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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2701756..2704505+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008681-T1 ID=KJC3_008681-T1|Name=KJC3_008681-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2750bp|location=Sequence derived from alignment at ch6:2701756..2704505+ (Aspergillus niger KJC3)
CTGCCATCCAATTCGATTCAATAGCGAGTAGCTTACATAAGCATACAATG
TGAAATTGACCGAAAGAGCGTTACAGGCCGTCTATGGGATCCACCCCCGA
TATTATTGTATCATAACAGCGGCCATACCGAGCCAAAGCTAACCGCCCGA
TTGTCGATCAAGCAGGGTCTGTTCACTAACACGGCCCATCATCTGTCAAT
GACACTCCGTGCCTAACTGCATTCCCGGCCCAGCTACTCGATGGTCAATG
ATATATTGCTATTCTAATGGCTATGGCCAGCCAGACTTTCCATTCGGGCT
ATGCTCTACGGGCAACAAGGTTTAATGGCCCATACCGGGCTCTTCCATTG
AAACGAGGCAGCCAGCGGTTGACCGAGCCGTGGTCGAGCCGATGTACTCT
GGGCGAGTGGGTCGGCGAAAGAGCTGCAGGCAACGAGTATTCAGACCTCC
CCCATATTTAGTCGCCCACAGCCCCATGCTTTGTCTCCGTTTCATTCTCA
TTGGCAGGTCACAAATCAGGGACTCAGCCTTCTCCGACTTCTTTCATTGC
TGTCCTTTCGCCGCTGGGCACATCTCAGTGGACACTTCAGCTGTCGACAG
ACACTCTCACGTGCTCTTATTTTCGCGCGCACACCGGTCGCATTAGGCTG
CTCTTTTTCAAGGAAAATAGATGCTTTGGAGCACCGGCCAGGTCTTTATA
TATCCGAGCTGTGAAGAAGGAGAATTCTGCCCCTCACTTATTGCATTTTG
TCTTAAACAAAGTGGATCCTGACCCGATGGACCGTCTACCCGATAAGTTG
CCTTTCTCAAAGCGGCGCCTGAAGCAGCGGGTCATTCTATCGTGAGAATC
GAACTCCAAGGAGAGGAATGCTACCTCATCGCTAATATGAGTCGTCCATG
GCAGATATATCTTTGACTATGTTATCCTTATGTTAGTTCTTCCTGTTGGC
GGATCATCGACGGCGTTTGCTAATAACCGCTGAAACAGTGCGTGCATTGG
AGGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCACTTTTCGT
TACGAAATATCTCAATTCAGTATCCTTATGCAGTCCACGAGCGTATAACC
ATTCAGGAAGCCCTCTGTATCTCCGGCCTGGCACCCCTCGTCATTATTAT
CGTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAAGACGCAGC
ATCCAGTCTCGGGGAAGAGAAAATTCACTGGTCCATATAGATGGAAGGAT
CGGTTGTGGGAGCTCAACTGTGGTATCTTGGGACTCTTGCTCTCACAAGG
GCTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGGAAAGCCCC
GGCCTGACTTCATTGATCGGTGTCAGCCTCGCGCAGGAAGTCAGGACGCG
ATACCCGGACTGTCGAACTCCACTATCTGTACTGGCGAACATGCACTTAT
CAAAGACGGCTTCCGATCATGGCCTTCAGGTAGGACAGCGCTTCAAAAGT
TCTGAACACGTTTCAAATGCTAATCCGTGGTGATAGGACATAGTAGCTGT
GAGAGACCCACCTACCTTTTCACAAACGCGCATTGAGAACTAATATAATC
ATTACAGCTTCATTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGG
CAAGCTGCACATAATGGACAACCGCGGCGAGGCCTGGAAGACACTCTTGG
TCATGATCCCGTCTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATG
GATGCAAGGCATCATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTAT
TATCTGCGCCTGCATCTCGTACCGTCAATATTTCCCTTCACTCAACGAGC
CTTGGAAGAAAGGACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCC
GTGGGGCCTGTCGAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGC
CGCTCTGAGGAACCCGGAGGAGGAGCGATTGAATGAAGCTCCTCAGTCGA
AGACGACCGGAAGTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAAT
CCATACACTACAAACATGTACGGCTACTCAAGACGTGACGAGGACGACAA
CTGGTCGTCCTCCAGCGAGGATGTTGCTGGTGGATATGAGATGCAACCTG
GCTATGCCCGGACACAGAACCCAGCATTGAACGGACCAACGGCGCGACTC
GATGTTGATACGGCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGC
CGCCACTACCCACGAAACACCGGGCGCGATTCCGACTCATGCGGACCGAG
GGCGTGACCTTACAGATATGCCGTACCGGGAAGTCTGAAACCCGAGTTTT
GGTTGATTGGTCAAGGGTGTATTTCTTGTCATTTCATAGATTTGTCACAT
TAAGAGGCTTGGATAGTGGATCTGGTATCATACCGAGAGGGCAGAATTCG
GCCACATTATTGGGATGTGGAAAAGGAGAGTCCGCAACGGCTTTTCTTCT
CCTTCCCCTTGCATCAGTTAAAAATAGTCCTAAGTACTTTCTTGGTCAAT
CCAGGACCCTGCCACACAAGAGGCAGAAAGCGTCCCTGAGGGCTAGACCG
GCGCTCAACCGTGGCTCGAGCACCTCGTGGGCCGGGCAGCCCCACCCACG
GGCCAGCTATGGCAACGGCACTCCCAAAGGCAAGGATGGCGGTAAACACC
GAACAATTATCACCAGTGACTGTATGCTCAATTGAAAGAATACTATACCC
back to topCoding sequence (CDS) from alignment at ch6:2701756..2704505+ >KJC3_008681-T1 ID=KJC3_008681-T1|Name=KJC3_008681-T1|organism=Aspergillus niger KJC3|type=CDS|length=6630bp|location=Sequence derived from alignment at ch6:2701756..2704505+ (Aspergillus niger KJC3)
ATGGACCGTCTACCCGATAAGTTGCCTTTCTCAAAGCGGCGCCTGAAGCA
GCGGGTCATTCTATCATATATCTTTGACTATGTTATCCTTATTGCGTGCA
TTGGAGGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCACTTT
TCGTTACGAAATATCTCAATTCAGTATCCTTATGCAGTCCACGAGCGTAT
AACCATTCAGGAAGCCCTCTGTATCTCCGGCCTGGCACCCCTCGTCATTA
TTATCGTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAAGACG
CAGCATCCAGTCTCGGGGAAGAGAAAATTCACTGGTCCATATAGATGGAA
GGATCGGTTGTGGGAGCTCAACTGTGGTATCTTGGGACTCTTGCTCTCAC
AAGGGCTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGGAAAG
CCCCGGCCTGACTTCATTGATCGGTGTCAGCCTCGCGCAGGAAGTCAGGA
CGCGATACCCGGACTGTCGAACTCCACTATCTGTACTGGCGAACATGCAC
TTATCAAAGACGGCTTCCGATCATGGCCTTCAGGACATAGTAGCTCTTCA
TTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGGCAAGCTGCACAT
AATGGACAACCGCGGCGAGGCCTGGAAGACACTCTTGGTCATGATCCCGT
CTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATGGATGCAAGGCAT
CATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTATTATCTGCGCCTG
CATCTCGTACCGTCAATATTTCCCTTCACTCAACGAGCCTTGGAAGAAAG
GACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCCGTGGGGCCTGTC
GAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGCCGCTCTGAGGAA
CCCGGAGGAGGAGCGATTGAATGAAGCTCCTCAGTCGAAGACGACCGGAA
GTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAATCCATACACTACA
AACATGTACGGCTACTCAAGACGTGACGAGGACGACAACTGGTCGTCCTC
CAGCGAGGATGTTGCTGGTGGATATGAGATGCAACCTGGCTATGCCCGGA
CACAGAACCCAGCATTGAACGGACCAACGGCGCGACTCGATGTTGATACG
GCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGCCGCCACTACCCA
CGAAACACCGGGCGCGATTCCGACTCATGCGGACCGAGGGCGTGACCTTA
CAGATATGCCGTACCGGGAAGTCTGAATGGACCGTCTACCCGATAAGTTG
CCTTTCTCAAAGCGGCGCCTGAAGCAGCGGGTCATTCTATCATATATCTT
TGACTATGTTATCCTTATTGCGTGCATTGGAGGCTTCTACGTCCTTGATT
CTATTGAACCATATCACCAGCACTTTTCGTTACGAAATATCTCAATTCAG
TATCCTTATGCAGTCCACGAGCGTATAACCATTCAGGAAGCCCTCTGTAT
CTCCGGCCTGGCACCCCTCGTCATTATTATCGTCTATACGCTATTCATCG
ACGGGCTTTTCTCGCACCACAAGACGCAGCATCCAGTCTCGGGGAAGAGA
AAATTCACTGGTCCATATAGATGGAAGGATCGGTTGTGGGAGCTCAACTG
TGGTATCTTGGGACTCTTGCTCTCACAAGGGCTGGCGTTTGTCATTACGC
AGGTGCTGAAAAATGCTTGTGGAAAGCCCCGGCCTGACTTCATTGATCGG
TGTCAGCCTCGCGCAGGAAGTCAGGACGCGATACCCGGACTGTCGAACTC
CACTATCTGTACTGGCGAACATGCACTTATCAAAGACGGCTTCCGATCAT
GGCCTTCAGGACATAGTAGCTCTTCATTTGCCGGATTATTCTATCTCACG
CTTTGGCTTAGTGGCAAGCTGCACATAATGGACAACCGCGGCGAGGCCTG
GAAGACACTCTTGGTCATGATCCCGTCTCTTGCAGCAACGCTTGTTGCGG
TGAGCCGTATTATGGATGCAAGGCATCATCCGTTCGATGTCATCACTGGA
TCGCTCCTAGGTATTATCTGCGCCTGCATCTCGTACCGTCAATATTTCCC
TTCACTCAACGAGCCTTGGAAGAAAGGACGCGCCTATCCCATCCGGACAT
GGGGCAGGGATCCCGTGGGGCCTGTCGAGACTGTCCGCCTGGTGGGTACT
GATGGAAGCACTGCCGCTCTGAGGAACCCGGAGGAGGAGCGATTGAATGA
AGCTCCTCAGTCGAAGACGACCGGAAGTGATGCTGGTAGGCCCTTGTACC
TACCGGAATCTAATCCATACACTACAAACATGTACGGCTACTCAAGACGT
GACGAGGACGACAACTGGTCGTCCTCCAGCGAGGATGTTGCTGGTGGATA
TGAGATGCAACCTGGCTATGCCCGGACACAGAACCCAGCATTGAACGGAC
CAACGGCGCGACTCGATGTTGATACGGCGTACCACTCCCAGACCCCTCAG
GTCGTACTTGGTGCCGCCACTACCCACGAAACACCGGGCGCGATTCCGAC
TCATGCGGACCGAGGGCGTGACCTTACAGATATGCCGTACCGGGAAGTCT
GAATGGACCGTCTACCCGATAAGTTGCCTTTCTCAAAGCGGCGCCTGAAG
CAGCGGGTCATTCTATCATATATCTTTGACTATGTTATCCTTATTGCGTG
CATTGGAGGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCACT
TTTCGTTACGAAATATCTCAATTCAGTATCCTTATGCAGTCCACGAGCGT
ATAACCATTCAGGAAGCCCTCTGTATCTCCGGCCTGGCACCCCTCGTCAT
TATTATCGTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAAGA
CGCAGCATCCAGTCTCGGGGAAGAGAAAATTCACTGGTCCATATAGATGG
AAGGATCGGTTGTGGGAGCTCAACTGTGGTATCTTGGGACTCTTGCTCTC
ACAAGGGCTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGGAA
AGCCCCGGCCTGACTTCATTGATCGGTGTCAGCCTCGCGCAGGAAGTCAG
GACGCGATACCCGGACTGTCGAACTCCACTATCTGTACTGGCGAACATGC
ACTTATCAAAGACGGCTTCCGATCATGGCCTTCAGGACATAGTAGCTCTT
CATTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGGCAAGCTGCAC
ATAATGGACAACCGCGGCGAGGCCTGGAAGACACTCTTGGTCATGATCCC
GTCTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATGGATGCAAGGC
ATCATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTATTATCTGCGCC
TGCATCTCGTACCGTCAATATTTCCCTTCACTCAACGAGCCTTGGAAGAA
AGGACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCCGTGGGGCCTG
TCGAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGCCGCTCTGAGG
AACCCGGAGGAGGAGCGATTGAATGAAGCTCCTCAGTCGAAGACGACCGG
AAGTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAATCCATACACTA
CAAACATGTACGGCTACTCAAGACGTGACGAGGACGACAACTGGTCGTCC
TCCAGCGAGGATGTTGCTGGTGGATATGAGATGCAACCTGGCTATGCCCG
GACACAGAACCCAGCATTGAACGGACCAACGGCGCGACTCGATGTTGATA
CGGCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGCCGCCACTACC
CACGAAACACCGGGCGCGATTCCGACTCATGCGGACCGAGGGCGTGACCT
TACAGATATGCCGTACCGGGAAGTCTGAATGGACCGTCTACCCGATAAGT
TGCCTTTCTCAAAGCGGCGCCTGAAGCAGCGGGTCATTCTATCATATATC
TTTGACTATGTTATCCTTATTGCGTGCATTGGAGGCTTCTACGTCCTTGA
TTCTATTGAACCATATCACCAGCACTTTTCGTTACGAAATATCTCAATTC
AGTATCCTTATGCAGTCCACGAGCGTATAACCATTCAGGAAGCCCTCTGT
ATCTCCGGCCTGGCACCCCTCGTCATTATTATCGTCTATACGCTATTCAT
CGACGGGCTTTTCTCGCACCACAAGACGCAGCATCCAGTCTCGGGGAAGA
GAAAATTCACTGGTCCATATAGATGGAAGGATCGGTTGTGGGAGCTCAAC
TGTGGTATCTTGGGACTCTTGCTCTCACAAGGGCTGGCGTTTGTCATTAC
GCAGGTGCTGAAAAATGCTTGTGGAAAGCCCCGGCCTGACTTCATTGATC
GGTGTCAGCCTCGCGCAGGAAGTCAGGACGCGATACCCGGACTGTCGAAC
TCCACTATCTGTACTGGCGAACATGCACTTATCAAAGACGGCTTCCGATC
ATGGCCTTCAGGACATAGTAGCTCTTCATTTGCCGGATTATTCTATCTCA
CGCTTTGGCTTAGTGGCAAGCTGCACATAATGGACAACCGCGGCGAGGCC
TGGAAGACACTCTTGGTCATGATCCCGTCTCTTGCAGCAACGCTTGTTGC
GGTGAGCCGTATTATGGATGCAAGGCATCATCCGTTCGATGTCATCACTG
GATCGCTCCTAGGTATTATCTGCGCCTGCATCTCGTACCGTCAATATTTC
CCTTCACTCAACGAGCCTTGGAAGAAAGGACGCGCCTATCCCATCCGGAC
ATGGGGCAGGGATCCCGTGGGGCCTGTCGAGACTGTCCGCCTGGTGGGTA
CTGATGGAAGCACTGCCGCTCTGAGGAACCCGGAGGAGGAGCGATTGAAT
GAAGCTCCTCAGTCGAAGACGACCGGAAGTGATGCTGGTAGGCCCTTGTA
CCTACCGGAATCTAATCCATACACTACAAACATGTACGGCTACTCAAGAC
GTGACGAGGACGACAACTGGTCGTCCTCCAGCGAGGATGTTGCTGGTGGA
TATGAGATGCAACCTGGCTATGCCCGGACACAGAACCCAGCATTGAACGG
ACCAACGGCGCGACTCGATGTTGATACGGCGTACCACTCCCAGACCCCTC
AGGTCGTACTTGGTGCCGCCACTACCCACGAAACACCGGGCGCGATTCCG
ACTCATGCGGACCGAGGGCGTGACCTTACAGATATGCCGTACCGGGAAGT
CTGAATGGACCGTCTACCCGATAAGTTGCCTTTCTCAAAGCGGCGCCTGA
AGCAGCGGGTCATTCTATCATATATCTTTGACTATGTTATCCTTATTGCG
TGCATTGGAGGCTTCTACGTCCTTGATTCTATTGAACCATATCACCAGCA
CTTTTCGTTACGAAATATCTCAATTCAGTATCCTTATGCAGTCCACGAGC
GTATAACCATTCAGGAAGCCCTCTGTATCTCCGGCCTGGCACCCCTCGTC
ATTATTATCGTCTATACGCTATTCATCGACGGGCTTTTCTCGCACCACAA
GACGCAGCATCCAGTCTCGGGGAAGAGAAAATTCACTGGTCCATATAGAT
GGAAGGATCGGTTGTGGGAGCTCAACTGTGGTATCTTGGGACTCTTGCTC
TCACAAGGGCTGGCGTTTGTCATTACGCAGGTGCTGAAAAATGCTTGTGG
AAAGCCCCGGCCTGACTTCATTGATCGGTGTCAGCCTCGCGCAGGAAGTC
AGGACGCGATACCCGGACTGTCGAACTCCACTATCTGTACTGGCGAACAT
GCACTTATCAAAGACGGCTTCCGATCATGGCCTTCAGGACATAGTAGCTC
TTCATTTGCCGGATTATTCTATCTCACGCTTTGGCTTAGTGGCAAGCTGC
ACATAATGGACAACCGCGGCGAGGCCTGGAAGACACTCTTGGTCATGATC
CCGTCTCTTGCAGCAACGCTTGTTGCGGTGAGCCGTATTATGGATGCAAG
GCATCATCCGTTCGATGTCATCACTGGATCGCTCCTAGGTATTATCTGCG
CCTGCATCTCGTACCGTCAATATTTCCCTTCACTCAACGAGCCTTGGAAG
AAAGGACGCGCCTATCCCATCCGGACATGGGGCAGGGATCCCGTGGGGCC
TGTCGAGACTGTCCGCCTGGTGGGTACTGATGGAAGCACTGCCGCTCTGA
GGAACCCGGAGGAGGAGCGATTGAATGAAGCTCCTCAGTCGAAGACGACC
GGAAGTGATGCTGGTAGGCCCTTGTACCTACCGGAATCTAATCCATACAC
TACAAACATGTACGGCTACTCAAGACGTGACGAGGACGACAACTGGTCGT
CCTCCAGCGAGGATGTTGCTGGTGGATATGAGATGCAACCTGGCTATGCC
CGGACACAGAACCCAGCATTGAACGGACCAACGGCGCGACTCGATGTTGA
TACGGCGTACCACTCCCAGACCCCTCAGGTCGTACTTGGTGCCGCCACTA
CCCACGAAACACCGGGCGCGATTCCGACTCATGCGGACCGAGGGCGTGAC
CTTACAGATATGCCGTACCGGGAAGTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008681-T1.utr5p1 | KJC3_008681-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008681-T1.utr3p1 | KJC3_008681-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036938 |
| DBxref | InterPro:IPR000326 |
| DBxref | PFAM:PF01569 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2701756..2704505 + |
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