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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2710792..2713848+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008685-T1 ID=KJC3_008685-T1|Name=KJC3_008685-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3057bp|location=Sequence derived from alignment at ch6:2710792..2713848+ (Aspergillus niger KJC3)
ACTGGTTACTTGCTGCTACTGTTGCTGCTAAACTAGTAGGACTTGTGGCT
GGTGCTTGTCCTCATCTCTTCGCTCTCTCTCTTCCGTCTTCCTCGCTTTC
TCTCCCCCTTCTTCTCGCGCGCTTTCTCCCTCCCTCTCTTCCCGGTCGCT
TTATATCTCCGCTCTTCCTCTTATCTTGGTCGCTGGATTGCTCCCGATCC
TTTCCCTTCTCCAACAGCGTCCCGTCCTTGCTCCCCCTTGTCGCGGACCA
TCCTTGTCACTACTCTTCTGACCCCGACCACACCAACTGCCATCATGGCG
GACTACAACTATGGAGGCTCTGAGGAGGAGAATGCGGAGTTGAAGAAGCT
CGAGACTGAGTTGGTATGATGCGATCCTATTCATTATCTCCTCGGTCGGC
GGGGAATGCTGCATCACATATGCTAACCCATACGTTGTCGTACAGCTCGA
TGACCCGGATAACTTCGAAACCTGGGAGAAACTGGTTCGCGCTGGCGAAG
CGCTCGAGGGCGGAATCAACCGCAACTCCAACCCCCAAGCCATCACCACC
GTGCGCAATGTTTACGACCGCTTCTTGGCCAAGTTCCCGCTGTTGTTCGG
TTACTGGAAGAAATATGCCGACCTGGAGTTTTCCATCACCGGCACTGAGG
CTGCGGACATGGTATGCATGGGCTTGGCCTGTTCAGATTTGACTGAAGTT
GATTGGATTGCTGATGCTTCTTTGACAGGTGTATGAACGCGGTGTCGCTA
GCATCTCGCCCTCGGTCGACCTGTGGACCAACTACTGCTCCTTCAAGGCC
GAGACCTCCCATGACGCTGATGTGATCCGAGAGTAAGTATAGTAGAGCTG
CTTTCCTTTCCCATCCCCCACGTAACCGTTACAAACGCAGCACGGACATG
GTTGTGATACCGGACCCGCGTGATGCAAATGTTCATTTGCACCAGTCCCC
TCGCTGACGGGTGAGATTTCACCTTACCCGGACTCTACTGGAGTTTACTT
CTCACCCATGGCTTCTCCAGGCTGTTTGCTCTCTCTCTACCCCCTTTGAA
GAAACATTTACAGTTGATTTCAAGCCAAGCACCTCCCCTGCACGGACACT
AAACACCAGGACTTGTGTTCGGGTGGCACCTATTCTGCGCTCGAAGCAGA
CGGGGGAACATAAGTTTCATCCACAGTTTGACCATCCTAGTCGTTCAATT
GTTTGGGCTCGCACTCATTGGGAATCTGACGCTCATGTTTGCTATCCTTG
TCACTCCCCTTCTTTCCCCCTCCACTCCCCCATCTCCCCAGCGTTGTTCT
GATGGTGGTGTACCCGCTCTGATACTGACGTTCTCCTGTTTGCAGGCTCT
TCGAGCGTGGCGCAACCAGCGTTGGGCTGGATTTCCTGGCCCACCCTTTC
TGGGACAAGTACATCGAGTTCGAGGAGCGCCTGGAGGCTTTTGATAAGAT
TTTTGCTATCCTGGGCCGGGTGATTCACATCCCCATGCATCAGTACGCTC
GGTATTTCGAGAGGTACAGGCAGTTGGCCCAGACTCGCCCTGTGGTGGAG
TTGGCGTCTCCGGAGACTTTGACCCAGTTCCGTGCGGAGCTTGATGCTGC
TGCCGGGCATGTGGCCCCCGGCGCGAAGGCAGAGGCAGAGGTTGAACGAG
ATCTGCGGTTACGCGTAGACAGCTACCATTTGGAGATCTTCTCCAAGACC
CAGACTGAGACCACGAAACGTTGGACATACGAGTCGGAGATCAAGCGCCC
GTACTTCCACGTTACCGAACTCGATGAGGGCCAGCTGAACAACTGGAAGA
AATACCTCGATTTCGAAGAATCTGAGGGCTCCTACTTGCGAACCCAATTC
TTGTACGAGAGATGCTTGGTGACGTGCGCTCACTACGATGAGTTCTGGCA
GCGTTACGCTAGGTGGATGGCCGGTCAACCTGGCAAGGAAGAAGAAGTGC
GCAATATCTACCAGCGCGCCAGCTGCCTGTACGTGCCGATCGCCAACCCA
GCCACCCGTCTTCAATATGCCTACTTCGAAGAGATGAGTGGCCGGGTGGA
TGTTGCCAAGGAGATCCACGACGCCATTCTCATCAACCTGCCCAACCACA
TCGAAACGATAGTGTCTCTGGCCAACATGTCTCGCCGTCACGGCGGACTC
GAGGCTGCCATCGAAGTGTACAAGAGCCAGTTGGATTCGCCACAGTCAGA
CTTGGCTACGAAGGCGGCACTGGTTGCAGAATGGGCTCGCCTGTTGTGGA
AGATCAAGGGCTCTGCCGAGGACGCCCGTCAGGTCTTCCAGACCAACCAG
CAGTACTACATGGACAGCCGGCCCTTCTGGACCAGCTACCTGAACTTCGA
GCTCGACCAGCCCACGAGCTCGTCTACAGAGAATGTCCAGTATGAGCGCA
TCAAGCAGGTCATCGAGGACATTCGGTCCAAGAGTACCCTTCCCGCCGAT
GTGGTGCGGGAGCTTGTTCAAATTTACATGGTCTACCTCCTTGAACGTGG
TACCAAGGATGCTGCAAAGGAGTACATGACCCTGGACCGCGAAGTGCACG
GACCGGCATCCGTGTCGAAGATGAAGGCCGCGGAAGCGGTGCAGCTGCCC
CCAGCTCAGCCGGTTCCTTCGGCGACGCCTGTGGCGGAAGTTGTGGTCCC
GACACCCCCACAAGCTAACCCTTATGCCTACTATCAGCAGACACCGGTCA
ACGGTGGCATGTAAGTCTGATGGCAAGTAAAGAAAGCTGCTGAATCCGGT
TGGTGCGGAAACGCCCAACCACAATCTAACTCCTCGCCAAGAGGACGGTA
CTCTTTCCGCTCATAGCTTGTGAAAGGCTTGCTGATATGTAGAACAATAA
TCTCTCTTCTGATGTGTGTGCAGCTTTCAGCGAATGGCGTGTTGAGCGAA
AGGCGAGACGGCATCTGCAGCGTGCAGAGAGCCGCTTCTCGACTGCTCTT
CCCGATATGATGGGATCCGGTTGGGTGGACCTTATGAGTTTGGACATTGT
CCTCGTGTATTCTAATGCGTAGGTAGCTTTCATTCTATACATGTGATTTC
AGTTACC back to topCoding sequence (CDS) from alignment at ch6:2710792..2713848+ >KJC3_008685-T1 ID=KJC3_008685-T1|Name=KJC3_008685-T1|organism=Aspergillus niger KJC3|type=CDS|length=7032bp|location=Sequence derived from alignment at ch6:2710792..2713848+ (Aspergillus niger KJC3)
ATGGCGGACTACAACTATGGAGGCTCTGAGGAGGAGAATGCGGAGTTGAA
GAAGCTCGAGACTGAGTTGCTCGATGACCCGGATAACTTCGAAACCTGGG
AGAAACTGGTTCGCGCTGGCGAAGCGCTCGAGGGCGGAATCAACCGCAAC
TCCAACCCCCAAGCCATCACCACCGTGCGCAATGTTTACGACCGCTTCTT
GGCCAAGTTCCCGCTGTTGTTCGGTTACTGGAAGAAATATGCCGACCTGG
AGTTTTCCATCACCGGCACTGAGGCTGCGGACATGGTGTATGAACGCGGT
GTCGCTAGCATCTCGCCCTCGGTCGACCTGTGGACCAACTACTGCTCCTT
CAAGGCCGAGACCTCCCATGACGCTGATGTGATCCGAGAGCTCTTCGAGC
GTGGCGCAACCAGCGTTGGGCTGGATTTCCTGGCCCACCCTTTCTGGGAC
AAGTACATCGAGTTCGAGGAGCGCCTGGAGGCTTTTGATAAGATTTTTGC
TATCCTGGGCCGGGTGATTCACATCCCCATGCATCAGTACGCTCGGTATT
TCGAGAGGTACAGGCAGTTGGCCCAGACTCGCCCTGTGGTGGAGTTGGCG
TCTCCGGAGACTTTGACCCAGTTCCGTGCGGAGCTTGATGCTGCTGCCGG
GCATGTGGCCCCCGGCGCGAAGGCAGAGGCAGAGGTTGAACGAGATCTGC
GGTTACGCGTAGACAGCTACCATTTGGAGATCTTCTCCAAGACCCAGACT
GAGACCACGAAACGTTGGACATACGAGTCGGAGATCAAGCGCCCGTACTT
CCACGTTACCGAACTCGATGAGGGCCAGCTGAACAACTGGAAGAAATACC
TCGATTTCGAAGAATCTGAGGGCTCCTACTTGCGAACCCAATTCTTGTAC
GAGAGATGCTTGGTGACGTGCGCTCACTACGATGAGTTCTGGCAGCGTTA
CGCTAGGTGGATGGCCGGTCAACCTGGCAAGGAAGAAGAAGTGCGCAATA
TCTACCAGCGCGCCAGCTGCCTGTACGTGCCGATCGCCAACCCAGCCACC
CGTCTTCAATATGCCTACTTCGAAGAGATGAGTGGCCGGGTGGATGTTGC
CAAGGAGATCCACGACGCCATTCTCATCAACCTGCCCAACCACATCGAAA
CGATAGTGTCTCTGGCCAACATGTCTCGCCGTCACGGCGGACTCGAGGCT
GCCATCGAAGTGTACAAGAGCCAGTTGGATTCGCCACAGTCAGACTTGGC
TACGAAGGCGGCACTGGTTGCAGAATGGGCTCGCCTGTTGTGGAAGATCA
AGGGCTCTGCCGAGGACGCCCGTCAGGTCTTCCAGACCAACCAGCAGTAC
TACATGGACAGCCGGCCCTTCTGGACCAGCTACCTGAACTTCGAGCTCGA
CCAGCCCACGAGCTCGTCTACAGAGAATGTCCAGTATGAGCGCATCAAGC
AGGTCATCGAGGACATTCGGTCCAAGAGTACCCTTCCCGCCGATGTGGTG
CGGGAGCTTGTTCAAATTTACATGGTCTACCTCCTTGAACGTGGTACCAA
GGATGCTGCAAAGGAGTACATGACCCTGGACCGCGAAGTGCACGGACCGG
CATCCGTGTCGAAGATGAAGGCCGCGGAAGCGGTGCAGCTGCCCCCAGCT
CAGCCGGTTCCTTCGGCGACGCCTGTGGCGGAAGTTGTGGTCCCGACACC
CCCACAAGCTAACCCTTATGCCTACTATCAGCAGACACCGGTCAACGGTG
GCATGTAAATGGCGGACTACAACTATGGAGGCTCTGAGGAGGAGAATGCG
GAGTTGAAGAAGCTCGAGACTGAGTTGCTCGATGACCCGGATAACTTCGA
AACCTGGGAGAAACTGGTTCGCGCTGGCGAAGCGCTCGAGGGCGGAATCA
ACCGCAACTCCAACCCCCAAGCCATCACCACCGTGCGCAATGTTTACGAC
CGCTTCTTGGCCAAGTTCCCGCTGTTGTTCGGTTACTGGAAGAAATATGC
CGACCTGGAGTTTTCCATCACCGGCACTGAGGCTGCGGACATGGTGTATG
AACGCGGTGTCGCTAGCATCTCGCCCTCGGTCGACCTGTGGACCAACTAC
TGCTCCTTCAAGGCCGAGACCTCCCATGACGCTGATGTGATCCGAGAGCT
CTTCGAGCGTGGCGCAACCAGCGTTGGGCTGGATTTCCTGGCCCACCCTT
TCTGGGACAAGTACATCGAGTTCGAGGAGCGCCTGGAGGCTTTTGATAAG
ATTTTTGCTATCCTGGGCCGGGTGATTCACATCCCCATGCATCAGTACGC
TCGGTATTTCGAGAGGTACAGGCAGTTGGCCCAGACTCGCCCTGTGGTGG
AGTTGGCGTCTCCGGAGACTTTGACCCAGTTCCGTGCGGAGCTTGATGCT
GCTGCCGGGCATGTGGCCCCCGGCGCGAAGGCAGAGGCAGAGGTTGAACG
AGATCTGCGGTTACGCGTAGACAGCTACCATTTGGAGATCTTCTCCAAGA
CCCAGACTGAGACCACGAAACGTTGGACATACGAGTCGGAGATCAAGCGC
CCGTACTTCCACGTTACCGAACTCGATGAGGGCCAGCTGAACAACTGGAA
GAAATACCTCGATTTCGAAGAATCTGAGGGCTCCTACTTGCGAACCCAAT
TCTTGTACGAGAGATGCTTGGTGACGTGCGCTCACTACGATGAGTTCTGG
CAGCGTTACGCTAGGTGGATGGCCGGTCAACCTGGCAAGGAAGAAGAAGT
GCGCAATATCTACCAGCGCGCCAGCTGCCTGTACGTGCCGATCGCCAACC
CAGCCACCCGTCTTCAATATGCCTACTTCGAAGAGATGAGTGGCCGGGTG
GATGTTGCCAAGGAGATCCACGACGCCATTCTCATCAACCTGCCCAACCA
CATCGAAACGATAGTGTCTCTGGCCAACATGTCTCGCCGTCACGGCGGAC
TCGAGGCTGCCATCGAAGTGTACAAGAGCCAGTTGGATTCGCCACAGTCA
GACTTGGCTACGAAGGCGGCACTGGTTGCAGAATGGGCTCGCCTGTTGTG
GAAGATCAAGGGCTCTGCCGAGGACGCCCGTCAGGTCTTCCAGACCAACC
AGCAGTACTACATGGACAGCCGGCCCTTCTGGACCAGCTACCTGAACTTC
GAGCTCGACCAGCCCACGAGCTCGTCTACAGAGAATGTCCAGTATGAGCG
CATCAAGCAGGTCATCGAGGACATTCGGTCCAAGAGTACCCTTCCCGCCG
ATGTGGTGCGGGAGCTTGTTCAAATTTACATGGTCTACCTCCTTGAACGT
GGTACCAAGGATGCTGCAAAGGAGTACATGACCCTGGACCGCGAAGTGCA
CGGACCGGCATCCGTGTCGAAGATGAAGGCCGCGGAAGCGGTGCAGCTGC
CCCCAGCTCAGCCGGTTCCTTCGGCGACGCCTGTGGCGGAAGTTGTGGTC
CCGACACCCCCACAAGCTAACCCTTATGCCTACTATCAGCAGACACCGGT
CAACGGTGGCATGTAAATGGCGGACTACAACTATGGAGGCTCTGAGGAGG
AGAATGCGGAGTTGAAGAAGCTCGAGACTGAGTTGCTCGATGACCCGGAT
AACTTCGAAACCTGGGAGAAACTGGTTCGCGCTGGCGAAGCGCTCGAGGG
CGGAATCAACCGCAACTCCAACCCCCAAGCCATCACCACCGTGCGCAATG
TTTACGACCGCTTCTTGGCCAAGTTCCCGCTGTTGTTCGGTTACTGGAAG
AAATATGCCGACCTGGAGTTTTCCATCACCGGCACTGAGGCTGCGGACAT
GGTGTATGAACGCGGTGTCGCTAGCATCTCGCCCTCGGTCGACCTGTGGA
CCAACTACTGCTCCTTCAAGGCCGAGACCTCCCATGACGCTGATGTGATC
CGAGAGCTCTTCGAGCGTGGCGCAACCAGCGTTGGGCTGGATTTCCTGGC
CCACCCTTTCTGGGACAAGTACATCGAGTTCGAGGAGCGCCTGGAGGCTT
TTGATAAGATTTTTGCTATCCTGGGCCGGGTGATTCACATCCCCATGCAT
CAGTACGCTCGGTATTTCGAGAGGTACAGGCAGTTGGCCCAGACTCGCCC
TGTGGTGGAGTTGGCGTCTCCGGAGACTTTGACCCAGTTCCGTGCGGAGC
TTGATGCTGCTGCCGGGCATGTGGCCCCCGGCGCGAAGGCAGAGGCAGAG
GTTGAACGAGATCTGCGGTTACGCGTAGACAGCTACCATTTGGAGATCTT
CTCCAAGACCCAGACTGAGACCACGAAACGTTGGACATACGAGTCGGAGA
TCAAGCGCCCGTACTTCCACGTTACCGAACTCGATGAGGGCCAGCTGAAC
AACTGGAAGAAATACCTCGATTTCGAAGAATCTGAGGGCTCCTACTTGCG
AACCCAATTCTTGTACGAGAGATGCTTGGTGACGTGCGCTCACTACGATG
AGTTCTGGCAGCGTTACGCTAGGTGGATGGCCGGTCAACCTGGCAAGGAA
GAAGAAGTGCGCAATATCTACCAGCGCGCCAGCTGCCTGTACGTGCCGAT
CGCCAACCCAGCCACCCGTCTTCAATATGCCTACTTCGAAGAGATGAGTG
GCCGGGTGGATGTTGCCAAGGAGATCCACGACGCCATTCTCATCAACCTG
CCCAACCACATCGAAACGATAGTGTCTCTGGCCAACATGTCTCGCCGTCA
CGGCGGACTCGAGGCTGCCATCGAAGTGTACAAGAGCCAGTTGGATTCGC
CACAGTCAGACTTGGCTACGAAGGCGGCACTGGTTGCAGAATGGGCTCGC
CTGTTGTGGAAGATCAAGGGCTCTGCCGAGGACGCCCGTCAGGTCTTCCA
GACCAACCAGCAGTACTACATGGACAGCCGGCCCTTCTGGACCAGCTACC
TGAACTTCGAGCTCGACCAGCCCACGAGCTCGTCTACAGAGAATGTCCAG
TATGAGCGCATCAAGCAGGTCATCGAGGACATTCGGTCCAAGAGTACCCT
TCCCGCCGATGTGGTGCGGGAGCTTGTTCAAATTTACATGGTCTACCTCC
TTGAACGTGGTACCAAGGATGCTGCAAAGGAGTACATGACCCTGGACCGC
GAAGTGCACGGACCGGCATCCGTGTCGAAGATGAAGGCCGCGGAAGCGGT
GCAGCTGCCCCCAGCTCAGCCGGTTCCTTCGGCGACGCCTGTGGCGGAAG
TTGTGGTCCCGACACCCCCACAAGCTAACCCTTATGCCTACTATCAGCAG
ACACCGGTCAACGGTGGCATGTAAATGGCGGACTACAACTATGGAGGCTC
TGAGGAGGAGAATGCGGAGTTGAAGAAGCTCGAGACTGAGTTGCTCGATG
ACCCGGATAACTTCGAAACCTGGGAGAAACTGGTTCGCGCTGGCGAAGCG
CTCGAGGGCGGAATCAACCGCAACTCCAACCCCCAAGCCATCACCACCGT
GCGCAATGTTTACGACCGCTTCTTGGCCAAGTTCCCGCTGTTGTTCGGTT
ACTGGAAGAAATATGCCGACCTGGAGTTTTCCATCACCGGCACTGAGGCT
GCGGACATGGTGTATGAACGCGGTGTCGCTAGCATCTCGCCCTCGGTCGA
CCTGTGGACCAACTACTGCTCCTTCAAGGCCGAGACCTCCCATGACGCTG
ATGTGATCCGAGAGCTCTTCGAGCGTGGCGCAACCAGCGTTGGGCTGGAT
TTCCTGGCCCACCCTTTCTGGGACAAGTACATCGAGTTCGAGGAGCGCCT
GGAGGCTTTTGATAAGATTTTTGCTATCCTGGGCCGGGTGATTCACATCC
CCATGCATCAGTACGCTCGGTATTTCGAGAGGTACAGGCAGTTGGCCCAG
ACTCGCCCTGTGGTGGAGTTGGCGTCTCCGGAGACTTTGACCCAGTTCCG
TGCGGAGCTTGATGCTGCTGCCGGGCATGTGGCCCCCGGCGCGAAGGCAG
AGGCAGAGGTTGAACGAGATCTGCGGTTACGCGTAGACAGCTACCATTTG
GAGATCTTCTCCAAGACCCAGACTGAGACCACGAAACGTTGGACATACGA
GTCGGAGATCAAGCGCCCGTACTTCCACGTTACCGAACTCGATGAGGGCC
AGCTGAACAACTGGAAGAAATACCTCGATTTCGAAGAATCTGAGGGCTCC
TACTTGCGAACCCAATTCTTGTACGAGAGATGCTTGGTGACGTGCGCTCA
CTACGATGAGTTCTGGCAGCGTTACGCTAGGTGGATGGCCGGTCAACCTG
GCAAGGAAGAAGAAGTGCGCAATATCTACCAGCGCGCCAGCTGCCTGTAC
GTGCCGATCGCCAACCCAGCCACCCGTCTTCAATATGCCTACTTCGAAGA
GATGAGTGGCCGGGTGGATGTTGCCAAGGAGATCCACGACGCCATTCTCA
TCAACCTGCCCAACCACATCGAAACGATAGTGTCTCTGGCCAACATGTCT
CGCCGTCACGGCGGACTCGAGGCTGCCATCGAAGTGTACAAGAGCCAGTT
GGATTCGCCACAGTCAGACTTGGCTACGAAGGCGGCACTGGTTGCAGAAT
GGGCTCGCCTGTTGTGGAAGATCAAGGGCTCTGCCGAGGACGCCCGTCAG
GTCTTCCAGACCAACCAGCAGTACTACATGGACAGCCGGCCCTTCTGGAC
CAGCTACCTGAACTTCGAGCTCGACCAGCCCACGAGCTCGTCTACAGAGA
ATGTCCAGTATGAGCGCATCAAGCAGGTCATCGAGGACATTCGGTCCAAG
AGTACCCTTCCCGCCGATGTGGTGCGGGAGCTTGTTCAAATTTACATGGT
CTACCTCCTTGAACGTGGTACCAAGGATGCTGCAAAGGAGTACATGACCC
TGGACCGCGAAGTGCACGGACCGGCATCCGTGTCGAAGATGAAGGCCGCG
GAAGCGGTGCAGCTGCCCCCAGCTCAGCCGGTTCCTTCGGCGACGCCTGT
GGCGGAAGTTGTGGTCCCGACACCCCCACAAGCTAACCCTTATGCCTACT
ATCAGCAGACACCGGTCAACGGTGGCATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008685-T1.utr5p1 | KJC3_008685-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008685-T1.utr3p1 | KJC3_008685-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR003107 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2710792..2713848 + |
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