You are here

Home

KJC3_008638-T1, KJC3_008638-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008638-T1
Unique NameKJC3_008638-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2576505..2579153-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008638-T1 ID=KJC3_008638-T1|Name=KJC3_008638-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2649bp|location=Sequence derived from alignment at ch6:2576505..2579153- (Aspergillus niger KJC3)
ATGATGTCCAGAAGCCAGTCGAGCTTGGGCTTCATGGACGCGGGGAGGGA
TGATCCCTCTGCGCCAGGCGCTCAACCTGGACATCAAGCGCCACCGTCCA
ACTCGGGTCCCATCAATCTGTCAGGTCTGGTGTGCAATGTGCGCCGAACA
ACTGGCAGGGAACCGCATCCGTTGGTCGGGGCAACCACGACTATCCTGGG
CGATAAGCTCTACGTGTTCGGTGGTCGTGTTCTGTCTAAAAGTCGCCCGC
AATTGACGTCGGACATATACGAGCTGGACTTGATCCGGCGTCACTGGACG
AAGATCGAGACCACCGGCGATATCCCCCGCCCGCGGTACTTTCACAGTGT
CTGCGCTCTGGGTGATCACAAGTTGGTGTGCTATGGCGGCATGTCGCCCG
CACTGAACGTATCAAAGGAGCCGGCCAGTAATGGCTCAGGTGGACAGGAA
GCACAGCCAGAAGTGGTGGTCATGTCTGATATCCATATCTTCGATGTACC
ATCTCGGACGTGGACCCGTGTGCCTGCCACAGACTCGCCACAGGGACGCT
ATGCGCACTGCGCGACCATTTTGCCTTCGAGCGCCCATTTCACCTCCGCC
ACTGCTCCACTCTCTGCAATCCATCACAATCCCGCCTCGTCAAATCCGCA
CCAGGGATCGATTGGGGTGGATATCGACGGGTTTGGAGGAGCGGAGATGG
TGGTCGTAGGAGGGCAAGATAGCTCAAACCACTACATCGAACAGATTAGT
GTGTTTAACCTACGGAGCCTCAAGTGGACCAGTACCACTCACCTGGGGCG
AAGCTGCGGTGCCTACCGAAGTGTGGTCGCTCCCTTGGTAGGCATGAATG
TTTCCGACATTGGGTCTGCCGCAGACGATGGGGAGGCACAGGAGCCGTTG
GAAGAGTCGCAGGTCGAGGGGTGTCCGATGTTGGTCTATTCTAATTACAA
CTTCCTGGATGTGAAGCTGGAGCTCCAGGTGCGCCTCCCAGATGGCCGCC
TGATCGAGAAGCCCATGCAGAGCCAGGCGTCGCCTCCTGGCTTGAGGTTC
CCCAACGGAGGAGTCATCAACGGTCATTTTGTCGTGAGCGGAACCTACCT
GACCTCGTCGAAGCAAGAATATGCGCTTTGGGCCCTCGACCTGAGAACCC
TTACCTGGGGTCGGATCGATGCCGGCGGGTCTGTGTTCGGCCATGGCAGC
TGGAACCGTGGAATTTTGTGGCCAAGAAGAAACACTTTTGTCATTCTGGG
CCACCGGAAGCGCAGCTTGGTTGAGGACTACAACCATCGTCGCATCAACT
TCTCCCACGTATGTATGGTCGAGTTGGAAGCGTTTGGGCTCTACAACAAC
GCGTGCCGGACCACGCCCACATCGGGATACATCTCGTACAGTTCTCCGGC
AGTCCCTGCATCCATGCAGCACAAATTGACCAAGTTGACCTCCGGCGGAA
GGCCGTTCACCTCCGCGTCTGACGAGCTAGGCAGACTTGCCCAGTCTCTG
CCTGAAATGGCCGATATGGAGCTGCAGGCAGTCGGAGGTGAGCGCATCCC
GGTGAACTCACGCATCCTGACTCGCAGATGGGGTCCTTATTTCATCCAGC
TTCTACGCGAGTCTTGTGATAGCGGGATCGCCGAGACTGCCACACTACGT
CCAGCAGTTGCCATGTATCCCAGTCGCAACTCGAGCATCACCATCACCCC
GTCACTGGGGCAAAACAGCACGTATTCCAATTCCAGCACTCTTGTCAGCA
ACCGCTCAGTCACCTCAAAGTCCTTGTTAGCGAACCTTGAGATACCCTCT
GCGCATAGCCTTTCCCCTACCTCTCGTCCTCGTGTGCTTTACCTCCCCCA
TACCGTCATCACTCTTCAAGTTCTTGTCTACTATTTCTACACCTCGTCTC
TTCCCCCCGCCGGCTCACCCCTCTGCACCCCACAAATCCTTTGCTCCCTT
CTCCAACTCGCCCGTCCCTACCAAGTCGACGGCCTCCTCGAAGCCACCGT
CGAACGCCTCCACCAAGTTCTCGACGGAAGAAACGCCGCTGCCGTCTTCA
ACGCTGCCGCAATGGCCGCCGGCGGTGGCCGAGGCACCGGCTTCACAAGT
GGCCCCGGCGGCACCCTGGAGGCGCTGAACGGCGCCCACGCCGGCCACGA
ATCCTCCTCCGGTACCGGAACCACCACCTCCCAGAGCCACCTCACCTCCG
ATTCCTCCGACACCGAACACGGCACCTCCGCCCTCTCTGTTGCCAGCAGC
GCCAGCGGCGTCATGGGCTCGCGCGGCATCCCCCTCCGCATCAACACCAA
CATCTTCAGCCGCCGGCACCGCAGCAACGCCGGCGTAGACCGGGACCGCG
AGGACTCCATGAGCAATGCCAGCATTTCCACCTCAGCCTCCACCAACACC
AGCTTCGACCACTCCGACTCCGAAATGGGCGGCGACCCGACCCGTCCGTC
CCACCACCGCCGCAACACCGACGCAGAACTCCGTCCCGAACGCGAGATCT
GGACCGGAGACCTCAGCAGCGTCATCGGTCTTCAGAAGCGCGGTCTCCGC
GGTCTCATGGAAGGTCGGAGGCTCCGGGAACGCAACAATAAACCTGCTGG
CGCAGCCGATCATGTTGCTACTGCTGTTGCTCCACCGCCTGGCGCGTAG
back to top

Coding sequence (CDS) from alignment at ch6:2576505..2579153-

>KJC3_008638-T1 ID=KJC3_008638-T1|Name=KJC3_008638-T1|organism=Aspergillus niger KJC3|type=CDS|length=2649bp|location=Sequence derived from alignment at ch6:2576505..2579153- (Aspergillus niger KJC3)
ATGATGTCCAGAAGCCAGTCGAGCTTGGGCTTCATGGACGCGGGGAGGGA
TGATCCCTCTGCGCCAGGCGCTCAACCTGGACATCAAGCGCCACCGTCCA
ACTCGGGTCCCATCAATCTGTCAGGTCTGGTGTGCAATGTGCGCCGAACA
ACTGGCAGGGAACCGCATCCGTTGGTCGGGGCAACCACGACTATCCTGGG
CGATAAGCTCTACGTGTTCGGTGGTCGTGTTCTGTCTAAAAGTCGCCCGC
AATTGACGTCGGACATATACGAGCTGGACTTGATCCGGCGTCACTGGACG
AAGATCGAGACCACCGGCGATATCCCCCGCCCGCGGTACTTTCACAGTGT
CTGCGCTCTGGGTGATCACAAGTTGGTGTGCTATGGCGGCATGTCGCCCG
CACTGAACGTATCAAAGGAGCCGGCCAGTAATGGCTCAGGTGGACAGGAA
GCACAGCCAGAAGTGGTGGTCATGTCTGATATCCATATCTTCGATGTACC
ATCTCGGACGTGGACCCGTGTGCCTGCCACAGACTCGCCACAGGGACGCT
ATGCGCACTGCGCGACCATTTTGCCTTCGAGCGCCCATTTCACCTCCGCC
ACTGCTCCACTCTCTGCAATCCATCACAATCCCGCCTCGTCAAATCCGCA
CCAGGGATCGATTGGGGTGGATATCGACGGGTTTGGAGGAGCGGAGATGG
TGGTCGTAGGAGGGCAAGATAGCTCAAACCACTACATCGAACAGATTAGT
GTGTTTAACCTACGGAGCCTCAAGTGGACCAGTACCACTCACCTGGGGCG
AAGCTGCGGTGCCTACCGAAGTGTGGTCGCTCCCTTGGTAGGCATGAATG
TTTCCGACATTGGGTCTGCCGCAGACGATGGGGAGGCACAGGAGCCGTTG
GAAGAGTCGCAGGTCGAGGGGTGTCCGATGTTGGTCTATTCTAATTACAA
CTTCCTGGATGTGAAGCTGGAGCTCCAGGTGCGCCTCCCAGATGGCCGCC
TGATCGAGAAGCCCATGCAGAGCCAGGCGTCGCCTCCTGGCTTGAGGTTC
CCCAACGGAGGAGTCATCAACGGTCATTTTGTCGTGAGCGGAACCTACCT
GACCTCGTCGAAGCAAGAATATGCGCTTTGGGCCCTCGACCTGAGAACCC
TTACCTGGGGTCGGATCGATGCCGGCGGGTCTGTGTTCGGCCATGGCAGC
TGGAACCGTGGAATTTTGTGGCCAAGAAGAAACACTTTTGTCATTCTGGG
CCACCGGAAGCGCAGCTTGGTTGAGGACTACAACCATCGTCGCATCAACT
TCTCCCACGTATGTATGGTCGAGTTGGAAGCGTTTGGGCTCTACAACAAC
GCGTGCCGGACCACGCCCACATCGGGATACATCTCGTACAGTTCTCCGGC
AGTCCCTGCATCCATGCAGCACAAATTGACCAAGTTGACCTCCGGCGGAA
GGCCGTTCACCTCCGCGTCTGACGAGCTAGGCAGACTTGCCCAGTCTCTG
CCTGAAATGGCCGATATGGAGCTGCAGGCAGTCGGAGGTGAGCGCATCCC
GGTGAACTCACGCATCCTGACTCGCAGATGGGGTCCTTATTTCATCCAGC
TTCTACGCGAGTCTTGTGATAGCGGGATCGCCGAGACTGCCACACTACGT
CCAGCAGTTGCCATGTATCCCAGTCGCAACTCGAGCATCACCATCACCCC
GTCACTGGGGCAAAACAGCACGTATTCCAATTCCAGCACTCTTGTCAGCA
ACCGCTCAGTCACCTCAAAGTCCTTGTTAGCGAACCTTGAGATACCCTCT
GCGCATAGCCTTTCCCCTACCTCTCGTCCTCGTGTGCTTTACCTCCCCCA
TACCGTCATCACTCTTCAAGTTCTTGTCTACTATTTCTACACCTCGTCTC
TTCCCCCCGCCGGCTCACCCCTCTGCACCCCACAAATCCTTTGCTCCCTT
CTCCAACTCGCCCGTCCCTACCAAGTCGACGGCCTCCTCGAAGCCACCGT
CGAACGCCTCCACCAAGTTCTCGACGGAAGAAACGCCGCTGCCGTCTTCA
ACGCTGCCGCAATGGCCGCCGGCGGTGGCCGAGGCACCGGCTTCACAAGT
GGCCCCGGCGGCACCCTGGAGGCGCTGAACGGCGCCCACGCCGGCCACGA
ATCCTCCTCCGGTACCGGAACCACCACCTCCCAGAGCCACCTCACCTCCG
ATTCCTCCGACACCGAACACGGCACCTCCGCCCTCTCTGTTGCCAGCAGC
GCCAGCGGCGTCATGGGCTCGCGCGGCATCCCCCTCCGCATCAACACCAA
CATCTTCAGCCGCCGGCACCGCAGCAACGCCGGCGTAGACCGGGACCGCG
AGGACTCCATGAGCAATGCCAGCATTTCCACCTCAGCCTCCACCAACACC
AGCTTCGACCACTCCGACTCCGAAATGGGCGGCGACCCGACCCGTCCGTC
CCACCACCGCCGCAACACCGACGCAGAACTCCGTCCCGAACGCGAGATCT
GGACCGGAGACCTCAGCAGCGTCATCGGTCTTCAGAAGCGCGGTCTCCGC
GGTCTCATGGAAGGTCGGAGGCTCCGGGAACGCAACAATAAACCTGCTGG
CGCAGCCGATCATGTTGCTACTGCTGTTGCTCCACCGCCTGGCGCGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008638KJC3_008638Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008638-T1.cdsKJC3_008638-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008638-T1.exon1KJC3_008638-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008638-T1KJC3_008638-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015915
DBxrefPFAM:PF13854
DBxrefPFAM:PF13418
DBxrefPFAM:PF13415
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2576505..2579153 -
Powered by Drupal