You are here

Home

KJC3_008636-T1, KJC3_008636-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008636-T1
Unique NameKJC3_008636-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2571164..2573583+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008636-T1 ID=KJC3_008636-T1|Name=KJC3_008636-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2420bp|location=Sequence derived from alignment at ch6:2571164..2573583+ (Aspergillus niger KJC3)
GAAAGGGATCTTGTGTTGCGTTGCAGGACGGCAGATATTTGGCACCGGAT
CGCTAGGCGGGGATTTACACTCTTCTATCACACCAAAGCGTACATCGTGC
GTTGTATAACCCTTTGACTTTATCGTCATCGCTCTGAAACTATACCCTTG
CTGTGTTCTTCATTCTCTACTAGGCTCCACCCGTGAGCTCCCCCCTCCTC
CCCGCAATATGGCTTCAGATCAACTTTCGGCCCTGCTTCTGCTGCCGCCA
CCCCCTTCGGCATCATTCAACGAGTTCAAGGCTGCATATGAGCCCGTCCT
GTTGGGTGTTTGCACCAAGCTTGTCCGCGAACTCAATGGAGCCAATCACA
CGGCTATACTAGATATTGCGCTCTCTCTTCCTGGCCTCCTATCCCCCTCA
TGTCGGCCACGCACTAGGGCATTTTCAAGCCTCCAGTCTCTTCTGGAAAG
CATCTATAGGCTTATTGGGATTGTATGTGTTGAGCAAGGCATTGAGCTTG
ATGGTCCGGGTGGTATTGACCCCCGTGTGATCTTGCTCGATTACGACTCG
GTCCAGACTGCCGTCACCAGGGACAATCCGTGTGACGGCCCTATCATTGA
CTTGCAGACATTGGCGCGGTCTGGACGACTGTGGGATTACATATACTACC
CGGATAACCAAGTAGGTCAGGGTCTAGCAACGGCCTTCAGTAGCTTCTAT
TCTGAGTCCAGGGACCCCAACGGCGGATCCATGAGCGCAATCCCAGATGC
ACCCAACTGGAAGGCTGCAGAATCCCTTTTGGTGATGGACGATAACCACA
CATCAACTACGCATTACTCTGTGGCTGTAGGAGGCACTTTCGATCACTTT
CACATTGGCCACAAGCTTCTGCTCACAGCTACGGCATTGGTATTGCAGCC
TGCTGAAGACGTGGAGGCAGGTAATGTCCGGAAGATCACCGTCGGGGTGA
CAGGGGAAGGTTTGCTGGCGAAGAAGAAGTATGCTGAATATTTGGAAAGC
TGGGACGAGCGATGCATGAGCACTGGGTCATTCCTCTCGGCCATCATGGA
TTTCCGTCTCCCAGAAACCAGTGCGCCGCGTATTGAACGGGAGTCTGGGT
CTGGGCCCGATGACAAGTACATTCAGATGCAAATGCGGCCAGATCTAGTC
TTCAAGCTGGTACAGATCACAGATCCTTTTGGCCCTACCGTCACCGACAA
GGGAATTAGTGCTCTTGTTGTTTCCAAGGAAACTCGTGCAGGTGGGAGCG
CGGTCAATGAGGAGCGTGCAAAGAAAGGCTGGGAGAGCCTGGAGGTGTTT
GAAGTCGACGTACTACATACAGGCGAAGTTCCCACCGATGATGCCGAGAG
CTTCGCGTCGAAGATAAGCAGCACGGATATCAGACGGCGTCGGATGGAGA
TGGCAACGGAATAAATTAGCGCAGTGAACTGGCAAAGCGTGCGGGCAGCT
ATGCGAACCAGTCGTCAAGCTCGAGAATCTAGACATTGACAGCTGTCCTG
AAACGGCACAGGGCAGGCGTGCAGATATGGGGATGATTGGGCACGATGTG
ATCCTGTACATACAATGCCGGCATCACCAGCAGCCAGGGACAACAAAGCG
AGTCATGCGTTAATCATATTGATTTTTGTGTGTCGCGATGGTGCTTCTTG
ATGAGGTGACGCGACGAGGAATGAGCTTCAATATTTTAAATGGGGTTTGT
AAGATAAACCGTCTCCGCACTAATATGTGGTGGCCTACTCTCATTTTCTT
CTCTTCTTTCTCCAACCGCCATTATTATATTTACTCCCTTCCTAATTTCC
GGGAGGTTTCTGAATGACCTTATTATTTGAATCTCTCTCTTTGTTTGATG
TCCTAAACCTAACCGCAATTTACCCCTGAGAAGGGTTCGGGATGAGTTGT
TTTCTTTGTGCAAAGAGACTGGAGCAAGAGAGCAGAGAGAACAGACCACC
ACCCATCTTATCTCCCCGGCGTTTGGGATTGCGCCCTGGACTCGGGGGCT
ACTGGCCCAGAGTGTTTTAGGGGCTGATGATCCTTTCCCTCACAGCATCC
CCACGCGAGGCTTTTCAATCCGGACCAACGCAATACTATTGTTGGCGATT
CCGATCCAGTTCTGCAATCTCGATACCGTGCTGCTAACTAGTCCTGCTAC
TAGCAACCCCCCGGTTCGATGGAGCAGCTCCATTGCGCTAGGCGACGGAG
ATGGGGCAGAAGGAGGGAATAAATGCCGTGCGCAACTCGCCAGTCGCAAG
CAGGGACGATCTAGGCTTGGGAACGACAGGCCGCCATTGATTCGCGTTCC
AGGCGGGGTTCCCTTGCTTGCAGCAACTCAGTGGGCGTCTGTCTGCACGC
AACAGACTCTCATGTCGCATCATTTCCCTCCCCTCCCCTCCCCCCCTCCC
TCCTGCTGCTTCCCTTATCC
back to top

Coding sequence (CDS) from alignment at ch6:2571164..2573583+

>KJC3_008636-T1 ID=KJC3_008636-T1|Name=KJC3_008636-T1|organism=Aspergillus niger KJC3|type=CDS|length=1206bp|location=Sequence derived from alignment at ch6:2571164..2573583+ (Aspergillus niger KJC3)
ATGGCTTCAGATCAACTTTCGGCCCTGCTTCTGCTGCCGCCACCCCCTTC
GGCATCATTCAACGAGTTCAAGGCTGCATATGAGCCCGTCCTGTTGGGTG
TTTGCACCAAGCTTGTCCGCGAACTCAATGGAGCCAATCACACGGCTATA
CTAGATATTGCGCTCTCTCTTCCTGGCCTCCTATCCCCCTCATGTCGGCC
ACGCACTAGGGCATTTTCAAGCCTCCAGTCTCTTCTGGAAAGCATCTATA
GGCTTATTGGGATTGTATGTGTTGAGCAAGGCATTGAGCTTGATGGTCCG
GGTGGTATTGACCCCCGTGTGATCTTGCTCGATTACGACTCGGTCCAGAC
TGCCGTCACCAGGGACAATCCGTGTGACGGCCCTATCATTGACTTGCAGA
CATTGGCGCGGTCTGGACGACTGTGGGATTACATATACTACCCGGATAAC
CAAGTAGGTCAGGGTCTAGCAACGGCCTTCAGTAGCTTCTATTCTGAGTC
CAGGGACCCCAACGGCGGATCCATGAGCGCAATCCCAGATGCACCCAACT
GGAAGGCTGCAGAATCCCTTTTGGTGATGGACGATAACCACACATCAACT
ACGCATTACTCTGTGGCTGTAGGAGGCACTTTCGATCACTTTCACATTGG
CCACAAGCTTCTGCTCACAGCTACGGCATTGGTATTGCAGCCTGCTGAAG
ACGTGGAGGCAGGTAATGTCCGGAAGATCACCGTCGGGGTGACAGGGGAA
GGTTTGCTGGCGAAGAAGAAGTATGCTGAATATTTGGAAAGCTGGGACGA
GCGATGCATGAGCACTGGGTCATTCCTCTCGGCCATCATGGATTTCCGTC
TCCCAGAAACCAGTGCGCCGCGTATTGAACGGGAGTCTGGGTCTGGGCCC
GATGACAAGTACATTCAGATGCAAATGCGGCCAGATCTAGTCTTCAAGCT
GGTACAGATCACAGATCCTTTTGGCCCTACCGTCACCGACAAGGGAATTA
GTGCTCTTGTTGTTTCCAAGGAAACTCGTGCAGGTGGGAGCGCGGTCAAT
GAGGAGCGTGCAAAGAAAGGCTGGGAGAGCCTGGAGGTGTTTGAAGTCGA
CGTACTACATACAGGCGAAGTTCCCACCGATGATGCCGAGAGCTTCGCGT
CGAAGATAAGCAGCACGGATATCAGACGGCGTCGGATGGAGATGGCAACG
GAATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008636KJC3_008636Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008636-T1KJC3_008636-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008636-T1.utr5p1KJC3_008636-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008636-T1.exon1KJC3_008636-T1.exon1Aspergillus niger KJC3exon
KJC3_008636-T1.exon2KJC3_008636-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008636-T1.cdsKJC3_008636-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008636-T1.utr3p1KJC3_008636-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_008636-T1.utr3p2KJC3_008636-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2571164..2573583 +
Powered by Drupal