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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2624611..2626854- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008653-T1 ID=KJC3_008653-T1|Name=KJC3_008653-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2244bp|location=Sequence derived from alignment at ch6:2624611..2626854- (Aspergillus niger KJC3) AGGTAGCTATGGTATGTCGTCTTATAAATACACAAGGCGAGGTCTTCCTA
CGAGATAGTCAAAAAGTGAAAACAAAAAGAAGCATTGTCACTCCAGAACT
CTGCTCTGCTATTCTACCGCTAACCTTACTGTCCTGAGAATCAACATGCC
CGAGATTGCCGGGAAGGAGGTCGGCCCCATAGGCTTTGGCCTTATGGGAT
TAACCTGGAGAGCGACACCACCGTCTCAAGAGCAGGCGTTTGATGCCATG
CATACTGCAATTCAGAAGGGATGTATGTAAGATTTGTGTCTTCATTCTTT
GCTGGTATACAGCTATTTAACCAGCGCTGATCAATGGCAATATAGGTACC
TGTTGGAACGGTGGTGAAAACTACGGCCCACTTGAATACAATAGTCTCGT
TCTACTAGAGCAATATCTCGAGAGATACCCCGAAGATGCCGACAAAATTG
TCCTGAACATCAAGGGTGGCGTGAACCCCGAGACCCACCAGATAGATGCA
TCGCCGGAGAATACACGCCGCAGTCTAGACAACTGCATAGCACAGCTGAA
AAGTCGCAAGAAGATCGATATGTTCGAATTTGCTCGTCGAGACCCGGCCG
TGCCTATGCATGAGACGTTTGCTCTTATTGAGAAGGAGTATGTGCAGACC
GGCAAGATCGAGGGTATTGCCTTGTCGGAGGTGCGGGCTGAGACTATTCA
TGAAGCTGTCAAGTATACTAAGGTGCTTGCTGTGGAGGCTGAGCTTTCTT
TGTAGGATTATTGATATTCTTGCGAAGAAGCAAAGGGGAAATGCTGACTG
GAACAGGTTCACTACTGATATTCTGGAAAACGGCGTCGCAGCGGCCTGCG
CCCAGTACGGTATCCCGATCATTGCCTACTCGCCTATTGGCAGAGGCATG
TTAACTGGTCAGTTCAAGAAGTTTGATGACCTTCCACAGGACTCGCTGTT
GCGCTCTTTCGACTTTCCGCGATTTCAGCGGGAGAATTTCGAGAAGAATA
TGCAGCTGGTACAGAAAGTAGAAGATATCGCTAAGAGGAAGAATTGCACC
CCTGCGCAGCTTGCCATCAACTGGACGAGAGCACTCTCCAGGCGCCCGGG
TGTACCAACCATTATTCCCATTCCGGGTGCCACAACTGCGGAGCGGGTAG
AGGAGAATAGCACGCAAATTGATATCACGGATGAAGAGATGCTGGAGATT
GATGAGATATTGGCCAAGTTCACCCCAGCTGGTGAACGATACCCCGGGGC
CATTCCGGTCAATACATAGGATATGTGGCTACCATAGTAGTACTGTTCAA
ATGGCACTTCCGTAGCATCAAGTGCTACTATCTCAAGTGATGATTCAATG
AAGTAGATTAGTTAGTCGGTGGACGCAGGCCAATAGCCATCTTGTTAGGG
GAGCAGAGGACGCATCTGAATTCTGAACAGACAATTAACTTGCACAAAAA
AGCCCTGTATGACGAGACACGAGGACTGTGCCTCCCAAATGAGCACCGGT
TATCTATTAGAAGCCAGAAGCCGGATTGAAGAGCCATGTGACAGCACCAG
ATCCGGCTTCCCCAGCAACCTCGGGCAGACAGGCATACTATCGCAGTTAG
TACCGTACCTGACGATCGGAGAGACGCCGACCGGTCTGGACTGGCTGGAG
TAAGTTAGTAACTATGTATGCACATGGAAGATTCTAGCATGTAAGATGCA
TCTCATCACTAGGGTGTTAGTAGACAATCAGTACCATCTCAAGTGGGGCA
GATGGTAATCGCTCTTGTATATTGCATCTGTCTCAGGTCTTGGAAGTGAA
GTATAATAGGTATGAGAGACGAGGGGAAAACCCAGCAAGCAAGTTGCAGT
CGCAAGGGCAGCTATTGTGCAATCGAGGCCACGTCAGCCATATGCCGGAG
TTCAATCGGAATGAGAGACAGAAGGGACGGAGTAGCAAGTTGGTGGCTTG
GGGGAGTGAACCTTGGAAGTGAACTTTACCGGTAATAGGATAAGGTATTA
GTATCCTGTGTTAATGTTTCCTGTCAATCGAGAGTTGAAGCTGCCGCGGG
GAGAGAAAAGAAGGGGCAGTGGGGAGTTGGGGGAAATTCTTGCTGGTCAC
ACGCCTCACGCCCCCGCGGCGGCACTATCTATACATAGTAGATGCCTATA
GATAGCAGCAATTAGGCGAGAACTCTAAGTCTTTGAGCCACTGTATTATC
TGCTACCGCTTCAGTCACTATCACGTTCACTTTTCTTATATTGG back to topCoding sequence (CDS) from alignment at ch6:2624611..2626854- >KJC3_008653-T1 ID=KJC3_008653-T1|Name=KJC3_008653-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch6:2624611..2626854- (Aspergillus niger KJC3) GTTCACTACTGATATTCTGGAAAACGGCGTCGCAGCGGCCTGCGCCCAGT ACGGTATCCCGATCATTGCCTACTCGCCTATTGGCAGAGGCATGTTAACT GGTCAGTTCAAGAAGTTTGATGACCTTCCACAGGACTCGCTGTTGCGCTC TTTCGACTTTCCGCGATTTCAGCGGGAGAATTTCGAGAAGAATATGCAGC TGGTACAGAAAGTAGAAGATATCGCTAAGAGGAAGAATTGCACCCCTGCG CAGCTTGCCATCAACTGGACGAGAGCACTCTCCAGGCGCCCGGGTGTACC AACCATTATTCCCATTCCGGGTGCCACAACTGCGGAGCGGGTAGAGGAGA ATAGCACGCAAATTGATATCACGGATGAAGAGATGCTGGAGATTGATGAG ATATTGGCCAAGTTCACCCCAGCTGGTGAACGATACCCCGGGGCCATTCC GGTCAATACATAGGTACCTGTTGGAACGGTGGTGAAAACTACGGCCCACT TGAATACAATAGTCTCGTTCTACTAGAGCAATATCTCGAGAGATACCCCG AAGATGCCGACAAAATTGTCCTGAACATCAAGGGTGGCGTGAACCCCGAG ACCCACCAGATAGATGCATCGCCGGAGAATACACGCCGCAGTCTAGACAA CTGCATAGCACAGCTGAAAAGTCGCAAGAAGATCGATATGTTCGAATTTG CTCGTCGAGACCCGGCCGTGCCTATGCATGAGACGTTTGCTCTTATTGAG AAGGAGTATGTGCAGACCGGCAAGATCGAGGGTATTGCCTTGTCGGAGGT GCGGGCTGAGACTATTCATGAAGCTGTCAAGTATACTAAGGTGCTTGCTG TGGAGGCTGAGCTTTCTTTATGCCCGAGATTGCCGGGAAGGAGGTCGGCC CCATAGGCTTTGGCCTTATGGGATTAACCTGGAGAGCGACACCACCGTCT CAAGAGCAGGCGTTTGATGCCATGCATACTGCAATTCAGAAGGGATGTTC ACTACTGATATTCTGGAAAACGGCGTCGCAGCGGCCTGCGCCCAGTACGG TATCCCGATCATTGCCTACTCGCCTATTGGCAGAGGCATGTTAACTGGTC AGTTCAAGAAGTTTGATGACCTTCCACAGGACTCGCTGTTGCGCTCTTTC GACTTTCCGCGATTTCAGCGGGAGAATTTCGAGAAGAATATGCAGCTGGT ACAGAAAGTAGAAGATATCGCTAAGAGGAAGAATTGCACCCCTGCGCAGC TTGCCATCAACTGGACGAGAGCACTCTCCAGGCGCCCGGGTGTACCAACC ATTATTCCCATTCCGGGTGCCACAACTGCGGAGCGGGTAGAGGAGAATAG CACGCAAATTGATATCACGGATGAAGAGATGCTGGAGATTGATGAGATAT TGGCCAAGTTCACCCCAGCTGGTGAACGATACCCCGGGGCCATTCCGGTC AATACATAGGTACCTGTTGGAACGGTGGTGAAAACTACGGCCCACTTGAA TACAATAGTCTCGTTCTACTAGAGCAATATCTCGAGAGATACCCCGAAGA TGCCGACAAAATTGTCCTGAACATCAAGGGTGGCGTGAACCCCGAGACCC ACCAGATAGATGCATCGCCGGAGAATACACGCCGCAGTCTAGACAACTGC ATAGCACAGCTGAAAAGTCGCAAGAAGATCGATATGTTCGAATTTGCTCG TCGAGACCCGGCCGTGCCTATGCATGAGACGTTTGCTCTTATTGAGAAGG AGTATGTGCAGACCGGCAAGATCGAGGGTATTGCCTTGTCGGAGGTGCGG GCTGAGACTATTCATGAAGCTGTCAAGTATACTAAGGTGCTTGCTGTGGA GGCTGAGCTTTCTTTATGCCCGAGATTGCCGGGAAGGAGGTCGGCCCCAT AGGCTTTGGCCTTATGGGATTAACCTGGAGAGCGACACCACCGTCTCAAG AGCAGGCGTTTGATGCCATGCATACTGCAATTCAGAAGGGATGTTCACTA CTGATATTCTGGAAAACGGCGTCGCAGCGGCCTGCGCCCAGTACGGTATC CCGATCATTGCCTACTCGCCTATTGGCAGAGGCATGTTAACTGGTCAGTT CAAGAAGTTTGATGACCTTCCACAGGACTCGCTGTTGCGCTCTTTCGACT TTCCGCGATTTCAGCGGGAGAATTTCGAGAAGAATATGCAGCTGGTACAG AAAGTAGAAGATATCGCTAAGAGGAAGAATTGCACCCCTGCGCAGCTTGC CATCAACTGGACGAGAGCACTCTCCAGGCGCCCGGGTGTACCAACCATTA TTCCCATTCCGGGTGCCACAACTGCGGAGCGGGTAGAGGAGAATAGCACG CAAATTGATATCACGGATGAAGAGATGCTGGAGATTGATGAGATATTGGC CAAGTTCACCCCAGCTGGTGAACGATACCCCGGGGCCATTCCGGTCAATA CATAGGTACCTGTTGGAACGGTGGTGAAAACTACGGCCCACTTGAATACA ATAGTCTCGTTCTACTAGAGCAATATCTCGAGAGATACCCCGAAGATGCC GACAAAATTGTCCTGAACATCAAGGGTGGCGTGAACCCCGAGACCCACCA GATAGATGCATCGCCGGAGAATACACGCCGCAGTCTAGACAACTGCATAG CACAGCTGAAAAGTCGCAAGAAGATCGATATGTTCGAATTTGCTCGTCGA GACCCGGCCGTGCCTATGCATGAGACGTTTGCTCTTATTGAGAAGGAGTA TGTGCAGACCGGCAAGATCGAGGGTATTGCCTTGTCGGAGGTGCGGGCTG AGACTATTCATGAAGCTGTCAAGTATACTAAGGTGCTTGCTGTGGAGGCT GAGCTTTCTTTATGCCCGAGATTGCCGGGAAGGAGGTCGGCCCCATAGGC TTTGGCCTTATGGGATTAACCTGGAGAGCGACACCACCGTCTCAAGAGCA GGCGTTTGATGCCATGCATACTGCAATTCAGAAGGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008653-T1.utr3p1 | KJC3_008653-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008653-T1.utr5p1 | KJC3_008653-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036812 |
DBxref | InterPro:IPR023210 |
DBxref | PFAM:PF00248 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2624611..2626854 - |
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