCCTCACCAG
CACCAGCACCACAAACCTCCTCACACTCCTCCCCCAAAATACACTGCAAC
CCGATTTCTTGATTCCAAGAAAGAGGCAAGGAAAGAAATGTCCCTCCCCT
CCACCCCAACATACACCTTCTCTATCCCCTCCATACACGACCGCCTCCGT
CTAGACTGTCGCATTTATCTGCCCCCAGATCTGCACAAGCGATTGCTCCA
CGGCAGTTCCAGTTCCGATCGACCGTTACTGCGCGGGGCGATCATCGCGC
ATCCATACGCGCCGCTGGGAGGATGCTTTGATGATCCGGTTGTGGGGGTT
GTGGGTGGGGAGGTACTGAGGTTGGGGTGTGTTGTTGGGACGTTCAATTT
TCGGTATGTTATTCCTATCTTTATATCTACTCTGATACTATTTATTCGTG
TATCTGGCTGTTGTGGACTTGGTGTGAGGTGATGTGATGGTTGCTGATGA
GGTTATGGGACAGGGGCGCTGGTGGCTCAGAAGGACGGACGAGTTGGACG
GCTAGGCCTGAGTTGGCGGACTATGTCTCTTTTTATGGGTTTATGTTGCT
CTATTTGCATTTTCTGGGGGAGAGGGCAGTGCAGCAGGAGGGAGGAGGGG
ATAGGGGCAAGATAGGGGTGATTTTGGGTGGGTATTCGTACGGGTCGATG
ATTGCGTCGCATTTGCCGAAGCTTCATGATATCGTGGGCTTGGTGCGGAG
GTCATCGCCCGAGTCTCCTTTTCATGAGATTTACCAGGTTGCGGAGAAGT
TGTCGCTTTGTTTGAGCTTGGGCGAGGAAATGAAGCAGCCGACATATCGT
CCGGCTACAGTGGAGGAGATGAGATCCGCGGCGGACAGTATCAAACTCAC
TGCTGCTGTTTCTTATCTCCTTGTGTCGCCGCTTCTGCCACCGGTTAATC
AATTCTTGACGCTGTTTTCGAAGATGTCGCTTGATGCAAGTGCGCAGACA
TCATCGGCACCTGGGCAAGGGAAACAGGGACAGATACCCTGTCCCAAGCC
AGCCGATCAACTGTGTGCGCATGAGACATTGGCTATCTTCGGCGACGAGG
ACACATTCACGTCGGCGAGTAAATTAGAAAAATGGTCAGCCGAACTGGCC
CATGCACCGGGGAGTAGGTTCCAGGCGGTAGAGATCGAGGGAGCCGGCCA
TTTCTGGAGAGAACATGGTGTCGAGGCTCAGGCGAGACAGGCTATCCGGG
ACTGGGTGTGTCAGATGTCGACATCTTGATAAGATGGCTGGTATGTTTTG
ACATGTGTGGGTGGTCAGCCTGGTTTTATCGTGTCCCACTTCGAGTCTAG
ATCATGTGTGTCTGAGATACGAGAGGTTTGCGTGATAGAGTGCCAACCAG
ATGGTGGATTATCTCTCCCTCTTCACATGCAGGGCAGGGGTTGACGAGTG
GTGGTGAAGCATGTGAAGCGGGCGTGGGGCTCGCCTGACCGTTCCGACAG
AGGAAGGTCCCCTTCTTGGAAAGAGTCGATTCCGACCAGCGTCCATCTTG
AGGGCATTTCAGCTGCATTTTGCATGATCCTGTATGGCTACGGTGTCTTT
GCAGTGATGGGTGATGTCCCTTTGGTCTTTACTCGTTCATCGGCGAGACC
ACTAACACCCATGACGCAAGACGTTCCGCTCTGCTGGGATATGATGTTTT
GTTGCAAAACTCTCGAGAAGTGAGAAAGGCAGGAAAAAACATACAGCAGA
TGCTTATAGGGTCCGAGGAGATTGAACCATCCATGCCAGGCTTGTGAACC
AAGGTCGCCATCTTAGGTCCAATTTAGCGCAGTTCCCGATCCGGCTGGAT
CTGACACCGGGTAATAAGGCATGAAGTGGAAATCTCTTTTAAGTTTTACT
GATCTGCAGATTTTAGCATGCAAAGGGAATGCAGCAGACGATTGTGGGGG
TATGATATCACCGGATGTATGGGCCATCGGATGGAGGAATCGCCATCGCA
CACATACTTTGACAATTGTACAAATGCCGATCGGGGATCCGGTGTCGGGG
TCCACTAGATAAGAGTCTAGTTGTTATGGATGAGGACATGGGGTGTTCAT
CGATGATGATAAAGATG
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Coding sequence (CDS) from alignment at ch6:2543394..2545610-

>KJC3_008628-T1 ID=KJC3_008628-T1|Name=KJC3_008628-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch6:2543394..2545610- (Aspergillus niger KJC3)
GGGCGCTGGTGGCTCAGAAGGACGGACGAGTTGGACGGCTAGGCCTGAGT
TGGCGGACTATGTCTCTTTTTATGGGTTTATGTTGCTCTATTTGCATTTT
CTGGGGGAGAGGGCAGTGCAGCAGGAGGGAGGAGGGGATAGGGGCAAGAT
AGGGGTGATTTTGGGTGGGTATTCGTACGGGTCGATGATTGCGTCGCATT
TGCCGAAGCTTCATGATATCGTGGGCTTGGTGCGGAGGTCATCGCCCGAG
TCTCCTTTTCATGAGATTTACCAGGTTGCGGAGAAGTTGTCGCTTTGTTT
GAGCTTGGGCGAGGAAATGAAGCAGCCGACATATCGTCCGGCTACAGTGG
AGGAGATGAGATCCGCGGCGGACAGTATCAAACTCACTGCTGCTGTTTCT
TATCTCCTTGTGTCGCCGCTTCTGCCACCGGTTAATCAATTCTTGACGCT
GTTTTCGAAGATGTCGCTTGATGCAAGTGCGCAGACATCATCGGCACCTG
GGCAAGGGAAACAGGGACAGATACCCTGTCCCAAGCCAGCCGATCAACTG
TGTGCGCATGAGACATTGGCTATCTTCGGCGACGAGGACACATTCACGTC
GGCGAGTAAATTAGAAAAATGGTCAGCCGAACTGGCCCATGCACCGGGGA
GTAGGTTCCAGGCGGTAGAGATCGAGGGAGCCGGCCATTTCTGGAGAGAA
CATGGTGTCGAGGCTCAGGCGAGACAGGCTATCCGGGACTGGGTGTGTCA
GATGTCGACATCTTGAATGTCCCTCCCCTCCACCCCAACATACACCTTCT
CTATCCCCTCCATACACGACCGCCTCCGTCTAGACTGTCGCATTTATCTG
CCCCCAGATCTGCACAAGCGATTGCTCCACGGCAGTTCCAGTTCCGATCG
ACCGTTACTGCGCGGGGCGATCATCGCGCATCCATACGCGCCGCTGGGAG
GATGCTTTGATGATCCGGTTGTGGGGGTTGTGGGTGGGGAGGTACTGAGG
TTGGGGTGTGTTGTTGGGACGTTCAATTTTCGGGGCGCTGGTGGCTCAGA
AGGACGGACGAGTTGGACGGCTAGGCCTGAGTTGGCGGACTATGTCTCTT
TTTATGGGTTTATGTTGCTCTATTTGCATTTTCTGGGGGAGAGGGCAGTG
CAGCAGGAGGGAGGAGGGGATAGGGGCAAGATAGGGGTGATTTTGGGTGG
GTATTCGTACGGGTCGATGATTGCGTCGCATTTGCCGAAGCTTCATGATA
TCGTGGGCTTGGTGCGGAGGTCATCGCCCGAGTCTCCTTTTCATGAGATT
TACCAGGTTGCGGAGAAGTTGTCGCTTTGTTTGAGCTTGGGCGAGGAAAT
GAAGCAGCCGACATATCGTCCGGCTACAGTGGAGGAGATGAGATCCGCGG
CGGACAGTATCAAACTCACTGCTGCTGTTTCTTATCTCCTTGTGTCGCCG
CTTCTGCCACCGGTTAATCAATTCTTGACGCTGTTTTCGAAGATGTCGCT
TGATGCAAGTGCGCAGACATCATCGGCACCTGGGCAAGGGAAACAGGGAC
AGATACCCTGTCCCAAGCCAGCCGATCAACTGTGTGCGCATGAGACATTG
GCTATCTTCGGCGACGAGGACACATTCACGTCGGCGAGTAAATTAGAAAA
ATGGTCAGCCGAACTGGCCCATGCACCGGGGAGTAGGTTCCAGGCGGTAG
AGATCGAGGGAGCCGGCCATTTCTGGAGAGAACATGGTGTCGAGGCTCAG
GCGAGACAGGCTATCCGGGACTGGGTGTGTCAGATGTCGACATCTTGAAT
GTCCCTCCCCTCCACCCCAACATACACCTTCTCTATCCCCTCCATACACG
ACCGCCTCCGTCTAGACTGTCGCATTTATCTGCCCCCAGATCTGCACAAG
CGATTGCTCCACGGCAGTTCCAGTTCCGATCGACCGTTACTGCGCGGGGC
GATCATCGCGCATCCATACGCGCCGCTGGGAGGATGCTTTGATGATCCGG
TTGTGGGGGTTGTGGGTGGGGAGGTACTGAGGTTGGGGTGTGTTGTTGGG
ACGTTCAATTTTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008628KJC3_008628Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008628-T1KJC3_008628-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008628-T1.cdsKJC3_008628-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008628-T1.utr3p1KJC3_008628-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008628-T1.exon2KJC3_008628-T1.exon2Aspergillus niger KJC3exon
KJC3_008628-T1.exon1KJC3_008628-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008628-T1.utr5p1KJC3_008628-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2543394..2545610 -
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