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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2687915..2691122+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008676-T1 ID=KJC3_008676-T1|Name=KJC3_008676-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3208bp|location=Sequence derived from alignment at ch6:2687915..2691122+ (Aspergillus niger KJC3)
CTCCATTCTAATGGCTATTTTCATCGAATAATCAACTCATCAATAATCCA
CCATGCCAAGGATTATTCCATCATGACATGCAGTCACTTGTTTTGCTGCT
ACGCGGGCTGTGCTGCTTCCCAAGCGGGATCCAAAAGCTGCTCACCGAGT
TGCTGAGCAACACATCCAAGGCAAGAGTCAACGTCAACCGCGTCCCCCTA
CTCCGCACTGCAAGTTGTGTATGCTTCGAGTCCAAACCCTTCTGAGCATA
ATGCAAGGCACCCTTCCCCGGTTAATCCCAGGATCCTCATCCTTCCCTGT
TGTTAGGCCGTGATGGTGGCTATAGCTCCCCCTCCATATCCCTCCGGACT
TACGCGGACTGTGCTTGATACTTGCACTCAAGACTGATTGCTTATGTCGA
GCATAGAGCATTGTCGCTTACCTTGCGTTCCCGGTTTTCCGCTGTGAGCG
ATTATGAATAGAAGCAGGCCCGTGGGTGTCCTACCCATGTTCCTTGTATG
GATAACAACAATGCTCGCTATGTATGGCTGAATGGCTTGTTGTACCGTGG
GTGGCATTGCCATCTCGCCACCGGACTCGCAATAACCCGCCTAAGTCCAT
GAGTCCGGAAGGTCTTGACCAGGGCAGGGTTCCCGGCCGATCCAAAGGCT
GCTCGATGGAGCTGGATCCACAGTTGGCTTGTGCCCTGCATCGCCCGAGC
CACTGATACCGCTTCTATCTTATAGCCAACTTCCAGATCGGGTATTTCTC
ATAGAATTTCCCCCTCCACAAGGCCCCAATGCTCATGACGTCTGCTTTCA
TTGCTCCTTCAATCCCGAAGCTTCCAGGCCCGGCGTTGTCGGACAACTTG
CAGCTTGTTTATTCGCTGTCCGGTGGTGCCTAGCGGGATCAACGGTGGCC
CTTCATGTTCTTTTCCATGGTCAACTGCCAGTCCAGCAGAAGCAATGCAA
CTGGCTGAATGTCTGTTTCTATTTTTTCGAACTGCTGTGCTGTGGAGGCG
TGCGTGTTGAGTCTGTCCGGTTTACACAGTATCACCGGCAATTGCCCATG
ACGTGCCTTTTATGTACCCACTATAGTTTATAAATATTGAGCGTACCCTG
GGCTTTTCAGTTTGCTTGTTAGTTTACCCCGGCCAATAACTTTCCCAAAA
AACAATCTTTATTCTTATATCGCCCTTCCAATCCGTTCGCTTGCTTTCTA
GCTGTCGTCTACTTTCGCTTTTGCAAGTATGAAGAACGTTGCGACCCTTG
CAGCCTTCGCTGCTGGGGCTAATGCCCTTGTTGGCCGGAGCGACTCTTGC
TGCTTTCACCTGACAGCTTCTGGTGATGCTTCTGGCACCATTGGCCAGCT
GGGTGATGGTCAGAACCGCATTGGTGGTGGACTGCCCGCCACCCAGTTCT
GCATTGACTCCAATGGTGGCATCACTGATAGCAGCGGACGCGGTTGTGTC
GTGACTAGTAAGCTATCCACATATACATAATATCAGGTATGTTACTAACC
ACACATGTTGACAGGCGATACCACGCAGTTCCAGTGTGACTTGGGTAAAT
CTCCTATGTCGGGTTTCTCCATCACCTCCTCTGGTGAGCTGGAGTACAAC
GGTGACGCCGATTTTGTTGCCTGCCAAACTGGCGACAACAACGAACTGAA
CCTTTACACCACCGAGAACTCCTCCGTCACTGGCTGCGAGAACATCAAGT
TGACAGCTGATTCCTGCGCGGGCTCTGGTGCTGGTTCTGTTGGTTCTAGC
TCTGCTCCGGCTTCGACCCCCGCGCCTCAGTCCAGCACGCCGGCTCCTGC
TCCTTCCTCCAGCGCTCCAGGTGTCCCTGGCGCTGGTGCGTCGACTGGTT
GGGTTCCCGGTGGTCCTGCCTCCAGTGCTTCCGTGCCCTACGGTCCTGGT
CCCCAGTCTAGCGGCGCCGTGCAAGTGACGACCGTCTATGTGACTGAAAC
CTACTGTGGTGCTGAGACTACTCCTGTGGTTTCTGTTCCTGGGGAGAGTA
CTGTTCCGCTGGTTCCCGTTGGACCCGGGTCTTCTGCTCCCGCTGGCTCC
CAGCCGGCCCCGTCCGGATCCCCTGCTCCTCAGCCATCCGAGACTCCATC
CTACCCTCAGTCGTCCGAAAGCCCTGCTCCTCAGCCTTCGGAAACTCCTT
CGTACCCCCAGTCCTCGGAGACCCCGGCCCCCCAGCCTTCTGAGACTCCC
GCTCCTCAGCCCTCTGGCTCTCCTGCTCCTCAGCCATCCGGGTCTCCGGC
TCCCCAGCCTTCCTCCTACCCCCAGACCTCTGGAACTCCTGCTCCTCAGC
CGTCTGGTACTCCCTCTTACCCCCAGACCTCCGCGTCTCCCAGCAGCGCT
CAGCCTTCTGGCACGGCTACCCAGTCGTCCTCTGCCAGCTGCCCCACCGA
TCTCTCTGGCGACTATGAGTACCCTCACTTGATCGTCCCCATCAACTCTT
CTACTCCCGACACCGCCTACGGTACTCAGTACTTCGGCACCGTCTCCTCC
ACCGTCTCGACCATCTTCAACTTCGATATCCCCTCTTCGGACTCTGGAAA
GACCTGCAGTCTGATCTTCCTGTTCCCCACCAAGGATCAGCTTGAGACCT
CTGACTACACCTTCAGCGGAGACGGCAAGATTGACTTCTCCCAGCTCGAG
TCTGCTGCTAGTGAGTCGACGACCTACAACAACGCTCCTGGGGTCAAGCA
GGACTACGGCGACTTCACCGTCTCGCCTGGCAACTCCTACCTGATCTCCA
CGTTCTCCTGCCCGGCTGGCCAGACTGTCAGCTACGAGATGAAGGAGGCT
GGTAGCACCTACCTCAACTTCTTTGAGGACTACAACCCCTCTCCGTAAGT
ATTCTCCATACCATCTTCTATGAACCATTGCTAATTGAAATCTAGTCTCG
GTCTGTACATCACGGTCTGCTAAGCTCGTCAGACATAGCGATCGCATCCG
GCATCACGCGAATATGATTAATGGACCCGTTATGTTTTCTATTTATTGAT
TTTTATTCCCTTTAGTTTTAAGACATGACCATTCCTTCTTTTGATACTTA
ACCGGGCGCCGGATACGGTCTCTGACCGGAGAAAATACTGATATTGGAAA
TACAAAAATTGGCTATATCAAGGATATTTTTCGGCTAGTAGCGGTGTATT
ATAAGCTATAGCTCTCGGGTCTAATTACATTAATCAATTGTGCCTATCAG
ACATTTGA back to topCoding sequence (CDS) from alignment at ch6:2687915..2691122+ >KJC3_008676-T1 ID=KJC3_008676-T1|Name=KJC3_008676-T1|organism=Aspergillus niger KJC3|type=CDS|length=4761bp|location=Sequence derived from alignment at ch6:2687915..2691122+ (Aspergillus niger KJC3)
ATGAAGAACGTTGCGACCCTTGCAGCCTTCGCTGCTGGGGCTAATGCCCT
TGTTGGCCGGAGCGACTCTTGCTGCTTTCACCTGACAGCTTCTGGTGATG
CTTCTGGCACCATTGGCCAGCTGGGTGATGGTCAGAACCGCATTGGTGGT
GGACTGCCCGCCACCCAGTTCTGCATTGACTCCAATGGTGGCATCACTGA
TAGCAGCGGACGCGGTTGTGTCGTGACTAGCGATACCACGCAGTTCCAGT
GTGACTTGGGTAAATCTCCTATGTCGGGTTTCTCCATCACCTCCTCTGGT
GAGCTGGAGTACAACGGTGACGCCGATTTTGTTGCCTGCCAAACTGGCGA
CAACAACGAACTGAACCTTTACACCACCGAGAACTCCTCCGTCACTGGCT
GCGAGAACATCAAGTTGACAGCTGATTCCTGCGCGGGCTCTGGTGCTGGT
TCTGTTGGTTCTAGCTCTGCTCCGGCTTCGACCCCCGCGCCTCAGTCCAG
CACGCCGGCTCCTGCTCCTTCCTCCAGCGCTCCAGGTGTCCCTGGCGCTG
GTGCGTCGACTGGTTGGGTTCCCGGTGGTCCTGCCTCCAGTGCTTCCGTG
CCCTACGGTCCTGGTCCCCAGTCTAGCGGCGCCGTGCAAGTGACGACCGT
CTATGTGACTGAAACCTACTGTGGTGCTGAGACTACTCCTGTGGTTTCTG
TTCCTGGGGAGAGTACTGTTCCGCTGGTTCCCGTTGGACCCGGGTCTTCT
GCTCCCGCTGGCTCCCAGCCGGCCCCGTCCGGATCCCCTGCTCCTCAGCC
ATCCGAGACTCCATCCTACCCTCAGTCGTCCGAAAGCCCTGCTCCTCAGC
CTTCGGAAACTCCTTCGTACCCCCAGTCCTCGGAGACCCCGGCCCCCCAG
CCTTCTGAGACTCCCGCTCCTCAGCCCTCTGGCTCTCCTGCTCCTCAGCC
ATCCGGGTCTCCGGCTCCCCAGCCTTCCTCCTACCCCCAGACCTCTGGAA
CTCCTGCTCCTCAGCCGTCTGGTACTCCCTCTTACCCCCAGACCTCCGCG
TCTCCCAGCAGCGCTCAGCCTTCTGGCACGGCTACCCAGTCGTCCTCTGC
CAGCTGCCCCACCGATCTCTCTGGCGACTATGAGTACCCTCACTTGATCG
TCCCCATCAACTCTTCTACTCCCGACACCGCCTACGGTACTCAGTACTTC
GGCACCGTCTCCTCCACCGTCTCGACCATCTTCAACTTCGATATCCCCTC
TTCGGACTCTGGAAAGACCTGCAGTCTGATCTTCCTGTTCCCCACCAAGG
ATCAGCTTGAGACCTCTGACTACACCTTCAGCGGAGACGGCAAGATTGAC
TTCTCCCAGCTCGAGTCTGCTGCTAGTGAGTCGACGACCTACAACAACGC
TCCTGGGGTCAAGCAGGACTACGGCGACTTCACCGTCTCGCCTGGCAACT
CCTACCTGATCTCCACGTTCTCCTGCCCGGCTGGCCAGACTGTCAGCTAC
GAGATGAAGGAGGCTGGTAGCACCTACCTCAACTTCTTTGAGGACTACAA
CCCCTCTCCTCTCGGTCTGTACATCACGGTCTGCTAAATGAAGAACGTTG
CGACCCTTGCAGCCTTCGCTGCTGGGGCTAATGCCCTTGTTGGCCGGAGC
GACTCTTGCTGCTTTCACCTGACAGCTTCTGGTGATGCTTCTGGCACCAT
TGGCCAGCTGGGTGATGGTCAGAACCGCATTGGTGGTGGACTGCCCGCCA
CCCAGTTCTGCATTGACTCCAATGGTGGCATCACTGATAGCAGCGGACGC
GGTTGTGTCGTGACTAGCGATACCACGCAGTTCCAGTGTGACTTGGGTAA
ATCTCCTATGTCGGGTTTCTCCATCACCTCCTCTGGTGAGCTGGAGTACA
ACGGTGACGCCGATTTTGTTGCCTGCCAAACTGGCGACAACAACGAACTG
AACCTTTACACCACCGAGAACTCCTCCGTCACTGGCTGCGAGAACATCAA
GTTGACAGCTGATTCCTGCGCGGGCTCTGGTGCTGGTTCTGTTGGTTCTA
GCTCTGCTCCGGCTTCGACCCCCGCGCCTCAGTCCAGCACGCCGGCTCCT
GCTCCTTCCTCCAGCGCTCCAGGTGTCCCTGGCGCTGGTGCGTCGACTGG
TTGGGTTCCCGGTGGTCCTGCCTCCAGTGCTTCCGTGCCCTACGGTCCTG
GTCCCCAGTCTAGCGGCGCCGTGCAAGTGACGACCGTCTATGTGACTGAA
ACCTACTGTGGTGCTGAGACTACTCCTGTGGTTTCTGTTCCTGGGGAGAG
TACTGTTCCGCTGGTTCCCGTTGGACCCGGGTCTTCTGCTCCCGCTGGCT
CCCAGCCGGCCCCGTCCGGATCCCCTGCTCCTCAGCCATCCGAGACTCCA
TCCTACCCTCAGTCGTCCGAAAGCCCTGCTCCTCAGCCTTCGGAAACTCC
TTCGTACCCCCAGTCCTCGGAGACCCCGGCCCCCCAGCCTTCTGAGACTC
CCGCTCCTCAGCCCTCTGGCTCTCCTGCTCCTCAGCCATCCGGGTCTCCG
GCTCCCCAGCCTTCCTCCTACCCCCAGACCTCTGGAACTCCTGCTCCTCA
GCCGTCTGGTACTCCCTCTTACCCCCAGACCTCCGCGTCTCCCAGCAGCG
CTCAGCCTTCTGGCACGGCTACCCAGTCGTCCTCTGCCAGCTGCCCCACC
GATCTCTCTGGCGACTATGAGTACCCTCACTTGATCGTCCCCATCAACTC
TTCTACTCCCGACACCGCCTACGGTACTCAGTACTTCGGCACCGTCTCCT
CCACCGTCTCGACCATCTTCAACTTCGATATCCCCTCTTCGGACTCTGGA
AAGACCTGCAGTCTGATCTTCCTGTTCCCCACCAAGGATCAGCTTGAGAC
CTCTGACTACACCTTCAGCGGAGACGGCAAGATTGACTTCTCCCAGCTCG
AGTCTGCTGCTAGTGAGTCGACGACCTACAACAACGCTCCTGGGGTCAAG
CAGGACTACGGCGACTTCACCGTCTCGCCTGGCAACTCCTACCTGATCTC
CACGTTCTCCTGCCCGGCTGGCCAGACTGTCAGCTACGAGATGAAGGAGG
CTGGTAGCACCTACCTCAACTTCTTTGAGGACTACAACCCCTCTCCTCTC
GGTCTGTACATCACGGTCTGCTAAATGAAGAACGTTGCGACCCTTGCAGC
CTTCGCTGCTGGGGCTAATGCCCTTGTTGGCCGGAGCGACTCTTGCTGCT
TTCACCTGACAGCTTCTGGTGATGCTTCTGGCACCATTGGCCAGCTGGGT
GATGGTCAGAACCGCATTGGTGGTGGACTGCCCGCCACCCAGTTCTGCAT
TGACTCCAATGGTGGCATCACTGATAGCAGCGGACGCGGTTGTGTCGTGA
CTAGCGATACCACGCAGTTCCAGTGTGACTTGGGTAAATCTCCTATGTCG
GGTTTCTCCATCACCTCCTCTGGTGAGCTGGAGTACAACGGTGACGCCGA
TTTTGTTGCCTGCCAAACTGGCGACAACAACGAACTGAACCTTTACACCA
CCGAGAACTCCTCCGTCACTGGCTGCGAGAACATCAAGTTGACAGCTGAT
TCCTGCGCGGGCTCTGGTGCTGGTTCTGTTGGTTCTAGCTCTGCTCCGGC
TTCGACCCCCGCGCCTCAGTCCAGCACGCCGGCTCCTGCTCCTTCCTCCA
GCGCTCCAGGTGTCCCTGGCGCTGGTGCGTCGACTGGTTGGGTTCCCGGT
GGTCCTGCCTCCAGTGCTTCCGTGCCCTACGGTCCTGGTCCCCAGTCTAG
CGGCGCCGTGCAAGTGACGACCGTCTATGTGACTGAAACCTACTGTGGTG
CTGAGACTACTCCTGTGGTTTCTGTTCCTGGGGAGAGTACTGTTCCGCTG
GTTCCCGTTGGACCCGGGTCTTCTGCTCCCGCTGGCTCCCAGCCGGCCCC
GTCCGGATCCCCTGCTCCTCAGCCATCCGAGACTCCATCCTACCCTCAGT
CGTCCGAAAGCCCTGCTCCTCAGCCTTCGGAAACTCCTTCGTACCCCCAG
TCCTCGGAGACCCCGGCCCCCCAGCCTTCTGAGACTCCCGCTCCTCAGCC
CTCTGGCTCTCCTGCTCCTCAGCCATCCGGGTCTCCGGCTCCCCAGCCTT
CCTCCTACCCCCAGACCTCTGGAACTCCTGCTCCTCAGCCGTCTGGTACT
CCCTCTTACCCCCAGACCTCCGCGTCTCCCAGCAGCGCTCAGCCTTCTGG
CACGGCTACCCAGTCGTCCTCTGCCAGCTGCCCCACCGATCTCTCTGGCG
ACTATGAGTACCCTCACTTGATCGTCCCCATCAACTCTTCTACTCCCGAC
ACCGCCTACGGTACTCAGTACTTCGGCACCGTCTCCTCCACCGTCTCGAC
CATCTTCAACTTCGATATCCCCTCTTCGGACTCTGGAAAGACCTGCAGTC
TGATCTTCCTGTTCCCCACCAAGGATCAGCTTGAGACCTCTGACTACACC
TTCAGCGGAGACGGCAAGATTGACTTCTCCCAGCTCGAGTCTGCTGCTAG
TGAGTCGACGACCTACAACAACGCTCCTGGGGTCAAGCAGGACTACGGCG
ACTTCACCGTCTCGCCTGGCAACTCCTACCTGATCTCCACGTTCTCCTGC
CCGGCTGGCCAGACTGTCAGCTACGAGATGAAGGAGGCTGGTAGCACCTA
CCTCAACTTCTTTGAGGACTACAACCCCTCTCCTCTCGGTCTGTACATCA
CGGTCTGCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008676-T1.utr5p1 | KJC3_008676-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008676-T1.utr3p1 | KJC3_008676-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018620 |
| DBxref | PFAM:PF09792 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2687915..2691122 + |
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