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KJC3_008685-T2, KJC3_008685-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008685-T2
Unique NameKJC3_008685-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2710792..2713848+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008685-T2 ID=KJC3_008685-T2|Name=KJC3_008685-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3057bp|location=Sequence derived from alignment at ch6:2710792..2713848+ (Aspergillus niger KJC3)
ACTGGTTACTTGCTGCTACTGTTGCTGCTAAACTAGTAGGACTTGTGGCT
GGTGCTTGTCCTCATCTCTTCGCTCTCTCTCTTCCGTCTTCCTCGCTTTC
TCTCCCCCTTCTTCTCGCGCGCTTTCTCCCTCCCTCTCTTCCCGGTCGCT
TTATATCTCCGCTCTTCCTCTTATCTTGGTCGCTGGATTGCTCCCGATCC
TTTCCCTTCTCCAACAGCGTCCCGTCCTTGCTCCCCCTTGTCGCGGACCA
TCCTTGTCACTACTCTTCTGACCCCGACCACACCAACTGCCATCATGGCG
GACTACAACTATGGAGGCTCTGAGGAGGAGAATGCGGAGTTGAAGAAGCT
CGAGACTGAGTTGGTATGATGCGATCCTATTCATTATCTCCTCGGTCGGC
GGGGAATGCTGCATCACATATGCTAACCCATACGTTGTCGTACAGCTCGA
TGACCCGGATAACTTCGAAACCTGGGAGAAACTGGTTCGCGCTGGCGAAG
CGCTCGAGGGCGGAATCAACCGCAACTCCAACCCCCAAGCCATCACCACC
GTGCGCAATGTTTACGACCGCTTCTTGGCCAAGTTCCCGCTGTTGTTCGG
TTACTGGAAGAAATATGCCGACCTGGAGTTTTCCATCACCGGCACTGAGG
CTGCGGACATGGTATGCATGGGCTTGGCCTGTTCAGATTTGACTGAAGTT
GATTGGATTGCTGATGCTTCTTTGACAGGTGTATGAACGCGGTGTCGCTA
GCATCTCGCCCTCGGTCGACCTGTGGACCAACTACTGCTCCTTCAAGGCC
GAGACCTCCCATGACGCTGATGTGATCCGAGAGTAAGTATAGTAGAGCTG
CTTTCCTTTCCCATCCCCCACGTAACCGTTACAAACGCAGCACGGACATG
GTTGTGATACCGGACCCGCGTGATGCAAATGTTCATTTGCACCAGTCCCC
TCGCTGACGGGTGAGATTTCACCTTACCCGGACTCTACTGGAGTTTACTT
CTCACCCATGGCTTCTCCAGGCTGTTTGCTCTCTCTCTACCCCCTTTGAA
GAAACATTTACAGTTGATTTCAAGCCAAGCACCTCCCCTGCACGGACACT
AAACACCAGGACTTGTGTTCGGGTGGCACCTATTCTGCGCTCGAAGCAGA
CGGGGGAACATAAGTTTCATCCACAGTTTGACCATCCTAGTCGTTCAATT
GTTTGGGCTCGCACTCATTGGGAATCTGACGCTCATGTTTGCTATCCTTG
TCACTCCCCTTCTTTCCCCCTCCACTCCCCCATCTCCCCAGCGTTGTTCT
GATGGTGGTGTACCCGCTCTGATACTGACGTTCTCCTGTTTGCAGGCTCT
TCGAGCGTGGCGCAACCAGCGTTGGGCTGGATTTCCTGGCCCACCCTTTC
TGGGACAAGTACATCGAGTTCGAGGAGCGCCTGGAGGCTTTTGATAAGAT
TTTTGCTATCCTGGGCCGGGTGATTCACATCCCCATGCATCAGTACGCTC
GGTATTTCGAGAGGTACAGGCAGTTGGCCCAGACTCGCCCTGTGGTGGAG
TTGGCGTCTCCGGAGACTTTGACCCAGTTCCGTGCGGAGCTTGATGCTGC
TGCCGGGCATGTGGCCCCCGGCGCGAAGGCAGAGGCAGAGGTTGAACGAG
ATCTGCGGTTACGCGTAGACAGCTACCATTTGGAGATCTTCTCCAAGACC
CAGACTGAGACCACGAAACGTTGGACATACGAGTCGGAGATCAAGCGCCC
GTACTTCCACGTTACCGAACTCGATGAGGGCCAGCTGAACAACTGGAAGA
AATACCTCGATTTCGAAGAATCTGAGGGCTCCTACTTGCGAACCCAATTC
TTGTACGAGAGATGCTTGGTGACGTGCGCTCACTACGATGAGTTCTGGCA
GCGTTACGCTAGGTGGATGGCCGGTCAACCTGGCAAGGAAGAAGAAGTGC
GCAATATCTACCAGCGCGCCAGCTGCCTGTACGTGCCGATCGCCAACCCA
GCCACCCGTCTTCAATATGCCTACTTCGAAGAGATGAGTGGCCGGGTGGA
TGTTGCCAAGGAGATCCACGACGCCATTCTCATCAACCTGCCCAACCACA
TCGAAACGATAGTGTCTCTGGCCAACATGTCTCGCCGTCACGGCGGACTC
GAGGCTGCCATCGAAGTGTACAAGAGCCAGTTGGATTCGCCACAGTCAGA
CTTGGCTACGAAGGCGGCACTGGTTGCAGAATGGGCTCGCCTGTTGTGGA
AGATCAAGGGCTCTGCCGAGGACGCCCGTCAGGTCTTCCAGACCAACCAG
CAGTACTACATGGACAGCCGGCCCTTCTGGACCAGCTACCTGAACTTCGA
GCTCGACCAGCCCACGAGCTCGTCTACAGAGAATGTCCAGTATGAGCGCA
TCAAGCAGGTCATCGAGGACATTCGGTCCAAGAGTACCCTTCCCGCCGAT
GTGGTGCGGGAGCTTGTTCAAATTTACATGGTCTACCTCCTTGAACGTGG
TACCAAGGATGCTGCAAAGGAGTACATGACCCTGGACCGCGAAGTGCACG
GACCGGCATCCGTGTCGAAGATGAAGGCCGCGGAAGCGGTGCAGCTGCCC
CCAGCTCAGCCGGTTCCTTCGGCGACGCCTGTGGCGGAAGTTGTGGTCCC
GACACCCCCACAAGCTAACCCTTATGCCTACTATCAGCAGACACCGGTCA
ACGGTGGCATGTAAGTCTGATGGCAAGTAAAGAAAGCTGCTGAATCCGGT
TGGTGCGGAAACGCCCAACCACAATCTAACTCCTCGCCAAGAGGACGGTA
CTCTTTCCGCTCATAGCTTGTGAAAGGCTTGCTGATATGTAGAACAATAA
TCTCTCTTCTGATGTGTGTGCAGCTTTCAGCGAATGGCGTGTTGAGCGAA
AGGCGAGACGGCATCTGCAGCGTGCAGAGAGCCGCTTCTCGACTGCTCTT
CCCGATATGATGGGATCCGGTTGGGTGGACCTTATGAGTTTGGACATTGT
CCTCGTGTATTCTAATGCGTAGGTAGCTTTCATTCTATACATGTGATTTC
AGTTACC
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Coding sequence (CDS) from alignment at ch6:2710792..2713848+

>KJC3_008685-T2 ID=KJC3_008685-T2|Name=KJC3_008685-T2|organism=Aspergillus niger KJC3|type=CDS|length=2742bp|location=Sequence derived from alignment at ch6:2710792..2713848+ (Aspergillus niger KJC3)
ATGCTCTTCGAGCGTGGCGCAACCAGCGTTGGGCTGGATTTCCTGGCCCA
CCCTTTCTGGGACAAGTACATCGAGTTCGAGGAGCGCCTGGAGGCTTTTG
ATAAGATTTTTGCTATCCTGGGCCGGGTGATTCACATCCCCATGCATCAG
TACGCTCGGTATTTCGAGAGGTACAGGCAGTTGGCCCAGACTCGCCCTGT
GGTGGAGTTGGCGTCTCCGGAGACTTTGACCCAGTTCCGTGCGGAGCTTG
ATGCTGCTGCCGGGCATGTGGCCCCCGGCGCGAAGGCAGAGGCAGAGGTT
GAACGAGATCTGCGGTTACGCGTAGACAGCTACCATTTGGAGATCTTCTC
CAAGACCCAGACTGAGACCACGAAACGTTGGACATACGAGTCGGAGATCA
AGCGCCCGTACTTCCACGTTACCGAACTCGATGAGGGCCAGCTGAACAAC
TGGAAGAAATACCTCGATTTCGAAGAATCTGAGGGCTCCTACTTGCGAAC
CCAATTCTTGTACGAGAGATGCTTGGTGACGTGCGCTCACTACGATGAGT
TCTGGCAGCGTTACGCTAGGTGGATGGCCGGTCAACCTGGCAAGGAAGAA
GAAGTGCGCAATATCTACCAGCGCGCCAGCTGCCTGTACGTGCCGATCGC
CAACCCAGCCACCCGTCTTCAATATGCCTACTTCGAAGAGATGAGTGGCC
GGGTGGATGTTGCCAAGGAGATCCACGACGCCATTCTCATCAACCTGCCC
AACCACATCGAAACGATAGTGTCTCTGGCCAACATGTCTCGCCGTCACGG
CGGACTCGAGGCTGCCATCGAAGTGTACAAGAGCCAGTTGGATTCGCCAC
AGTCAGACTTGGCTACGAAGGCGGCACTGGTTGCAGAATGGGCTCGCCTG
TTGTGGAAGATCAAGGGCTCTGCCGAGGACGCCCGTCAGGTCTTCCAGAC
CAACCAGCAGTACTACATGGACAGCCGGCCCTTCTGGACCAGCTACCTGA
ACTTCGAGCTCGACCAGCCCACGAGCTCGTCTACAGAGAATGTCCAGTAT
GAGCGCATCAAGCAGGTCATCGAGGACATTCGGTCCAAGAGTACCCTTCC
CGCCGATGTGGTGCGGGAGCTTGTTCAAATTTACATGGTCTACCTCCTTG
AACGTGGTACCAAGGATGCTGCAAAGGAGTACATGACCCTGGACCGCGAA
GTGCACGGACCGGCATCCGTGTCGAAGATGAAGGCCGCGGAAGCGGTGCA
GCTGCCCCCAGCTCAGCCGGTTCCTTCGGCGACGCCTGTGGCGGAAGTTG
TGGTCCCGACACCCCCACAAGCTAACCCTTATGCCTACTATCAGCAGACA
CCGGTCAACGGTGGCATGTAAATGCTCTTCGAGCGTGGCGCAACCAGCGT
TGGGCTGGATTTCCTGGCCCACCCTTTCTGGGACAAGTACATCGAGTTCG
AGGAGCGCCTGGAGGCTTTTGATAAGATTTTTGCTATCCTGGGCCGGGTG
ATTCACATCCCCATGCATCAGTACGCTCGGTATTTCGAGAGGTACAGGCA
GTTGGCCCAGACTCGCCCTGTGGTGGAGTTGGCGTCTCCGGAGACTTTGA
CCCAGTTCCGTGCGGAGCTTGATGCTGCTGCCGGGCATGTGGCCCCCGGC
GCGAAGGCAGAGGCAGAGGTTGAACGAGATCTGCGGTTACGCGTAGACAG
CTACCATTTGGAGATCTTCTCCAAGACCCAGACTGAGACCACGAAACGTT
GGACATACGAGTCGGAGATCAAGCGCCCGTACTTCCACGTTACCGAACTC
GATGAGGGCCAGCTGAACAACTGGAAGAAATACCTCGATTTCGAAGAATC
TGAGGGCTCCTACTTGCGAACCCAATTCTTGTACGAGAGATGCTTGGTGA
CGTGCGCTCACTACGATGAGTTCTGGCAGCGTTACGCTAGGTGGATGGCC
GGTCAACCTGGCAAGGAAGAAGAAGTGCGCAATATCTACCAGCGCGCCAG
CTGCCTGTACGTGCCGATCGCCAACCCAGCCACCCGTCTTCAATATGCCT
ACTTCGAAGAGATGAGTGGCCGGGTGGATGTTGCCAAGGAGATCCACGAC
GCCATTCTCATCAACCTGCCCAACCACATCGAAACGATAGTGTCTCTGGC
CAACATGTCTCGCCGTCACGGCGGACTCGAGGCTGCCATCGAAGTGTACA
AGAGCCAGTTGGATTCGCCACAGTCAGACTTGGCTACGAAGGCGGCACTG
GTTGCAGAATGGGCTCGCCTGTTGTGGAAGATCAAGGGCTCTGCCGAGGA
CGCCCGTCAGGTCTTCCAGACCAACCAGCAGTACTACATGGACAGCCGGC
CCTTCTGGACCAGCTACCTGAACTTCGAGCTCGACCAGCCCACGAGCTCG
TCTACAGAGAATGTCCAGTATGAGCGCATCAAGCAGGTCATCGAGGACAT
TCGGTCCAAGAGTACCCTTCCCGCCGATGTGGTGCGGGAGCTTGTTCAAA
TTTACATGGTCTACCTCCTTGAACGTGGTACCAAGGATGCTGCAAAGGAG
TACATGACCCTGGACCGCGAAGTGCACGGACCGGCATCCGTGTCGAAGAT
GAAGGCCGCGGAAGCGGTGCAGCTGCCCCCAGCTCAGCCGGTTCCTTCGG
CGACGCCTGTGGCGGAAGTTGTGGTCCCGACACCCCCACAAGCTAACCCT
TATGCCTACTATCAGCAGACACCGGTCAACGGTGGCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008685KJC3_008685Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008685-T2KJC3_008685-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008685-T2.utr5p1KJC3_008685-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008685-T2.utr5p2KJC3_008685-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008685-T2.utr5p3KJC3_008685-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008685-T2.exon1KJC3_008685-T2.exon1Aspergillus niger KJC3exon
KJC3_008685-T2.exon2KJC3_008685-T2.exon2Aspergillus niger KJC3exon
KJC3_008685-T2.exon3KJC3_008685-T2.exon3Aspergillus niger KJC3exon
KJC3_008685-T2.exon4KJC3_008685-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008685-T2.cdsKJC3_008685-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008685-T2.utr3p1KJC3_008685-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR003107
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2710792..2713848 +
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