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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2700054..2701568+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008680-T1 ID=KJC3_008680-T1|Name=KJC3_008680-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1515bp|location=Sequence derived from alignment at ch6:2700054..2701568+ (Aspergillus niger KJC3)
GCGATGGATATATGAGAATAAGCGACTGCGCTTGCAGGCTTACTAATCAC
ATTGTGACGCTGTGTAGACAGCACCAGATACGAGTGTGTGCTCCGCGAAC
AACGAAAGGCAGTCCATGGGTTAAGGGTCAGCAGCAGTGTGCTTTGATGG
CTGTGCATTGCTGTGGTGTTGACTGTATGAAGGTGAGGGAAGGTGAGTGA
ACAAACGCTAGAATTGCTAACGCTTGGTAATAGGGTCTAGAAACTCCGGA
TGAAGTGTCATCCTTGATATCGCCCCGGTAAAATGTACTATGATAGTGAT
CTGCAAAGAAATATCCTTAAAGCCGGTCATGATAAAGTCCGGTTAAGTCC
AGGTAGTGAGTGCATTTTAACTCCGATTAAATCCAGGCCTTCAGATATAT
ATAACGGCAGTTAATTAATACCTTGCCCCTTCTTTTTTACTTCTCCAGAT
CATCTTACCAAAGTATCCAGGAACTTGGTTGTACACCCTCCAACGTATAA
CGTTCACCATGACTGTCATGAAACCATTAATCCTAATCACCGGTGCCAAC
CGGGGCTTAGGGTATGCCACGGCCAAACAGCTTACCAGAACCGGTAAATA
CCGTCTCCTCATTGGTGCCCGGACGCAAGAGAAAGCCGAGGAAGCCATTA
AGGAACTAAGCAGTTCCTCCGACGACCTGACGCCAGTGTCACTAGACCTT
AACAGTGACGAATCCATCAAGGCTGCTGCCACCTTTGTTCGGGAACGGTT
CGGTTCGCTCGATATCCTTGTCAATAATGGCGGAATCAACCGATCCTCTG
ACCCCAACGCCACGCTGCGCGAGACCTACCGCGCCGTGTTTGAGACTAAC
GTCTTCGGGGTGGCCGTCGTAATCGAGGCTTTCCTTCCCCTCCTCCGTGC
TTCCCAATATCCCGATCGACGCATTGTCAACGTTACTAGCGGCCTCGGAC
AGATTGGGATAGCCTACTCGCCTACCTCGGAGTATAGTGCCAGGGTCTGG
GAGCTGCCAGTCTACCGAAGCAGTAAATCCGCCCTCAACATGATGAATGC
GGTGGATGCGGTACGCCTGCAAAAGGAGAACATTCTGTCAGTCGTGGTCT
GCCCGGGCCACTGCCGGACGGACTTTGGAGGAGGCCGCGGTGTCAAGTCT
GCTGAAGAAGGGGCACGGCCTATTGTACGCGCGGCAACAGAGGGTTCCCC
GGACGAAATGTTTGGGAAGGTCGTGGAGGATGAGGGGTATTTTGTGGAGT
TTGGGTGGTAAATGCCACAATGATGGAGGAATTGGTCATTTGCAGTGTAT
TGTAACAGTCTTCGGGAATTGAACGAAAGCCACCACTCAACATTCATTAT
TGAAAATAAAGATCAAAATAGAACATACTTATACTAGTACCGTACTGCTA
GATCATAGTGATAACCTATATTCTGTAGTTGACGGTTGACTAGATGAAGA
TGATGGTGTAAAGATGATGGTGTAAAGATGATGGTGTAAAGATGATGGTG
TAAAGATGATGGTGT back to topCoding sequence (CDS) from alignment at ch6:2700054..2701568+ >KJC3_008680-T1 ID=KJC3_008680-T1|Name=KJC3_008680-T1|organism=Aspergillus niger KJC3|type=CDS|length=753bp|location=Sequence derived from alignment at ch6:2700054..2701568+ (Aspergillus niger KJC3)
ATGACTGTCATGAAACCATTAATCCTAATCACCGGTGCCAACCGGGGCTT
AGGGTATGCCACGGCCAAACAGCTTACCAGAACCGGTAAATACCGTCTCC
TCATTGGTGCCCGGACGCAAGAGAAAGCCGAGGAAGCCATTAAGGAACTA
AGCAGTTCCTCCGACGACCTGACGCCAGTGTCACTAGACCTTAACAGTGA
CGAATCCATCAAGGCTGCTGCCACCTTTGTTCGGGAACGGTTCGGTTCGC
TCGATATCCTTGTCAATAATGGCGGAATCAACCGATCCTCTGACCCCAAC
GCCACGCTGCGCGAGACCTACCGCGCCGTGTTTGAGACTAACGTCTTCGG
GGTGGCCGTCGTAATCGAGGCTTTCCTTCCCCTCCTCCGTGCTTCCCAAT
ATCCCGATCGACGCATTGTCAACGTTACTAGCGGCCTCGGACAGATTGGG
ATAGCCTACTCGCCTACCTCGGAGTATAGTGCCAGGGTCTGGGAGCTGCC
AGTCTACCGAAGCAGTAAATCCGCCCTCAACATGATGAATGCGGTGGATG
CGGTACGCCTGCAAAAGGAGAACATTCTGTCAGTCGTGGTCTGCCCGGGC
CACTGCCGGACGGACTTTGGAGGAGGCCGCGGTGTCAAGTCTGCTGAAGA
AGGGGCACGGCCTATTGTACGCGCGGCAACAGAGGGTTCCCCGGACGAAA
TGTTTGGGAAGGTCGTGGAGGATGAGGGGTATTTTGTGGAGTTTGGGTGG
TAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008680-T1.utr5p1 | KJC3_008680-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008680-T1.utr3p1 | KJC3_008680-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2700054..2701568 + |
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