You are here

Home

KJC3_008694-T1, KJC3_008694-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008694-T1
Unique NameKJC3_008694-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2753058..2754409-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008694-T1 ID=KJC3_008694-T1|Name=KJC3_008694-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1352bp|location=Sequence derived from alignment at ch6:2753058..2754409- (Aspergillus niger KJC3)
AACCTCCTTCCATCTCCTTCGCGTCATTCACTACGCGACATACACCTCCA
CGATGTCGACACTCGTGCAAATCAACTCACGCGAGCAATTCAGCTCTCTT
CTGAGCTCCTCCACCTTTGTTGTCGCCGACTGTGAGCTCCCATCTGCTGT
CCCCCACCTTCCCCTCCCCACCACCACCTATTCACTTCCTCGCAACGTCA
CTCCATCACTTGCATTCAAACAAACCACATCAAGAACAGCAAACTAACCC
ATACAAACAAACATAGTCTACGCAGATTGGTGCGGACCATGCAAAGCCAT
CGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCACGCCCGAACAAGA
TCACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCAAGGCAG
TATGGGATTACAGCGTACGTGCCCATCCCACCGAGCCACCACCATACACA
AACAAAATACAATGCAGCTACTAACCCATACTCAAGAATGCCCACCTTCG
TCCTCTTCGAACGCGGCCGCCCAACCTCCACCGTCCGCGGCGCCAACGCC
AAAGAGCTCAACGACCTAGTGCGCAAGCTCGCCACGGAAGCCGAAAAAGC
GCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGCGTAGGCTGGATCGGCG
CCCCGGCTCCCAAGAACTACAGCGATATCTCAGACCAATACGACCCGAAG
GGTCTGGAGCTACTGAACCGGGCGAGCGAGTTCGGCACGGCCAAGACTCT
CTTCGATAGCTCGAAGCCATCCTCCTTGAACAACGCCAAGGGCAAGGCCG
GGGCGGCACCGGATTGGGTGGAGAGTGATACGGATGAGCAGCTGATGCTG
TTTATCCCGTTCCAGTCTACGCTGAAGGTGCATTCGTTGCAGATTACCTC
GCTTCCGCCATCGGCGGACGAGGAGGTTGAGGATGAGGACGAGCGGCCGA
TGCGTCCTCGGACGGTGTCGTTGTATACGAATCGGTCGCATGTGCTGGGA
TTCGATGAGGCAGATGATATCCCTGCTGTGCAGACGGTTACGATTCAGCC
GGAGGATTGGGATCCCAAGACGGGTACGGCGAAGGTGGATTTGCGGTTCG
TCAAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCTTTGTGGATGGAGAT
GGGGATAGCGAGAAGCTGCGGGTTGATCGGGTGCGCATTTTTGGAGAGGC
AGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAGATTGGTGATGAGCCGG
GTGAGTAGGCAGATACTCACAGATGAGTATGAGTAGCAGTAGTAGATATA
TGATAGCGACGCACTAGAACAGAACAATTACAGAGAAACCATTACTATGC
TC
back to top

Coding sequence (CDS) from alignment at ch6:2753058..2754409-

>KJC3_008694-T1 ID=KJC3_008694-T1|Name=KJC3_008694-T1|organism=Aspergillus niger KJC3|type=CDS|length=2997bp|location=Sequence derived from alignment at ch6:2753058..2754409- (Aspergillus niger KJC3)
AATGCCCACCTTCGTCCTCTTCGAACGCGGCCGCCCAACCTCCACCGTCC
GCGGCGCCAACGCCAAAGAGCTCAACGACCTAGTGCGCAAGCTCGCCACG
GAAGCCGAAAAAGCGCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGCGT
AGGCTGGATCGGCGCCCCGGCTCCCAAGAACTACAGCGATATCTCAGACC
AATACGACCCGAAGGGTCTGGAGCTACTGAACCGGGCGAGCGAGTTCGGC
ACGGCCAAGACTCTCTTCGATAGCTCGAAGCCATCCTCCTTGAACAACGC
CAAGGGCAAGGCCGGGGCGGCACCGGATTGGGTGGAGAGTGATACGGATG
AGCAGCTGATGCTGTTTATCCCGTTCCAGTCTACGCTGAAGGTGCATTCG
TTGCAGATTACCTCGCTTCCGCCATCGGCGGACGAGGAGGTTGAGGATGA
GGACGAGCGGCCGATGCGTCCTCGGACGGTGTCGTTGTATACGAATCGGT
CGCATGTGCTGGGATTCGATGAGGCAGATGATATCCCTGCTGTGCAGACG
GTTACGATTCAGCCGGAGGATTGGGATCCCAAGACGGGTACGGCGAAGGT
GGATTTGCGGTTCGTCAAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCT
TTGTGGATGGAGATGGGGATAGCGAGAAGCTGCGGGTTGATCGGGTGCGC
ATTTTTGGAGAGGCAGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAGAT
TGGTGATGAGCCGGGTGAGTAGTCTACGCAGATTGGTGCGGACCATGCAA
AGCCATCGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCACGCCCGA
ACAAGATCACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCA
AGGCAGTATGGGATTACAGCATGTCGACACTCGTGCAAATCAACTCACGC
GAGCAATTCAGCTCTCTTCTGAGCTCCTCCACCTTTGTTGTCGCCGACTA
ATGCCCACCTTCGTCCTCTTCGAACGCGGCCGCCCAACCTCCACCGTCCG
CGGCGCCAACGCCAAAGAGCTCAACGACCTAGTGCGCAAGCTCGCCACGG
AAGCCGAAAAAGCGCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGCGTA
GGCTGGATCGGCGCCCCGGCTCCCAAGAACTACAGCGATATCTCAGACCA
ATACGACCCGAAGGGTCTGGAGCTACTGAACCGGGCGAGCGAGTTCGGCA
CGGCCAAGACTCTCTTCGATAGCTCGAAGCCATCCTCCTTGAACAACGCC
AAGGGCAAGGCCGGGGCGGCACCGGATTGGGTGGAGAGTGATACGGATGA
GCAGCTGATGCTGTTTATCCCGTTCCAGTCTACGCTGAAGGTGCATTCGT
TGCAGATTACCTCGCTTCCGCCATCGGCGGACGAGGAGGTTGAGGATGAG
GACGAGCGGCCGATGCGTCCTCGGACGGTGTCGTTGTATACGAATCGGTC
GCATGTGCTGGGATTCGATGAGGCAGATGATATCCCTGCTGTGCAGACGG
TTACGATTCAGCCGGAGGATTGGGATCCCAAGACGGGTACGGCGAAGGTG
GATTTGCGGTTCGTCAAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCTT
TGTGGATGGAGATGGGGATAGCGAGAAGCTGCGGGTTGATCGGGTGCGCA
TTTTTGGAGAGGCAGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAGATT
GGTGATGAGCCGGGTGAGTAGTCTACGCAGATTGGTGCGGACCATGCAAA
GCCATCGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCACGCCCGAA
CAAGATCACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCAA
GGCAGTATGGGATTACAGCATGTCGACACTCGTGCAAATCAACTCACGCG
AGCAATTCAGCTCTCTTCTGAGCTCCTCCACCTTTGTTGTCGCCGACTAA
TGCCCACCTTCGTCCTCTTCGAACGCGGCCGCCCAACCTCCACCGTCCGC
GGCGCCAACGCCAAAGAGCTCAACGACCTAGTGCGCAAGCTCGCCACGGA
AGCCGAAAAAGCGCCCGAGGGCAACGACGCCGGCTCCAGCAGCGGCGTAG
GCTGGATCGGCGCCCCGGCTCCCAAGAACTACAGCGATATCTCAGACCAA
TACGACCCGAAGGGTCTGGAGCTACTGAACCGGGCGAGCGAGTTCGGCAC
GGCCAAGACTCTCTTCGATAGCTCGAAGCCATCCTCCTTGAACAACGCCA
AGGGCAAGGCCGGGGCGGCACCGGATTGGGTGGAGAGTGATACGGATGAG
CAGCTGATGCTGTTTATCCCGTTCCAGTCTACGCTGAAGGTGCATTCGTT
GCAGATTACCTCGCTTCCGCCATCGGCGGACGAGGAGGTTGAGGATGAGG
ACGAGCGGCCGATGCGTCCTCGGACGGTGTCGTTGTATACGAATCGGTCG
CATGTGCTGGGATTCGATGAGGCAGATGATATCCCTGCTGTGCAGACGGT
TACGATTCAGCCGGAGGATTGGGATCCCAAGACGGGTACGGCGAAGGTGG
ATTTGCGGTTCGTCAAGTTCCAGAGTGTTACGTCGTTGGTGATTTTCTTT
GTGGATGGAGATGGGGATAGCGAGAAGCTGCGGGTTGATCGGGTGCGCAT
TTTTGGAGAGGCAGGTGAGAAGAGAGAGATGGGTAAGTTGGAGAAGATTG
GTGATGAGCCGGGTGAGTAGTCTACGCAGATTGGTGCGGACCATGCAAAG
CCATCGCCCCGGCATACGAGCAGCTAGCTTCGCAGCTCTCACGCCCGAAC
AAGATCACCTTTACGAAGGTCAACGTTGACAAGAACCAAGACATCGCAAG
GCAGTATGGGATTACAGCATGTCGACACTCGTGCAAATCAACTCACGCGA
GCAATTCAGCTCTCTTCTGAGCTCCTCCACCTTTGTTGTCGCCGACT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008694KJC3_008694Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008694-T1KJC3_008694-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008694-T1.cdsKJC3_008694-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008694-T1.utr3p1KJC3_008694-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008694-T1.exon3KJC3_008694-T1.exon3Aspergillus niger KJC3exon
KJC3_008694-T1.exon2KJC3_008694-T1.exon2Aspergillus niger KJC3exon
KJC3_008694-T1.exon1KJC3_008694-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008694-T1.utr5p1KJC3_008694-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008979
DBxrefInterPro:IPR017937
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR010400
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR037047
DBxrefPFAM:PF00085
DBxrefPFAM:PF06201
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2753058..2754409 -
Powered by Drupal