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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2557205..2560173+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008632-T3 ID=KJC3_008632-T3|Name=KJC3_008632-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2969bp|location=Sequence derived from alignment at ch6:2557205..2560173+ (Aspergillus niger KJC3)
GGTGTCTGATCGACCAATCAGAGCCACTAGAAAGGGGGACCATCATCCGG
AGTGGCCGAGGCGGGAGTGGCCCACGTGAGTGTGCGGTTCCCAGTTCTTT
TCTGCTTAATGAGGTAATGATGTATGCTGGCTGGTGGATGGTTGGTAGAC
ATGTGAAAGTAGAATGGATAGTCATCTTCACAGTTCATTGTGTTGGAATG
AGTACACTCTGGACAACTCTGAGTACGGGATATCTTGTCTGTCGATCATC
GGACTCTTGTGCTGTGCTCTGTTACCTCTCTGATGAATTTACTCCGAGGG
AGTGACTATCATTGATTTAGTTACTCGGTGGGTTCAATACTACTTCAGGT
GTGTTATTGTGGGCCGGTCGTTCATGATAGTAACTCCGTTCAACTAGACT
ACATCTTTCGCCTTGTCCAAAGGCACGGGGATCCACTCTGCTCCCTTCTT
CTGCCGGGGCCCCGTAATATCCATCAGAAGGTTGCTTTCGTGTCCTATCT
TACTCGTTATTCATATCCTAGGTTAAATTGTCTGGAGTGATCATCGTCAT
TTAATTCTTTGGCTTGTGGCGTGGCGGGGAAAGCTCCGTGACTTTTGGTT
TGGCTCGGGTACTGCTGAGCTCTGATTTCTCTGCTTTTGGGTTCTTGACT
TTATATAACAGTCGGATACTTTGGGTTCCCCTTACTTTTCTTTTCCCTCT
CTCTCTCTTTCTTCACACTTCTTTACTACTACTTTTGGTTTTGCTGGCTT
GGTCCGTCCCCAGTCATCCCTACTATACCCTCCTCCCCCCATCCCGGATC
TGGCTCCATACCCACTCTCTCCTCTATTTAATACCAATCATGGCCAAGAC
TTTCACAAAAGGCGACGTAGCGTCGCACAACAAGGCCGATAACCTTTGGG
TGGTTATCGATGATGATGTTTACGATTTGACCAAGTTTCAAGATGAACAT
CCAGGTGCGTGCTTGACTCCTGCGAAAGAGGCCCTGTAATGCAATCATAT
GCTGACATCAATTTGCGACAAAATAGGCGGAAAGAAGAGTATGCCATAAT
CCTCCTATGTATCAGAATCTCGCGTCTAACCAGTCGTCCCTCCATCTAGT
CCTTCAGCGTGTTGCCGGGAAAGACGCCTCGAAGCAGTTTTGGAAATACC
ACAACGAGGGGATCCTGAAGAAATACAAGGGAAACCTGCAGATTGGTTCC
CTGGATTCCAAGAAAGCCGCAGCTCCCGAACCACCTGCTTCTTCTGCTCC
TGCATCACAGCCTTCTAAGCCTTTGGCGGCACCAGTTGACGTTGCTTCGG
CGAAGTCGTCCGAGACTCAGGATCCTTTTGGAGAATTGATTCCTTTTGCG
GACCCGGCGTGGTACCAAGGTGTAAGTTCATCGTGTGATTGTGAATGTTG
GCGGGCGGAGGTGTGGGGAGAGGACACTAGGCTAACTCGCTGGATTTGAT
GATTAGTACCACTCGCCCTACTTCAACCAGACTCACTCGGCGCTCCGCGA
GGAGATCCGCCAGTGGGTTGACTCTGAGATCGAGCCGTATGTGACCGAAT
GGGACGAGGCAAAGAAGGTCCCCGACCATATCTATAAGCAGATGGGCGAA
AGGGGATACCTGGCTGGTCTTCTGGGTATGAAGAAGTACCCTGTCGACTA
TACTCCGCACCGAGTTCAGTCCGTCGCGCCAGAGAACTGGGACCTGTTCC
ATGAGATGCTCCTTACTGATGAGTTGTCGCGGGTCGGCAGCGGTGGCCTG
GTATGGAACCTCATCGGCGGTTTTGGCATTGGTTGTCCGCCGCTGGTTAA
GTTTGGAAAGAAGCCCCTTGTGGACAGGATTCTGCCCGGTATCCTGGCTG
GCGACAAGCGCATTTGTCTGGCCATCACCGAGCCGGATGCGGGTAGTGAT
GTTGCTAACCTAACCTGCGAGGCTAAACTATCGCCCGACGGCAAGCATTA
CATCGTTAACGGCGAGAAGAAGTGGATCACCAACGGTGTCTGGTCGGATT
ACTTCACCACTGCGGTGCGCACTGGTGACGCCGGTATGAACGGTGTCAGT
GTACTCCTCATTGAGAGGGATATGGGCGGTGTCAGCACCCGACGCATGGA
CTGCCAGGGTGTCTGGAGCAGTGGTACCACCTATATCACCTTTGAGGATG
TCAAGGTTCCAGTTGAGAACCTCATCGGCAAGGAGAACCAAGGATTCAAG
GGTGAGCAGCCTAGGCACATCGACTCAATCTCGCAACCCGCTAATAATTA
CTGCAGTCATCATGACCAACTTCAATCACGAGCGTATTGGCATTGTGATC
CAGTGTGTCCGGTTCGCCCGGGTGTGTTATGAAGAGTCGATGAAGTATGC
CCACAAGCGCCGCACCTTCGGCAAGAGGCTCATCGACCATCCCGTGATTC
GGATGAAGCTGGCGCACATGGCCCGTCAGATCGAGGCAACATACAACTGG
CTGGAGAACATCATCTACCAGTGCCAGTCGATGGACGAGACTGAAGCCAT
GCTCAAGTTGGGTGGCGCCATTGCCGGTCTGAAGGCGCAATCCACCACCA
CTTTTGAGTTCTGTGCCCGTGAGGCCAGTCAGATCTTTGGTGGTCTCAGT
TATAGCCGTGGTGGTCAAGGTGGTAAGATTGAGAGGTTGTACCGTGATGT
TCGGGCCTACGCGATCCCTGGTGGAAGCGAGGAAATCATGTTGGATCTCA
GCATGCGTCAGAGCTTGCGCGTGCATCAAATGTTTGGACTGAAGCTCTGA
GAGCAGCTATATCTGCTATTTCCTTTCATTTTTGAGGGTACATAGATCAC
TATTGTAGTCGCTTTTTATAGCCACTTTTGCGGGTCGGATGAGAAATTGT
ATCTCCCATATGGTGTATTTATATGAACAAATATGAACTAGCTTGGTAAA
ATAAACTCCACCCTTCAGTAAATTGATTGTGTTAGTATCGATATGGGTAT
TTGCTCGGATGAAAGAAAC back to topCoding sequence (CDS) from alignment at ch6:2557205..2560173+ >KJC3_008632-T3 ID=KJC3_008632-T3|Name=KJC3_008632-T3|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch6:2557205..2560173+ (Aspergillus niger KJC3)
ATGTATCAGAATCTCGCGTCTAACCAGTCGTCCCTCCATCTAGTCCTTCA
GCGTGTTGCCGGGAAAGACGCCTCGAAGCAGTTTTGGAAATACCACAACG
AGGGGATCCTGAAGAAATACAAGGGAAACCTGCAGATTGGTTCCCTGGAT
TCCAAGAAAGCCGCAGCTCCCGAACCACCTGCTTCTTCTGCTCCTGCATC
ACAGCCTTCTAAGCCTTTGGCGGCACCAGTTGACGTTGCTTCGGCGAAGT
CGTCCGAGACTCAGGATCCTTTTGGAGAATTGATTCCTTTTGCGGACCCG
GCGTGGTACCAAGGTTACCACTCGCCCTACTTCAACCAGACTCACTCGGC
GCTCCGCGAGGAGATCCGCCAGTGGGTTGACTCTGAGATCGAGCCGTATG
TGACCGAATGGGACGAGGCAAAGAAGGTCCCCGACCATATCTATAAGCAG
ATGGGCGAAAGGGGATACCTGGCTGGTCTTCTGGGTATGAAGAAGTACCC
TGTCGACTATACTCCGCACCGAGTTCAGTCCGTCGCGCCAGAGAACTGGG
ACCTGTTCCATGAGATGCTCCTTACTGATGAGTTGTCGCGGGTCGGCAGC
GGTGGCCTGGTATGGAACCTCATCGGCGGTTTTGGCATTGGTTGTCCGCC
GCTGGTTAAGTTTGGAAAGAAGCCCCTTGTGGACAGGATTCTGCCCGGTA
TCCTGGCTGGCGACAAGCGCATTTGTCTGGCCATCACCGAGCCGGATGCG
GGTAGTGATGTTGCTAACCTAACCTGCGAGGCTAAACTATCGCCCGACGG
CAAGCATTACATCGTTAACGGCGAGAAGAAGTGGATCACCAACGGTGTCT
GGTCGGATTACTTCACCACTGCGGTGCGCACTGGTGACGCCGGTATGAAC
GGTGTCAGTGTACTCCTCATTGAGAGGGATATGGGCGGTGTCAGCACCCG
ACGCATGGACTGCCAGGGTGTCTGGAGCAGTGGTACCACCTATATCACCT
TTGAGGATGTCAAGGTTCCAGTTGAGAACCTCATCGGCAAGGAGAACCAA
GGATTCAAGGTCATCATGACCAACTTCAATCACGAGCGTATTGGCATTGT
GATCCAGTGTGTCCGGTTCGCCCGGGTGTGTTATGAAGAGTCGATGAAGT
ATGCCCACAAGCGCCGCACCTTCGGCAAGAGGCTCATCGACCATCCCGTG
ATTCGGATGAAGCTGGCGCACATGGCCCGTCAGATCGAGGCAACATACAA
CTGGCTGGAGAACATCATCTACCAGTGCCAGTCGATGGACGAGACTGAAG
CCATGCTCAAGTTGGGTGGCGCCATTGCCGGTCTGAAGGCGCAATCCACC
ACCACTTTTGAGTTCTGTGCCCGTGAGGCCAGTCAGATCTTTGGTGGTCT
CAGTTATAGCCGTGGTGGTCAAGGTGGTAAGATTGAGAGGTTGTACCGTG
ATGTTCGGGCCTACGCGATCCCTGGTGGAAGCGAGGAAATCATGTTGGAT
CTCAGCATGCGTCAGAGCTTGCGCGTGCATCAAATGTTTGGACTGAAGCT
CTGAATGTATCAGAATCTCGCGTCTAACCAGTCGTCCCTCCATCTAGTCC
TTCAGCGTGTTGCCGGGAAAGACGCCTCGAAGCAGTTTTGGAAATACCAC
AACGAGGGGATCCTGAAGAAATACAAGGGAAACCTGCAGATTGGTTCCCT
GGATTCCAAGAAAGCCGCAGCTCCCGAACCACCTGCTTCTTCTGCTCCTG
CATCACAGCCTTCTAAGCCTTTGGCGGCACCAGTTGACGTTGCTTCGGCG
AAGTCGTCCGAGACTCAGGATCCTTTTGGAGAATTGATTCCTTTTGCGGA
CCCGGCGTGGTACCAAGGTTACCACTCGCCCTACTTCAACCAGACTCACT
CGGCGCTCCGCGAGGAGATCCGCCAGTGGGTTGACTCTGAGATCGAGCCG
TATGTGACCGAATGGGACGAGGCAAAGAAGGTCCCCGACCATATCTATAA
GCAGATGGGCGAAAGGGGATACCTGGCTGGTCTTCTGGGTATGAAGAAGT
ACCCTGTCGACTATACTCCGCACCGAGTTCAGTCCGTCGCGCCAGAGAAC
TGGGACCTGTTCCATGAGATGCTCCTTACTGATGAGTTGTCGCGGGTCGG
CAGCGGTGGCCTGGTATGGAACCTCATCGGCGGTTTTGGCATTGGTTGTC
CGCCGCTGGTTAAGTTTGGAAAGAAGCCCCTTGTGGACAGGATTCTGCCC
GGTATCCTGGCTGGCGACAAGCGCATTTGTCTGGCCATCACCGAGCCGGA
TGCGGGTAGTGATGTTGCTAACCTAACCTGCGAGGCTAAACTATCGCCCG
ACGGCAAGCATTACATCGTTAACGGCGAGAAGAAGTGGATCACCAACGGT
GTCTGGTCGGATTACTTCACCACTGCGGTGCGCACTGGTGACGCCGGTAT
GAACGGTGTCAGTGTACTCCTCATTGAGAGGGATATGGGCGGTGTCAGCA
CCCGACGCATGGACTGCCAGGGTGTCTGGAGCAGTGGTACCACCTATATC
ACCTTTGAGGATGTCAAGGTTCCAGTTGAGAACCTCATCGGCAAGGAGAA
CCAAGGATTCAAGGTCATCATGACCAACTTCAATCACGAGCGTATTGGCA
TTGTGATCCAGTGTGTCCGGTTCGCCCGGGTGTGTTATGAAGAGTCGATG
AAGTATGCCCACAAGCGCCGCACCTTCGGCAAGAGGCTCATCGACCATCC
CGTGATTCGGATGAAGCTGGCGCACATGGCCCGTCAGATCGAGGCAACAT
ACAACTGGCTGGAGAACATCATCTACCAGTGCCAGTCGATGGACGAGACT
GAAGCCATGCTCAAGTTGGGTGGCGCCATTGCCGGTCTGAAGGCGCAATC
CACCACCACTTTTGAGTTCTGTGCCCGTGAGGCCAGTCAGATCTTTGGTG
GTCTCAGTTATAGCCGTGGTGGTCAAGGTGGTAAGATTGAGAGGTTGTAC
CGTGATGTTCGGGCCTACGCGATCCCTGGTGGAAGCGAGGAAATCATGTT
GGATCTCAGCATGCGTCAGAGCTTGCGCGTGCATCAAATGTTTGGACTGA
AGCTCTGAATGTATCAGAATCTCGCGTCTAACCAGTCGTCCCTCCATCTA
GTCCTTCAGCGTGTTGCCGGGAAAGACGCCTCGAAGCAGTTTTGGAAATA
CCACAACGAGGGGATCCTGAAGAAATACAAGGGAAACCTGCAGATTGGTT
CCCTGGATTCCAAGAAAGCCGCAGCTCCCGAACCACCTGCTTCTTCTGCT
CCTGCATCACAGCCTTCTAAGCCTTTGGCGGCACCAGTTGACGTTGCTTC
GGCGAAGTCGTCCGAGACTCAGGATCCTTTTGGAGAATTGATTCCTTTTG
CGGACCCGGCGTGGTACCAAGGTTACCACTCGCCCTACTTCAACCAGACT
CACTCGGCGCTCCGCGAGGAGATCCGCCAGTGGGTTGACTCTGAGATCGA
GCCGTATGTGACCGAATGGGACGAGGCAAAGAAGGTCCCCGACCATATCT
ATAAGCAGATGGGCGAAAGGGGATACCTGGCTGGTCTTCTGGGTATGAAG
AAGTACCCTGTCGACTATACTCCGCACCGAGTTCAGTCCGTCGCGCCAGA
GAACTGGGACCTGTTCCATGAGATGCTCCTTACTGATGAGTTGTCGCGGG
TCGGCAGCGGTGGCCTGGTATGGAACCTCATCGGCGGTTTTGGCATTGGT
TGTCCGCCGCTGGTTAAGTTTGGAAAGAAGCCCCTTGTGGACAGGATTCT
GCCCGGTATCCTGGCTGGCGACAAGCGCATTTGTCTGGCCATCACCGAGC
CGGATGCGGGTAGTGATGTTGCTAACCTAACCTGCGAGGCTAAACTATCG
CCCGACGGCAAGCATTACATCGTTAACGGCGAGAAGAAGTGGATCACCAA
CGGTGTCTGGTCGGATTACTTCACCACTGCGGTGCGCACTGGTGACGCCG
GTATGAACGGTGTCAGTGTACTCCTCATTGAGAGGGATATGGGCGGTGTC
AGCACCCGACGCATGGACTGCCAGGGTGTCTGGAGCAGTGGTACCACCTA
TATCACCTTTGAGGATGTCAAGGTTCCAGTTGAGAACCTCATCGGCAAGG
AGAACCAAGGATTCAAGGTCATCATGACCAACTTCAATCACGAGCGTATT
GGCATTGTGATCCAGTGTGTCCGGTTCGCCCGGGTGTGTTATGAAGAGTC
GATGAAGTATGCCCACAAGCGCCGCACCTTCGGCAAGAGGCTCATCGACC
ATCCCGTGATTCGGATGAAGCTGGCGCACATGGCCCGTCAGATCGAGGCA
ACATACAACTGGCTGGAGAACATCATCTACCAGTGCCAGTCGATGGACGA
GACTGAAGCCATGCTCAAGTTGGGTGGCGCCATTGCCGGTCTGAAGGCGC
AATCCACCACCACTTTTGAGTTCTGTGCCCGTGAGGCCAGTCAGATCTTT
GGTGGTCTCAGTTATAGCCGTGGTGGTCAAGGTGGTAAGATTGAGAGGTT
GTACCGTGATGTTCGGGCCTACGCGATCCCTGGTGGAAGCGAGGAAATCA
TGTTGGATCTCAGCATGCGTCAGAGCTTGCGCGTGCATCAAATGTTTGGA
CTGAAGCTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008632-T3.utr3p1 | KJC3_008632-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036250 |
| DBxref | InterPro:IPR009100 |
| DBxref | InterPro:IPR036400 |
| DBxref | InterPro:IPR013786 |
| DBxref | InterPro:IPR009075 |
| DBxref | InterPro:IPR006091 |
| DBxref | InterPro:IPR037069 |
| DBxref | PFAM:PF02770 |
| DBxref | PFAM:PF08028 |
| DBxref | PFAM:PF00441 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2557205..2560173 + |
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