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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2736227..2739988- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008692-T1 ID=KJC3_008692-T1|Name=KJC3_008692-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3762bp|location=Sequence derived from alignment at ch6:2736227..2739988- (Aspergillus niger KJC3) GCTGGCACCACCACCAGCGAAAGTAAAGTTCCATGCAGCCCATCTCGCCC
AAAAAGGCTTTCAGACTAAAAAGTACGGCTCCAGTCCTACTGCTCACTAC
TCACGGCGCTACCAGCTCGTAGCACAAGCAGATCAGTCGCTCTTTTATCC
ACTGCCCATCCTTCTGGCCGGCTTTCCTCTTTCCATATCGGCCCTGTCTC
TCATTTTCCCCGCGACTGTCCTCTTCTTTCAAATTAATCTTCTTTATTTC
TTATTTTTTCCTTTTTTGCCCTTTTTAGACTTGTCTCGATCCTCATCTGG
TCTTTCCTTTTCTCTTCCCTCTCTCTTTTATCTCTCTCTCTTAATCTTAA
TTGTCTGCCCTCTTTTTCTCTCTTTCACTTTTGCGACTCTATACAGTCTC
TCCCGGTTTCCTTGAATCGAGAACGTCCTGAACCATATTCATCCTTTTTG
GTTTGGCTCGTTTCGACACACAAGGTGCCTGTCCTTCCTTCATAGACTTG
CGGCATAGTCGTCAGATATAATCCCAGATACCACCACCCCCATTCAACCT
TTCTACCAAGAACGATACAGTCGTTTGTCACAGCATACCAGTCAATCGAT
TAATCAATCAATCAATCTCGCTTCTCATATATACTCTACTGGTTGAGAGC
GGTCCCTGGATTATCATCTGTCCTTCCCCCAGTCATTCTCTCACACTCAA
AGTGCAAGCGACTCTGCAAGACATTCATTCACCCCCAGCGCTCATCGCTG
TGGACGAGCTACCAACTATATAACTAATAATATCCACTAAAGAGTAGAGC
TATCTCTACTCTTGTATTCACAACGTCCTACCATCTGTGAGTTCACTTCT
TCCTATTCATGGCGCAATGCGAGTGACTGACCGGGTTACCGTTCTTTATC
TCTCTAGACACAATGGACGGAACATACACCATGGCACCTACTTCGGTGCA
AGGTCAACCATCATTTGCATACTACGCTGATTCGCAGCAAAGACAACATT
TCACCAGCCACCCCTCAGATATGCAGTCATACTATGGCCAAGTGCAGGCC
TTCCAGCAACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTACAC
TGCCCCTCTCATGAACATGCACCAGATGGCTACCACCAATGCCTTCCGTG
GTGCCATGAACATGACTCCCATTGCCTCTCCTCAGCCGTCACACCTCAAG
CCCACAATTGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGACAC
GAGGTTCGTCGGTAACGACTACTACGCATTCCCCTCCACCCCACCACTCT
CCACAGCTGGAAGCTCTATCAGCAGCCCGCCTTCTACCAGCGGCACCCTT
CACACCCCGATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGGTGT
CAAGGAGGGATGCGAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTG
ACTGGGCCCGGTCTGACTCGCCGCCTCTTACACCTGGTAAGTCATTATCT
AACCCGATGTCCCTTTTTTACATGGTTGCAAGATAGGCTGCAGGGAGTGG
GTGCAGCCAACGGAAAAGGCACGGGGCCGGGCATCTAGGGTTGTACAGGG
AGACTAACTCGACTTGTTCTAGTGTTCATCCATCCGCCTTCCCTCACCGC
CAGCCAAACATCCGAGCTTCTGTCAGCGCACAGCTCTTGCCCATCCCTTT
CCCCATCGCCATCTCCCGTGGTCCCCACATTCGTTGCCCAGCCTCAAGGT
CTGCCGACCGAGCAGTCCAGCTCCGACTTCTGTGACCCCCGTCAGCTGAC
GGTTGAGTCCTCCATCAATGCCACCCCTGCTGAGCTGCCGCCTCTGCCCA
CGCTCTCCTGCGATGACGAGGAGCCTCGGGTGGTTCTGGGCAGCGAGGCC
GTGACCCTTCCTGTCCATGAGACCCTCTCTCCCGCCTTCACCTGCTCCTC
TTCGGAGGACCCTCTCAGCAGCCTGCCGACCTTTGACAGCTTCTCGGACC
TGGACTCGGAAGACGAATTCGTCAACCGCCTGGTCGACTTCCCCCCTAGT
GGCAATGCCTACTACTTGGGTGAGAAGAGGCAGCGCGTGGGAACGACATA
CCCCCTTGAGGAAGAGGAATTCTTCAGTGAGCAGAGCTTCGACGAGTCTG
ACGAGCAAGATCTCTCTCAGTCCAGTCTCCCTTACCTGGGAAGCCACGAC
TTCACTGGCGTCCAGACGAACATCAATGAAGCTTCGGAAGAGATGGGCAA
CAAGAAGAGGAACAACCGCAAGTCGCTGAAGCGGGCTAGTACCTCGGACA
GCGAAACGGATTCGATTAGCAAGAAGTCGCAGCCTTCGATCAACAGCCGT
GCCACCAGCACTGAGACAAACGCCTCGACACCCCAGACTGTCCAGGCCCG
CCACAACTCCGATGCGCATTCGTCGTGCGCTTCTGAGGCTCCTGCTGCCC
CCGTCTCGGTCAACCGACGCGGTCGTAAGCAGTCCCTGACGGATGACCCC
TCCAAGACCTTCGTGTGCACCCTCTGCTCCCGTCGCTTCCGTCGCCAAGA
GCACCTCAAGCGTCACTACCGCTCTCTCCACACTCAGGACAAGCCTTTCG
AGTGCAATGAGTGCGGTAAGAAGTTCTCGCGGAGCGATAACCTTGCGCAG
CACGCTCGCACTCATGCGGGTGGCTCTGTCGTGATGGGCGTCATCGACAC
CGGCAATGCGACCCCGCCAACCCCCTATGAAGAACGAGACCCCAGTACGC
TGGGAAATGTTCTCTACGAGGCCGCCAACGCCGCCGCTACCAAGTCCACA
ACCAGTGAGTCGGATGAGAGTTCCTCTGACTCGCCGGTTGCCGACCGACG
GGCGCCCAAGAAGCGCAAGCGCGACAGCGATGCCTAGAGCGGCATCTGCT
TGGCTTGCAGCTATCACGATGATATGTGACCAGGAGCTCCCATATATCAC
TTAATAACATCCTATACATAACCTTCCATTCCACTGGTTGGTCTGACTTG
GTCTTGCGGTTTGGCGTCCGGGCTTTGTTTCTGGCGGTGACAAGAATAGG
AATTACAGGTGTACGGGTTTTGACCGGTTCTGGTGCCCTACTCAAAAAAA
GGAAAACAAAAACGACAAACGATAACAAACCATGAGCAAAGGGCACCCTT
TATGGGACCGAATATTGGCGAAGCATTAGACCGGCGGCAACGGAACTTGG
GCGCACTTGGAGTCCACGGTTGGACCAAAACTAATAGAGCGCATGATGAC
TTTCACATTTGAGGCACTGGTGATCTGGGTTGATCTTTTCTCCGATTCCC
CTTTCTACTCCTTTTTATCTTTCTTTTCACAACCTGTTTGCAGCGAGAGA
ATATCTCCGACTCAATCCTCGTGCGACGGGGGCTATTGACCCCCTGTCGG
CGATTTTCTGTGTACCCGATCTCCCACCTCTTTTCCTTACCAGCTTCTTC
TATATACTTCATTCTTCTTTTTTTGTTGCCTTCAGTTGCATTCATTGTGC
CTATTCGATGTAATATTTTTGCACACTCCTGTCATCCTGCTGATTGCAGA
ACAACCCCCAATCAATTTGTGCTGGCCACATGTACAATTTAATACCAAAT
TTCCCCAATCGTTGCCTCATACCCCTGTGCGCATCCTCCTATTTCCTTCC
ACTCTTGTCGGTTGCATCCACATGTGCATAATATTTGTGTGCCATTTGTG
TTGAGCGTCTTGTTCGTTCTGCAACTTAGCTAGTATAATTGATATTCTGA
TCATATCACAAC back to topCoding sequence (CDS) from alignment at ch6:2736227..2739988- >KJC3_008692-T1 ID=KJC3_008692-T1|Name=KJC3_008692-T1|organism=Aspergillus niger KJC3|type=CDS|length=3678bp|location=Sequence derived from alignment at ch6:2736227..2739988- (Aspergillus niger KJC3) TGTTCATCCATCCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTG TCAGCGCACAGCTCTTGCCCATCCCTTTCCCCATCGCCATCTCCCGTGGT CCCCACATTCGTTGCCCAGCCTCAAGGTCTGCCGACCGAGCAGTCCAGCT CCGACTTCTGTGACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCC ACCCCTGCTGAGCTGCCGCCTCTGCCCACGCTCTCCTGCGATGACGAGGA GCCTCGGGTGGTTCTGGGCAGCGAGGCCGTGACCCTTCCTGTCCATGAGA CCCTCTCTCCCGCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGC CTGCCGACCTTTGACAGCTTCTCGGACCTGGACTCGGAAGACGAATTCGT CAACCGCCTGGTCGACTTCCCCCCTAGTGGCAATGCCTACTACTTGGGTG AGAAGAGGCAGCGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTC TTCAGTGAGCAGAGCTTCGACGAGTCTGACGAGCAAGATCTCTCTCAGTC CAGTCTCCCTTACCTGGGAAGCCACGACTTCACTGGCGTCCAGACGAACA TCAATGAAGCTTCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAG TCGCTGAAGCGGGCTAGTACCTCGGACAGCGAAACGGATTCGATTAGCAA GAAGTCGCAGCCTTCGATCAACAGCCGTGCCACCAGCACTGAGACAAACG CCTCGACACCCCAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCG TCGTGCGCTTCTGAGGCTCCTGCTGCCCCCGTCTCGGTCAACCGACGCGG TCGTAAGCAGTCCCTGACGGATGACCCCTCCAAGACCTTCGTGTGCACCC TCTGCTCCCGTCGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGC TCTCTCCACACTCAGGACAAGCCTTTCGAGTGCAATGAGTGCGGTAAGAA GTTCTCGCGGAGCGATAACCTTGCGCAGCACGCTCGCACTCATGCGGGTG GCTCTGTCGTGATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACC CCCTATGAAGAACGAGACCCCAGTACGCTGGGAAATGTTCTCTACGAGGC CGCCAACGCCGCCGCTACCAAGTCCACAACCAGTGAGTCGGATGAGAGTT CCTCTGACTCGCCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGC GACAGCGATGCCTAGATGGACGGAACATACACCATGGCACCTACTTCGGT GCAAGGTCAACCATCATTTGCATACTACGCTGATTCGCAGCAAAGACAAC ATTTCACCAGCCACCCCTCAGATATGCAGTCATACTATGGCCAAGTGCAG GCCTTCCAGCAACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTA CACTGCCCCTCTCATGAACATGCACCAGATGGCTACCACCAATGCCTTCC GTGGTGCCATGAACATGACTCCCATTGCCTCTCCTCAGCCGTCACACCTC AAGCCCACAATTGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGA CACGAGGTTCGTCGGTAACGACTACTACGCATTCCCCTCCACCCCACCAC TCTCCACAGCTGGAAGCTCTATCAGCAGCCCGCCTTCTACCAGCGGCACC CTTCACACCCCGATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGG TGTCAAGGAGGGATGCGAGGGAGACGTCCATGCAGAGATTCTGGCCAATG CTGACTGGGCCCGGTCTGACTCGCCGCCTCTTACACCTGTGTTCATCCAT CCGCCTTCCCTCACCGCCAGCCAAACATCCGAGCTTCTGTCAGCGCACAG CTCTTGCCCATCCCTTTCCCCATCGCCATCTCCCGTGGTCCCCACATTCG TTGCCCAGCCTCAAGGTCTGCCGACCGAGCAGTCCAGCTCCGACTTCTGT GACCCCCGTCAGCTGACGGTTGAGTCCTCCATCAATGCCACCCCTGCTGA GCTGCCGCCTCTGCCCACGCTCTCCTGCGATGACGAGGAGCCTCGGGTGG TTCTGGGCAGCGAGGCCGTGACCCTTCCTGTCCATGAGACCCTCTCTCCC GCCTTCACCTGCTCCTCTTCGGAGGACCCTCTCAGCAGCCTGCCGACCTT TGACAGCTTCTCGGACCTGGACTCGGAAGACGAATTCGTCAACCGCCTGG TCGACTTCCCCCCTAGTGGCAATGCCTACTACTTGGGTGAGAAGAGGCAG CGCGTGGGAACGACATACCCCCTTGAGGAAGAGGAATTCTTCAGTGAGCA GAGCTTCGACGAGTCTGACGAGCAAGATCTCTCTCAGTCCAGTCTCCCTT ACCTGGGAAGCCACGACTTCACTGGCGTCCAGACGAACATCAATGAAGCT TCGGAAGAGATGGGCAACAAGAAGAGGAACAACCGCAAGTCGCTGAAGCG GGCTAGTACCTCGGACAGCGAAACGGATTCGATTAGCAAGAAGTCGCAGC CTTCGATCAACAGCCGTGCCACCAGCACTGAGACAAACGCCTCGACACCC CAGACTGTCCAGGCCCGCCACAACTCCGATGCGCATTCGTCGTGCGCTTC TGAGGCTCCTGCTGCCCCCGTCTCGGTCAACCGACGCGGTCGTAAGCAGT CCCTGACGGATGACCCCTCCAAGACCTTCGTGTGCACCCTCTGCTCCCGT CGCTTCCGTCGCCAAGAGCACCTCAAGCGTCACTACCGCTCTCTCCACAC TCAGGACAAGCCTTTCGAGTGCAATGAGTGCGGTAAGAAGTTCTCGCGGA GCGATAACCTTGCGCAGCACGCTCGCACTCATGCGGGTGGCTCTGTCGTG ATGGGCGTCATCGACACCGGCAATGCGACCCCGCCAACCCCCTATGAAGA ACGAGACCCCAGTACGCTGGGAAATGTTCTCTACGAGGCCGCCAACGCCG CCGCTACCAAGTCCACAACCAGTGAGTCGGATGAGAGTTCCTCTGACTCG CCGGTTGCCGACCGACGGGCGCCCAAGAAGCGCAAGCGCGACAGCGATGC CTAGATGGACGGAACATACACCATGGCACCTACTTCGGTGCAAGGTCAAC CATCATTTGCATACTACGCTGATTCGCAGCAAAGACAACATTTCACCAGC CACCCCTCAGATATGCAGTCATACTATGGCCAAGTGCAGGCCTTCCAGCA ACAACCACAGCACTGCATGCCGGAGCAGCAGACACTCTACACTGCCCCTC TCATGAACATGCACCAGATGGCTACCACCAATGCCTTCCGTGGTGCCATG AACATGACTCCCATTGCCTCTCCTCAGCCGTCACACCTCAAGCCCACAAT TGTTGTGCAGCAGGGCTCTCCCGCCCTGATGCCTCTGGACACGAGGTTCG TCGGTAACGACTACTACGCATTCCCCTCCACCCCACCACTCTCCACAGCT GGAAGCTCTATCAGCAGCCCGCCTTCTACCAGCGGCACCCTTCACACCCC GATCAATGACAGCTTCTTCGCTTTCGAGAAGGTGGAAGGTGTCAAGGAGG GATGCGAGGGAGACGTCCATGCAGAGATTCTGGCCAATGCTGACTGGGCC CGGTCTGACTCGCCGCCTCTTACACCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008692-T1.utr3p1 | KJC3_008692-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036236 |
DBxref | InterPro:IPR013087 |
DBxref | PFAM:PF12874 |
DBxref | PFAM:PF00096 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2736227..2739988 - |
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