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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2795045..2797374+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008710-T1 ID=KJC3_008710-T1|Name=KJC3_008710-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2330bp|location=Sequence derived from alignment at ch6:2795045..2797374+ (Aspergillus niger KJC3)
TGTCACCACTCATCAGTTCACATACTTGATTCTGTTCACCACAATATAAC
TGTGTTATGCTGTCACCTCGCTCTTCGAGGCCTTCTGTAGAGATTTGCAG
AATCCAGACCCGCAAGAGTGCGGGGTGTCCAACCTGCCGATCCCACAGGC
CAGGTTGGCGCCGCCACAGCACATTGAGCTAGCTTGAAGAACTACTCCGA
CCGGAACGAGCTGATTATCGAGTGTGCAGATACGAATCTGACTAACCACG
CTAATTAACGCCTCAATGAGTTGTCATGGCTGCTGCGGTGCTCAGCTGTG
GCATCCAGAAGCGGGGTGGGTACTAACCCCCGCTGATTTAAATCCGGCGT
CTTCCCCTCTTTGACCCGCACAGAGTATTACCACCCCCGCTCTACTCTCA
GCTCCCAATCCCTTCATTACACCAGGCACAATGCCTTCTGAAGATGTTTC
AACCGGCTCGGTCAATGTCCCCATTGGCACATTTCCCCAGACATGTTCTT
CGACCGATGTCAATGCCGACCAGGTCGCTTCACAGCTAGTCGAGAAGATC
AACACAGCTCTTAGCAAAGGAGACGTGCAGTCCCTTTCCGACCTGTTCCT
CGAAGATGCCTACTGGCGAGATCATCTCTGCTTAACATGGGACTTCTACA
CCGCGAAAGGCAGAGAAAACATTCAAAGCTTTCTCAAGTCTGGCCGTCTT
CCGAGTAAAGTTGAGATCGACCGCTCGACCGCGTTTCGAGGACCCTACGT
TGGCCCTATCGATGCCTTTGGCGACGTCACAGGAATCCTGTTTTACATTA
CGCTCTCTAGCCCCCTGATCACTGGACAGGGTATCGTTCGGCTGGCAGAA
AAGGACGGCGAGTGGAAGATTTTCACCTTCTATACGTCCATGGAGAGCTT
TGTCGACCACCCAGAAGCGGTGAACTTCAGAAGGCCCCTGGGAGCACAGC
ATGGCGAAAGCTTGGATCGAAAGAACTGGAAAGACCGTCGGACGGCCGAA
ATTGAGGCTAAAGACCGGTCTCCAACTGTCGTGGTTGTCGGTATGCTACT
CATCCAACAACTTGTTGCCATTTTACGTGCTGACCCGAACAGGTGCTGGC
CAGTCTGGTCTCATCATTGCGGCCCGTCTTAAAATGCTAAACATCGACGT
TCTGATCATCGATCGAGAGGAGAATATTGGGGACAACTGGCGCCAACGCT
ACCACCAGCTGGTCCTGCATGACCCTGTGTGGTTTGACCACTTTCCTTAC
ATTCCGTTCCCGCCTAATTGGCCGATCTTCACTCCAAAGGACAAGATAGC
CGAGTGGTTCGACTGCTATGCTAAGCTACTGGAGCTGAATGTGTGGACCA
AGACTAATATCAAGGGGTCCTCATGGGACGACAAAGGAAAGCAGTGGACT
TTGGATTTGCAGCGGCGGAAGGAGGACGGTACGGTGGAGAATCGTACCCT
GAACCCCCGTTATATCATCCAGGCCACCGGCCATTCTGGAAAGAAGAATG
TGCCCGACTTCAAGGGTATGGAATCCTTCCAGGGCGACCTCATCTGCCAT
AGCAGCGAGTTTCGCGGTGCGAAGCCCGGATCGAAAGGTAAAAAAGCCGT
GGTGGTTGGGGCGTGCAATTCCGCCAACGACATTGCACAAGATTACTATG
AGAACGGATATGACGTGACGATGGTGCAGCGCAGCTCAACCTGCGTGGTT
TCCTCAGAGTCAATCGTCGAAATCGGCCTCAAAGGGTTGTACGAGGAAGC
AGGACCCGGAACCGAGGAAGCCGACCTTTACCTTTGGAGTATTCCGGCGG
AGCTGTTTAAAGCACAGCAGATCAAGGTCACCAAGCGTCAGAACGAGAAT
GACCGAGCGACGTTGGAGGGCCTGGCGCGGGCCGGGTTCAAGGTGGACCA
CGGTCCAGACGGTGCGGGTCTGCTCATCAAATACCTCCAACGTGGCGGAG
GCTACTATATCGACGTGGGGGCCAGCCAATTGATCATTGACGGCAAGGTG
AAGGTGAAGCAGGGTCTGGAAATTACCGAGGTCCTCCCTCACGGACTGCG
GTTTGCGGACGGATCGGAGCTCCAGGCGGACGAGATCATCTTGGCGACTG
GGTATCAGAACATGGCCACCCAAGCACAACTCGTGTTCGGCAAAGAGGGC
GCGAAGGTGAAGGATGTCTGGGGATTCGACGAGACGGGCGAAATGCGCAT
GTGGCGGCGGACCGGACACCCAGGCTTGTGGTTCATGGGCGGCAATCTGG
CCGTCTGTCGATATTTCTCGCGGTTGCTGGCGCTACAGATCAAGGCGCTA
GAACTTGGCGTCACTTCCTACGACGGTTAG back to topCoding sequence (CDS) from alignment at ch6:2795045..2797374+ >KJC3_008710-T1 ID=KJC3_008710-T1|Name=KJC3_008710-T1|organism=Aspergillus niger KJC3|type=CDS|length=3696bp|location=Sequence derived from alignment at ch6:2795045..2797374+ (Aspergillus niger KJC3)
ATGCCTTCTGAAGATGTTTCAACCGGCTCGGTCAATGTCCCCATTGGCAC
ATTTCCCCAGACATGTTCTTCGACCGATGTCAATGCCGACCAGGTCGCTT
CACAGCTAGTCGAGAAGATCAACACAGCTCTTAGCAAAGGAGACGTGCAG
TCCCTTTCCGACCTGTTCCTCGAAGATGCCTACTGGCGAGATCATCTCTG
CTTAACATGGGACTTCTACACCGCGAAAGGCAGAGAAAACATTCAAAGCT
TTCTCAAGTCTGGCCGTCTTCCGAGTAAAGTTGAGATCGACCGCTCGACC
GCGTTTCGAGGACCCTACGTTGGCCCTATCGATGCCTTTGGCGACGTCAC
AGGAATCCTGTTTTACATTACGCTCTCTAGCCCCCTGATCACTGGACAGG
GTATCGTTCGGCTGGCAGAAAAGGACGGCGAGTGGAAGATTTTCACCTTC
TATACGTCCATGGAGAGCTTTGTCGACCACCCAGAAGCGGTGAACTTCAG
AAGGCCCCTGGGAGCACAGCATGGCGAAAGCTTGGATCGAAAGAACTGGA
AAGACCGTCGGACGGCCGAAATTGAGGCTAAAGACCGGTCTCCAACTGTC
GTGGTTGTCGGTGCTGGCCAGTCTGGTCTCATCATTGCGGCCCGTCTTAA
AATGCTAAACATCGACGTTCTGATCATCGATCGAGAGGAGAATATTGGGG
ACAACTGGCGCCAACGCTACCACCAGCTGGTCCTGCATGACCCTGTGTGG
TTTGACCACTTTCCTTACATTCCGTTCCCGCCTAATTGGCCGATCTTCAC
TCCAAAGGACAAGATAGCCGAGTGGTTCGACTGCTATGCTAAGCTACTGG
AGCTGAATGTGTGGACCAAGACTAATATCAAGGGGTCCTCATGGGACGAC
AAAGGAAAGCAGTGGACTTTGGATTTGCAGCGGCGGAAGGAGGACGGTAC
GGTGGAGAATCGTACCCTGAACCCCCGTTATATCATCCAGGCCACCGGCC
ATTCTGGAAAGAAGAATGTGCCCGACTTCAAGGGTATGGAATCCTTCCAG
GGCGACCTCATCTGCCATAGCAGCGAGTTTCGCGGTGCGAAGCCCGGATC
GAAAGGTAAAAAAGCCGTGGTGGTTGGGGCGTGCAATTCCGCCAACGACA
TTGCACAAGATTACTATGAGAACGGATATGACGTGACGATGGTGCAGCGC
AGCTCAACCTGCGTGGTTTCCTCAGAGTCAATCGTCGAAATCGGCCTCAA
AGGGTTGTACGAGGAAGCAGGACCCGGAACCGAGGAAGCCGACCTTTACC
TTTGGAGTATTCCGGCGGAGCTGTTTAAAGCACAGCAGATCAAGGTCACC
AAGCGTCAGAACGAGAATGACCGAGCGACGTTGGAGGGCCTGGCGCGGGC
CGGGTTCAAGGTGGACCACGGTCCAGACGGTGCGGGTCTGCTCATCAAAT
ACCTCCAACGTGGCGGAGGCTACTATATCGACGTGGGGGCCAGCCAATTG
ATCATTGACGGCAAGGTGAAGGTGAAGCAGGGTCTGGAAATTACCGAGGT
CCTCCCTCACGGACTGCGGTTTGCGGACGGATCGGAGCTCCAGGCGGACG
AGATCATCTTGGCGACTGGGTATCAGAACATGGCCACCCAAGCACAACTC
GTGTTCGGCAAAGAGGGCGCGAAGGTGAAGGATGTCTGGGGATTCGACGA
GACGGGCGAAATGCGCATGTGGCGGCGGACCGGACACCCAGGCTTGTGGT
TCATGGGCGGCAATCTGGCCGTCTGTCGATATTTCTCGCGGTTGCTGGCG
CTACAGATCAAGGCGCTAGAACTTGGCGTCACTTCCTACGACGGTTAGAT
GCCTTCTGAAGATGTTTCAACCGGCTCGGTCAATGTCCCCATTGGCACAT
TTCCCCAGACATGTTCTTCGACCGATGTCAATGCCGACCAGGTCGCTTCA
CAGCTAGTCGAGAAGATCAACACAGCTCTTAGCAAAGGAGACGTGCAGTC
CCTTTCCGACCTGTTCCTCGAAGATGCCTACTGGCGAGATCATCTCTGCT
TAACATGGGACTTCTACACCGCGAAAGGCAGAGAAAACATTCAAAGCTTT
CTCAAGTCTGGCCGTCTTCCGAGTAAAGTTGAGATCGACCGCTCGACCGC
GTTTCGAGGACCCTACGTTGGCCCTATCGATGCCTTTGGCGACGTCACAG
GAATCCTGTTTTACATTACGCTCTCTAGCCCCCTGATCACTGGACAGGGT
ATCGTTCGGCTGGCAGAAAAGGACGGCGAGTGGAAGATTTTCACCTTCTA
TACGTCCATGGAGAGCTTTGTCGACCACCCAGAAGCGGTGAACTTCAGAA
GGCCCCTGGGAGCACAGCATGGCGAAAGCTTGGATCGAAAGAACTGGAAA
GACCGTCGGACGGCCGAAATTGAGGCTAAAGACCGGTCTCCAACTGTCGT
GGTTGTCGGTGCTGGCCAGTCTGGTCTCATCATTGCGGCCCGTCTTAAAA
TGCTAAACATCGACGTTCTGATCATCGATCGAGAGGAGAATATTGGGGAC
AACTGGCGCCAACGCTACCACCAGCTGGTCCTGCATGACCCTGTGTGGTT
TGACCACTTTCCTTACATTCCGTTCCCGCCTAATTGGCCGATCTTCACTC
CAAAGGACAAGATAGCCGAGTGGTTCGACTGCTATGCTAAGCTACTGGAG
CTGAATGTGTGGACCAAGACTAATATCAAGGGGTCCTCATGGGACGACAA
AGGAAAGCAGTGGACTTTGGATTTGCAGCGGCGGAAGGAGGACGGTACGG
TGGAGAATCGTACCCTGAACCCCCGTTATATCATCCAGGCCACCGGCCAT
TCTGGAAAGAAGAATGTGCCCGACTTCAAGGGTATGGAATCCTTCCAGGG
CGACCTCATCTGCCATAGCAGCGAGTTTCGCGGTGCGAAGCCCGGATCGA
AAGGTAAAAAAGCCGTGGTGGTTGGGGCGTGCAATTCCGCCAACGACATT
GCACAAGATTACTATGAGAACGGATATGACGTGACGATGGTGCAGCGCAG
CTCAACCTGCGTGGTTTCCTCAGAGTCAATCGTCGAAATCGGCCTCAAAG
GGTTGTACGAGGAAGCAGGACCCGGAACCGAGGAAGCCGACCTTTACCTT
TGGAGTATTCCGGCGGAGCTGTTTAAAGCACAGCAGATCAAGGTCACCAA
GCGTCAGAACGAGAATGACCGAGCGACGTTGGAGGGCCTGGCGCGGGCCG
GGTTCAAGGTGGACCACGGTCCAGACGGTGCGGGTCTGCTCATCAAATAC
CTCCAACGTGGCGGAGGCTACTATATCGACGTGGGGGCCAGCCAATTGAT
CATTGACGGCAAGGTGAAGGTGAAGCAGGGTCTGGAAATTACCGAGGTCC
TCCCTCACGGACTGCGGTTTGCGGACGGATCGGAGCTCCAGGCGGACGAG
ATCATCTTGGCGACTGGGTATCAGAACATGGCCACCCAAGCACAACTCGT
GTTCGGCAAAGAGGGCGCGAAGGTGAAGGATGTCTGGGGATTCGACGAGA
CGGGCGAAATGCGCATGTGGCGGCGGACCGGACACCCAGGCTTGTGGTTC
ATGGGCGGCAATCTGGCCGTCTGTCGATATTTCTCGCGGTTGCTGGCGCT
ACAGATCAAGGCGCTAGAACTTGGCGTCACTTCCTACGACGGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008710-T1.utr5p1 | KJC3_008710-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13738 |
| DBxref | PFAM:PF07992 |
| DBxref | PFAM:PF13450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2795045..2797374 + |
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