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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2593585..2595968+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008642-T1 ID=KJC3_008642-T1|Name=KJC3_008642-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2384bp|location=Sequence derived from alignment at ch6:2593585..2595968+ (Aspergillus niger KJC3)
CCTAAACTAACCGCTACTGGCTGTCGCCATATTTTCCAGACTGCCACAAT
GCTCCAGGGAGACCCCCCCCGGGTGCATTCCTATTTGTCCGTAACATCGC
CCCGTATGTGATTTTACTCCACCGCGACCCTTGTCTGGAACAAATGAGGC
GGCACACGGGAAGCCTGCCGCACCCTGTCACTGACAGCAACAAGGCTGGC
TGGCGTCATGGTGAGACTCCAATCAATTAGCCCGATCAAACTCATTCGCC
GGTGGGTAACTGGGCTTCCTCTTCCTTCTCGTCTTTGCTTTTCCTGGACA
TTCATTCGATAAGTTTTCCCACGTTTGCTGTGACGAAACTGTTGGTCCAG
ATAGCTGATACCAGTTCACATGACAGGTGATAGTCAGCTTCATTGAGTGG
AGTCGGGCCTGGATGGTGTGGGTTTCAATAATCGTATCCACCAAAAACCC
GACGGTCTCAATAGTAAAAGGGCCATCGAGCCGGGTGTTTGGAATACTTT
TCTGGGCCGTGAGATACACGGACATCCGATGAGACACTATGTCTATTTAT
TGGCACGACGAGCAGGAGGCCGAGCTTCAGCTGAAACCGACGCGGTTTGC
TTAGTCCAGACCTGATTAGCACCTGTGGCACCTGGATTGGGCCACCCACC
GGTGAAAGTACCGACTAACTTGACACGGAGCAATGGCCCGATGGGCAATG
CCAGCTTGCCAGACTACCAGACTGCCAGTACGTGGATAGTAGACTAGCAC
CGTAACTCAGAGAAGCCACCCAGCTAGCCCCACTAGCCATGAGCTCCCTA
ACGCTAAGGTAGAATCAGAAAAGTGTTCGATGAGATTCGTGCGGGGGCGA
CTGGCGACTGGGCTTGGCAACCGAGGACAACGCCGAAAGCTGCCCATGAG
ACTTTCGACTATCGAATCTCTCTTTTGGGCTGAATTCCTCAGCACTCACA
CAACGGTTCCAGTCTCCAGCAACCGTCTGGTTTTAGCCGCCGCGCATATT
CCTTAAACTGACTAGGCTGTCTCGACCCAGCAGAGTCCACGGCTGCTCCC
GATCTGATCCCCATATCTGAACCACCAGTTCTGAGGGTTGCACATCAGCC
TGCCGTCAAAATGTCCGGCTTCCAGTACCAAAAGTGGACGGTCTCTGAGG
TATGGTATCTCACATTCATTTTTGAGTGAAGGCGACCGGCCGAAGGAGAC
AAGAATGGGGAAGCTAATGCTCGCACTGGTTTCTGTATGCAGCCGTATGT
CGATGTACCGGGAACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGA
ATGAGTTTCGCTTCGTCGATATCTGGGAGCAGAAACTATACGTTCTGGAC
CTGGCCAAAGGGCCCGACTCCCTGAAGATCATGGACACATCTGTGTCAAT
CGGGTATGTCGCTCCTAGCTAGACTCCTTGGCCCACAGAATAATTACACC
GTAAGCGGTGCCCAAAAAGACACTAATCTCATACTCCGAACAATATGTAG
AGTAACCGCCAACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCG
TCGTAGCCGCAAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCA
CTGTCCTATATTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGGTA
AGTCAATTATCTAGTTTCTTTGCCATCATCCTCGTGGGTCTGACTCATCG
GGAACGTCATCAAAACAGAATGCGTTTCAACGATGGGGCCGTCGACAGCC
ACGGACGGTTCTGGGCTGGAGCCATGAACGATTCCAAGGTGCAGAACCCA
GTCAACGAAGGTGTGATATTCAGGTTAGACCCGGACATGAAACTGCACCG
CATGGTTGAACAGGTGACGATTCCCAACGGGATTGGCTGGAATCCTGCGG
ATGACACTATGTACCTGACCGACTCTCCCACCGGCAAGATTTACGCCTTT
GATTTCGATGCTGAGACCGGAAACATCAGCAACCGAAGGGTGTTCTTTGA
CATTGGGGAGCCAAAAGAGCCGGATGGGTTTGCCATCGATGAGGAGGGGT
GTATATGGAGTGCAATTTACGGTGGTGGGAAGGTGATTCGTATCTCGCCG
GAGGGCAAGATCATTGGCGAGATAACTTTTCCCACCCGAAACATTACCTG
TCCAGCTTTTGTGGGAACGGAACTCTTCATCACGACCGCCAAGGATGATA
CCAATGATGACCAGTTTCCGGAATCCGTCCGGTATGGAGGCCGGCTCTAT
AGAGTCGACGTCGGCATCAAGGGTAAGCCTAAGAATGAGTTTCGACTCGA
AGGCAGCCCGTTATAGGTAGTATTCGATAGACTAGCGTAATTAGTTAACT
GCTAAAGATAAGCCGATCTGACCGCTTGTCGAAC back to topCoding sequence (CDS) from alignment at ch6:2593585..2595968+ >KJC3_008642-T1 ID=KJC3_008642-T1|Name=KJC3_008642-T1|organism=Aspergillus niger KJC3|type=CDS|length=3780bp|location=Sequence derived from alignment at ch6:2593585..2595968+ (Aspergillus niger KJC3)
ATGTCCGGCTTCCAGTACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGA
TGTACCGGGAACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATG
AGTTTCGCTTCGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTG
GCCAAAGGGCCCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGG
AGTAACCGCCAACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCG
TCGTAGCCGCAAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCA
CTGTCCTATATTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGAAT
GCGTTTCAACGATGGGGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAG
CCATGAACGATTCCAAGGTGCAGAACCCAGTCAACGAAGGTGTGATATTC
AGGTTAGACCCGGACATGAAACTGCACCGCATGGTTGAACAGGTGACGAT
TCCCAACGGGATTGGCTGGAATCCTGCGGATGACACTATGTACCTGACCG
ACTCTCCCACCGGCAAGATTTACGCCTTTGATTTCGATGCTGAGACCGGA
AACATCAGCAACCGAAGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCC
GGATGGGTTTGCCATCGATGAGGAGGGGTGTATATGGAGTGCAATTTACG
GTGGTGGGAAGGTGATTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAG
ATAACTTTTCCCACCCGAAACATTACCTGTCCAGCTTTTGTGGGAACGGA
ACTCTTCATCACGACCGCCAAGGATGATACCAATGATGACCAGTTTCCGG
AATCCGTCCGGTATGGAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAG
GGTAAGCCTAAGAATGAGTTTCGACTCGAAGGCAGCCCGTTATAGATGTC
CGGCTTCCAGTACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGATGTAC
CGGGAACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTT
CGCTTCGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAA
AGGGCCCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGGAGTAA
CCGCCAACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTA
GCCGCAAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTC
CTATATTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGAATGCGTT
TCAACGATGGGGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAGCCATG
AACGATTCCAAGGTGCAGAACCCAGTCAACGAAGGTGTGATATTCAGGTT
AGACCCGGACATGAAACTGCACCGCATGGTTGAACAGGTGACGATTCCCA
ACGGGATTGGCTGGAATCCTGCGGATGACACTATGTACCTGACCGACTCT
CCCACCGGCAAGATTTACGCCTTTGATTTCGATGCTGAGACCGGAAACAT
CAGCAACCGAAGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCCGGATG
GGTTTGCCATCGATGAGGAGGGGTGTATATGGAGTGCAATTTACGGTGGT
GGGAAGGTGATTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAGATAAC
TTTTCCCACCCGAAACATTACCTGTCCAGCTTTTGTGGGAACGGAACTCT
TCATCACGACCGCCAAGGATGATACCAATGATGACCAGTTTCCGGAATCC
GTCCGGTATGGAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAGGGTAA
GCCTAAGAATGAGTTTCGACTCGAAGGCAGCCCGTTATAGATGTCCGGCT
TCCAGTACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGATGTACCGGGA
ACCTTATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTTCGCTT
CGTCGATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAAAGGGC
CCGACTCCCTGAAGATCATGGACACATCTGTGTCAATCGGAGTAACCGCC
AACATTGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTAGCCGC
AAAACATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTCCTATA
TTCAGAAAGTGTGGGACGATCCGGCCAAGGAGCATAGAATGCGTTTCAAC
GATGGGGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAGCCATGAACGA
TTCCAAGGTGCAGAACCCAGTCAACGAAGGTGTGATATTCAGGTTAGACC
CGGACATGAAACTGCACCGCATGGTTGAACAGGTGACGATTCCCAACGGG
ATTGGCTGGAATCCTGCGGATGACACTATGTACCTGACCGACTCTCCCAC
CGGCAAGATTTACGCCTTTGATTTCGATGCTGAGACCGGAAACATCAGCA
ACCGAAGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCCGGATGGGTTT
GCCATCGATGAGGAGGGGTGTATATGGAGTGCAATTTACGGTGGTGGGAA
GGTGATTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAGATAACTTTTC
CCACCCGAAACATTACCTGTCCAGCTTTTGTGGGAACGGAACTCTTCATC
ACGACCGCCAAGGATGATACCAATGATGACCAGTTTCCGGAATCCGTCCG
GTATGGAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAGGGTAAGCCTA
AGAATGAGTTTCGACTCGAAGGCAGCCCGTTATAGATGTCCGGCTTCCAG
TACCAAAAGTGGACGGTCTCTGAGCCGTATGTCGATGTACCGGGAACCTT
ATTGGAAGGACCGTTTCACGACAAGACCAAGAATGAGTTTCGCTTCGTCG
ATATCTGGGAGCAGAAACTATACGTTCTGGACCTGGCCAAAGGGCCCGAC
TCCCTGAAGATCATGGACACATCTGTGTCAATCGGAGTAACCGCCAACAT
TGCGAATGCTGGAGATTCACGCGAGAACCAGATCGTCGTAGCCGCAAAAC
ATGGATTCGCCCTGGTCGACCGCACCACGGGCGCACTGTCCTATATTCAG
AAAGTGTGGGACGATCCGGCCAAGGAGCATAGAATGCGTTTCAACGATGG
GGCCGTCGACAGCCACGGACGGTTCTGGGCTGGAGCCATGAACGATTCCA
AGGTGCAGAACCCAGTCAACGAAGGTGTGATATTCAGGTTAGACCCGGAC
ATGAAACTGCACCGCATGGTTGAACAGGTGACGATTCCCAACGGGATTGG
CTGGAATCCTGCGGATGACACTATGTACCTGACCGACTCTCCCACCGGCA
AGATTTACGCCTTTGATTTCGATGCTGAGACCGGAAACATCAGCAACCGA
AGGGTGTTCTTTGACATTGGGGAGCCAAAAGAGCCGGATGGGTTTGCCAT
CGATGAGGAGGGGTGTATATGGAGTGCAATTTACGGTGGTGGGAAGGTGA
TTCGTATCTCGCCGGAGGGCAAGATCATTGGCGAGATAACTTTTCCCACC
CGAAACATTACCTGTCCAGCTTTTGTGGGAACGGAACTCTTCATCACGAC
CGCCAAGGATGATACCAATGATGACCAGTTTCCGGAATCCGTCCGGTATG
GAGGCCGGCTCTATAGAGTCGACGTCGGCATCAAGGGTAAGCCTAAGAAT
GAGTTTCGACTCGAAGGCAGCCCGTTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008642-T1.utr3p1 | KJC3_008642-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013658 |
| DBxref | InterPro:IPR011042 |
| DBxref | InterPro:IPR005511 |
| DBxref | PFAM:PF08450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2593585..2595968 + |
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