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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2796564..2798866- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008711-T1 ID=KJC3_008711-T1|Name=KJC3_008711-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2303bp|location=Sequence derived from alignment at ch6:2796564..2798866- (Aspergillus niger KJC3)
ATCCTTGACATTCCTCACTTCTACTACTACTACCACTACCACTACCCTAT
ACACTAGTACTAGTAGTAGTATACAAAAATGTCCACCCAAGACAGCGACG
CAGAGAGCTCTATCTCCAGCCAAACAAGGTACACACCTACCTACCTACCT
ACAAACCATTCATATACTTCAATGATCATAACCTAACCCACCATGACAAT
CCAATAGAACAAAAACCCCCAAACACACCTTTCCCCTCGCGCATCCCCCT
CCCAAATCCTCCCCCTGCCTGCGCCTCACCCCGCGCCTCCTCCTCCAAGT
CCAACAACTCTCAATAACATCAAACCGACACCGCGCCCTCCCCATCCTCG
AAATCTACCAACCCCCACGACTAGGAAAATCCCTCCCCAATTGTCCGCGC
AAACTGCACGGCCGGGATCTCTACATCCTCCAAAGCGACGCCTACACCGA
CATAACCCCAAAATCCTCATCGGAAGAAACTACCTACCCAATCGCAGCGG
GGGTAATCTACAATAACACAAACACCAACTCCAATACCAAGAAACCCACC
ACCACACAACCCCAACAAGACAATACCAATACCCCCGAAGAAAAATCCGA
CGAAATCTACCTCCCCACCACGCACCAATCATACACCGCAACCCGCACGT
CGCGCGGCAACTACCGCTTCATCCTGCGCCAGAAAAACACGTCCGGAGAA
ACCGTCATTCTCGAATGGCGGAGAAAGACGACGCAGGGTTCCGGACGGCC
AAGAACCGCCTCGGGCTCCGCATCGGCGGTGTCGGGATCAACGGACTCCG
ATACCATACACGATAATAATGGAAAGGCTTGCGAGGAGGAGACGACGAAC
GACCCTAGTAGTTCCGATGCTAACCCCCGGTTTGTGCTGTGCGTTAGTGC
CATCGGAGGAGCAGCTGGTGCTGGCGTCGGCGCCGATCAGCGTGTCAGAC
GGTCGGGGCTGGCTGGGCTAGAGAAAAAGGGGTTGAGGGTTGGCGGGTGG
GATGCGAGACAAGTGCGGTTTTTGGAGGAGGTGGGGATAGGTGTTGGAGA
GGAGGTTGTCACGCTGGTTTTGACGCTGGGGGTGTATGTTGGGTGGATGG
AGGGATGGTTGTAAGACTACTTACTATTTACTTACTACTTACTATCCTGT
GAGTGTGTGAGTAGAAGTCGGTGGTTTCAGGGGCATCCTTGGTCGGTGTT
TGGTTTGTTCGGGTGTTGTTGGTGGGAGTCTTGGCTGGTGCTTTTTTTGA
GGAACACGGGATTCACAGAAATCTCCGCTCCGATGGTTTTCATTACTATC
GCCTGGAGACTGCATATTTTTATTTTTTTGCATAGCGGGTCTACTATGGA
TAAATTTGTGATACCTGGGCAGATTTTCATTTCCAATAGATTGTTGAGTT
GCGACATTTATTGCAGCTGCTCGACTTTGTTTTCCAATTATATCTGCTCC
GTACCTATTTCCTTTGTCTTCGCCCTACCGCCAAGTCCCTCACTAACCGT
CGTAGGAAGTGACGCCAAGTTCTAGCGCCTTGATCTGTAGCGCCAGCAAC
CGCGAGAAATATCGACAGACGGCCAGATTGCCGCCCATGAACCACAAGCC
TGGGTGTCCGGTCCGCCGCCACATGCGCATTTCGCCCGTCTCGTCGAATC
CCCAGACATCCTTCACCTTCGCGCCCTCTTTGCCGAACACGAGTTGTGCT
TGGGTGGCCATGTTCTGATACCCAGTCGCCAAGATGATCTCGTCCGCCTG
GAGCTCCGATCCGTCCGCAAACCGCAGTCCGTGAGGGAGGACCTCGGTAA
TTTCCAGACCCTGCTTCACCTTCACCTTGCCGTCAATGATCAATTGGCTG
GCCCCCACGTCGATATAGTAGCCTCCGCCACGTTGGAGGTATTTGATGAG
CAGACCCGCACCGTCTGGACCGTGGTCCACCTTGAACCCGGCCCGCGCCA
GGCCCTCCAACGTCGCTCGGTCATTCTCGTTCTGACGCTTGGTGACCTTG
ATCTGCTGTGCTTTAAACAGCTCCGCCGGAATACTCCAAAGGTAAAGGTC
GGCTTCCTCGGTTCCGGGTCCTGCTTCCTCGTACAACCCTTTGAGGCCGA
TTTCGACGATTGACTCTGAGGAAACCACGCAGGTTGAGCTGCGCTGCACC
ATCGTCACGTCATATCCGTTCTCATAGTAATCTTGTGCAATGTCGTTGGC
GGAATTGCACGCCCCAACCACCACGGCTTTTTTACCTTTCGATCCGGGCT
TCGCACCGCGAAACTCGCTGCTATGGCAGATGAGGTCGCCCTGGAAGGAT
TCC back to topCoding sequence (CDS) from alignment at ch6:2796564..2798866- >KJC3_008711-T1 ID=KJC3_008711-T1|Name=KJC3_008711-T1|organism=Aspergillus niger KJC3|type=CDS|length=1914bp|location=Sequence derived from alignment at ch6:2796564..2798866- (Aspergillus niger KJC3)
AACAAAAACCCCCAAACACACCTTTCCCCTCGCGCATCCCCCTCCCAAAT
CCTCCCCCTGCCTGCGCCTCACCCCGCGCCTCCTCCTCCAAGTCCAACAA
CTCTCAATAACATCAAACCGACACCGCGCCCTCCCCATCCTCGAAATCTA
CCAACCCCCACGACTAGGAAAATCCCTCCCCAATTGTCCGCGCAAACTGC
ACGGCCGGGATCTCTACATCCTCCAAAGCGACGCCTACACCGACATAACC
CCAAAATCCTCATCGGAAGAAACTACCTACCCAATCGCAGCGGGGGTAAT
CTACAATAACACAAACACCAACTCCAATACCAAGAAACCCACCACCACAC
AACCCCAACAAGACAATACCAATACCCCCGAAGAAAAATCCGACGAAATC
TACCTCCCCACCACGCACCAATCATACACCGCAACCCGCACGTCGCGCGG
CAACTACCGCTTCATCCTGCGCCAGAAAAACACGTCCGGAGAAACCGTCA
TTCTCGAATGGCGGAGAAAGACGACGCAGGGTTCCGGACGGCCAAGAACC
GCCTCGGGCTCCGCATCGGCGGTGTCGGGATCAACGGACTCCGATACCAT
ACACGATAATAATGGAAAGGCTTGCGAGGAGGAGACGACGAACGACCCTA
GTAGTTCCGATGCTAACCCCCGGTTTGTGCTGTGCGTTAGTGCCATCGGA
GGAGCAGCTGGTGCTGGCGTCGGCGCCGATCAGCGTGTCAGACGGTCGGG
GCTGGCTGGGCTAGAGAAAAAGGGGTTGAGGGTTGGCGGGTGGGATGCGA
GACAAGTGCGGTTTTTGGAGGAGGTGGGGATAGGTGTTGGAGAGGAGGTT
GTCACGCTGGTTTTGACGCTGGGGGTGTATGTTGGGTGGATGGAGGGATG
GTTGTAAATGTCCACCCAAGACAGCGACGCAGAGAGCTCTATCTCCAGCC
AAACAAGAACAAAAACCCCCAAACACACCTTTCCCCTCGCGCATCCCCCT
CCCAAATCCTCCCCCTGCCTGCGCCTCACCCCGCGCCTCCTCCTCCAAGT
CCAACAACTCTCAATAACATCAAACCGACACCGCGCCCTCCCCATCCTCG
AAATCTACCAACCCCCACGACTAGGAAAATCCCTCCCCAATTGTCCGCGC
AAACTGCACGGCCGGGATCTCTACATCCTCCAAAGCGACGCCTACACCGA
CATAACCCCAAAATCCTCATCGGAAGAAACTACCTACCCAATCGCAGCGG
GGGTAATCTACAATAACACAAACACCAACTCCAATACCAAGAAACCCACC
ACCACACAACCCCAACAAGACAATACCAATACCCCCGAAGAAAAATCCGA
CGAAATCTACCTCCCCACCACGCACCAATCATACACCGCAACCCGCACGT
CGCGCGGCAACTACCGCTTCATCCTGCGCCAGAAAAACACGTCCGGAGAA
ACCGTCATTCTCGAATGGCGGAGAAAGACGACGCAGGGTTCCGGACGGCC
AAGAACCGCCTCGGGCTCCGCATCGGCGGTGTCGGGATCAACGGACTCCG
ATACCATACACGATAATAATGGAAAGGCTTGCGAGGAGGAGACGACGAAC
GACCCTAGTAGTTCCGATGCTAACCCCCGGTTTGTGCTGTGCGTTAGTGC
CATCGGAGGAGCAGCTGGTGCTGGCGTCGGCGCCGATCAGCGTGTCAGAC
GGTCGGGGCTGGCTGGGCTAGAGAAAAAGGGGTTGAGGGTTGGCGGGTGG
GATGCGAGACAAGTGCGGTTTTTGGAGGAGGTGGGGATAGGTGTTGGAGA
GGAGGTTGTCACGCTGGTTTTGACGCTGGGGGTGTATGTTGGGTGGATGG
AGGGATGGTTGTAAATGTCCACCCAAGACAGCGACGCAGAGAGCTCTATC
TCCAGCCAAACAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008711-T1.utr5p1 | KJC3_008711-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2796564..2798866 - |
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