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KJC3_008664-T1, KJC3_008664-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008664-T1
Unique NameKJC3_008664-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2658160..2659387-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008664-T1 ID=KJC3_008664-T1|Name=KJC3_008664-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1228bp|location=Sequence derived from alignment at ch6:2658160..2659387- (Aspergillus niger KJC3)
CCGCCTGCCGGAAAAAAGAGTTGGGCGCGGGGCAACTCACTTTTCGATTT
CTCCTCGACTACCCTGACTGTTAGCCAGCGAATAGAACATCTTTTCTACC
TCTACGTTCTTCTTGTGATATTGTTTGCTTCTTGTGTTATTATTTATCGC
CCACACAACCGCCAAGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGA
ACTTTGAGGATGTATGTCGCCTTTGCGCCCGGATCGCCTATTCAGAAACC
CAACCAGGAATGCTGACTTTTGGTGCAGATGGAGAAGCAGTTTGCCGTTA
AGGGTTGGTCCGGACATCTCTTTTTCGAACTCGTCTCATGACTCACGATT
ATGCAGCTGTTGAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTC
CCCGGCTCGCAACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTC
TTTCCAGAAGGAATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAG
ACAAGATGAAGAGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAAC
CAGTATGAGAAGATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGC
TAGCCCCAACGTCGAATACGACAGAGATACCACGATCTTCGGTAGGTGAT
ACATGGCTGTGTGGCTTGTCTGGGGGGTGGAACGCCAGCTAACAGAAGGA
TAGCCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGGTGAGTCCTT
TCGTTTGGATAAGCACCGACAGCAATTGGATACTTATACATGGATTAGAA
ACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTAAG
AAATAAATCTGAAGCTGCGCTTCTTTTTCTGGGCCGTGCAGGAACGACGG
CTAGACGGAATGGTTCACCCGGGCCTTTACCGTATTTGATTTGCAAGCGT
CTAGAGACTATGCAATGACGCGAGTCACTGGGTTCGACAGCCATCCTTTA
GTACCTTGGCCCATAGGTCTCATCCGGGGTGGTCCAGCATAGTGTATATG
ACCCTATAAAAGAGTGGGGATAGCCCCTCGACCGGGTACCCTAGGGTGCT
ACTACCGGAGTGGATACCTGTAAATATACCGAGCTGAATCAATGCTTTGG
AATGAAGTGATGGATAGAAAGACGTTTGGTTGACCCACTAAATCATTTCT
GTGTACCCGAGAACAATGGCAACGCAAC
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Coding sequence (CDS) from alignment at ch6:2658160..2659387-

>KJC3_008664-T1 ID=KJC3_008664-T1|Name=KJC3_008664-T1|organism=Aspergillus niger KJC3|type=CDS|length=2250bp|location=Sequence derived from alignment at ch6:2658160..2659387- (Aspergillus niger KJC3)
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
AAACCGTGCTGGTCTCAACGACTGGATCTACGAGCGCGCGCAGAAGGCTA
AGAAATAACCATGCGTATGCAGTTTTACGCCATCGAGATCGCCAGCTGTT
GAACATCTGATGACATATTGGTCGATTCTGGAGAAGGTCCCCGGCTCGCA
ACTCCGCCTGACGAAGATGGACGATGATATCCTCGAGTCTTTCCAGAAGG
AATTCCCCGACTTTGACCCTGCCGAGACGCTTAACGAAGACAAGATGAAG
AGCAAGGAGGGCAAGGAGAAGTGGCGTAACTGGATTAACCAGTATGAGAA
GATTATCGAGGACTTCAACTTCGGAACCATGCTGCGTGCTAGCCCCAACG
TCGAATACGACAGAGATACCACGATCTTCGATGGAGAAGCAGTTTGCCGT
TAAGGATGTCGAAGCCTTTTGATCCAGAGACGGCGGAGAACTTTGAGGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008664KJC3_008664Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008664-T1KJC3_008664-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008664-T1.cdsKJC3_008664-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008664-T1.utr3p1KJC3_008664-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008664-T1.exon5KJC3_008664-T1.exon5Aspergillus niger KJC3exon
KJC3_008664-T1.exon4KJC3_008664-T1.exon4Aspergillus niger KJC3exon
KJC3_008664-T1.exon3KJC3_008664-T1.exon3Aspergillus niger KJC3exon
KJC3_008664-T1.exon2KJC3_008664-T1.exon2Aspergillus niger KJC3exon
KJC3_008664-T1.exon1KJC3_008664-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008664-T1.utr5p1KJC3_008664-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926506Z
DBxrefInterPro:IPR023139
DBxrefInterPro:IPR021148
DBxrefPFAM:PF04669
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2658160..2659387 -
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