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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2806995..2808721+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008714-T1 ID=KJC3_008714-T1|Name=KJC3_008714-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1727bp|location=Sequence derived from alignment at ch6:2806995..2808721+ (Aspergillus niger KJC3) ATGTCCGAGCCCGAAGCTGCTGCGTCCCTGGAACGGGATCCAACAGAGGA
TTCCAACCACTATATCGATGGAGTTAAGCTTGCCGCTCTCATGATTTCAA
TATCCCTTTGCATGTTCCTTGTGTCTCTGGTAAGTTCATCCTTCCCGTTT
TGAGGGCTTAAAGATGAAGGAGCTGACCCGTGAACGCTCGCCGTCAGGAC
CGGACAATCATCTCGACCGCCCTCCCTACCATCACCAACGAATTCCATTC
CTTCGACGACATGGCATGGTACGGGAGCGCCTACATGTTGACCGGCTCGG
TAATGCAGCTGCCCCTGGGGACCCTGTACCAGATATATGCGCCCAAATAC
GTCTTTCTAGCGATTATGCTGGTGTTCATCGTGGGCTCGGCCGTGTGCGG
CGGGGCCTCGAATTCCCTTGCGGTGATCCTTGGCCGTGCTGTTCAAGGAA
TAGGGTCGGCCGGAATTACAGCCGGGTGCATGATCATCATCACTGAGACC
GTTCCGTTGCCTAAGAGGCCGATGTACATGGGAATACTGGGAGCCGTCTT
TGGCGTTTCGGCCATCGTTGGACCCCTGCTTGGGGGTGCTTTGACCACGG
GTGCTTCGTGGCGGTGGTGCTTCTTGATTAATTTGCCTATAGGCGCGGTT
GCGATGATAGTCATATTTTTGGTGTTTCCTGATGGGGGGAAAGGGGGCGA
TAAGGATGAGGTGGAACAGGATCGAACAGGGATTACTGCTGGTGGTGGCA
GCATGCGCCTTTGGAAGCGGATCCAACGGTTCAACCCGCTTGGTCTTTGT
TTCATGGTTCCTGCTGTAGTATGTCTGGTGCTCGCCCTGGAATGGGGTGG
CTCGACCTATGCTTGGAAATCCGCCCGGATAATTACGCTCCTCGTCCTTA
GCGGCGTGCTTTTCATTCTGTTTGGCGTGGACCAGTGGCTAGAAGGGGAG
TACTCGACAATCAAGCCACAGCTCATCGCAGACAGGACCGTTGCGGCCAG
TGCGCTGTACACAGCATTTATCGGCGCATCCATGATGAGCCTCGTCTATT
ACTTGCCAATCTGGTTCCAAGCAATCAAGGGCGCCAGTGCGGTCAAGTCG
GGAGAGATGAACATCCCGTTACTCCTATCCCTGGTCATCGGATCCATGAT
TTCGGGGATGCTGGTATCGAAGCTCGTTGGCTACCCATCACTGTTCATGA
TCATCTCATCGGTCCTGATGACGGTGGGTGCGGGCCTGCTCAGTACGTTC
ACAGTGGCAACAGGCCACGCTAAATGGATCTCATATCAGGTTCTCTTTGG
TATTGGCCTGGGTCTGGGCATGCAGCAGGGTGCCACAGCCGTGCAGATGG
TGGTTCACAAAGCTGACGTGCCTTCCGTACTCTCCCTTTTGTTCTTCTGT
CAACAGCTGGGAGGTTCAATTGCCCTTGCCATTGCACAGAATATTGTCTC
CAGCAAACTAGTCTCGGGTCTGCATGCCAGCCTGCCAGACGTGGATGCAT
CAGCCATCGTGAGCTCCGGGGCGACGCAACTGAGGAGCATGGTGCCGACA
AAGTCCCTAGCCACTCTCCTGCAGATATATAACGAGGCCGTGACAACTTC
TTTCTACCTCACCGCAGCCACGTCTGCAGTTACATTCCTTGCTGCGATTT
TTATTGTACCGAGGAGTTTACTTAAGACGTATTGCGAAGACGAGGAAGTA
AGTTCGGGTCAAAACAGGCCGGTCTAG back to topCoding sequence (CDS) from alignment at ch6:2806995..2808721+ >KJC3_008714-T1 ID=KJC3_008714-T1|Name=KJC3_008714-T1|organism=Aspergillus niger KJC3|type=CDS|length=3318bp|location=Sequence derived from alignment at ch6:2806995..2808721+ (Aspergillus niger KJC3) ATGTCCGAGCCCGAAGCTGCTGCGTCCCTGGAACGGGATCCAACAGAGGA TTCCAACCACTATATCGATGGAGTTAAGCTTGCCGCTCTCATGATTTCAA TATCCCTTTGCATGTTCCTTGTGTCTCTGGACCGGACAATCATCTCGACC GCCCTCCCTACCATCACCAACGAATTCCATTCCTTCGACGACATGGCATG GTACGGGAGCGCCTACATGTTGACCGGCTCGGTAATGCAGCTGCCCCTGG GGACCCTGTACCAGATATATGCGCCCAAATACGTCTTTCTAGCGATTATG CTGGTGTTCATCGTGGGCTCGGCCGTGTGCGGCGGGGCCTCGAATTCCCT TGCGGTGATCCTTGGCCGTGCTGTTCAAGGAATAGGGTCGGCCGGAATTA CAGCCGGGTGCATGATCATCATCACTGAGACCGTTCCGTTGCCTAAGAGG CCGATGTACATGGGAATACTGGGAGCCGTCTTTGGCGTTTCGGCCATCGT TGGACCCCTGCTTGGGGGTGCTTTGACCACGGGTGCTTCGTGGCGGTGGT GCTTCTTGATTAATTTGCCTATAGGCGCGGTTGCGATGATAGTCATATTT TTGGTGTTTCCTGATGGGGGGAAAGGGGGCGATAAGGATGAGGTGGAACA GGATCGAACAGGGATTACTGCTGGTGGTGGCAGCATGCGCCTTTGGAAGC GGATCCAACGGTTCAACCCGCTTGGTCTTTGTTTCATGGTTCCTGCTGTA GTATGTCTGGTGCTCGCCCTGGAATGGGGTGGCTCGACCTATGCTTGGAA ATCCGCCCGGATAATTACGCTCCTCGTCCTTAGCGGCGTGCTTTTCATTC TGTTTGGCGTGGACCAGTGGCTAGAAGGGGAGTACTCGACAATCAAGCCA CAGCTCATCGCAGACAGGACCGTTGCGGCCAGTGCGCTGTACACAGCATT TATCGGCGCATCCATGATGAGCCTCGTCTATTACTTGCCAATCTGGTTCC AAGCAATCAAGGGCGCCAGTGCGGTCAAGTCGGGAGAGATGAACATCCCG TTACTCCTATCCCTGGTCATCGGATCCATGATTTCGGGGATGCTGGTATC GAAGCTCGTTGGCTACCCATCACTGTTCATGATCATCTCATCGGTCCTGA TGACGGTGGGTGCGGGCCTGCTCAGTACGTTCACAGTGGCAACAGGCCAC GCTAAATGGATCTCATATCAGGTTCTCTTTGGTATTGGCCTGGGTCTGGG CATGCAGCAGGGTGCCACAGCCGTGCAGATGGTGGTTCACAAAGCTGACG TGCCTTCCGTACTCTCCCTTTTGTTCTTCTGTCAACAGCTGGGAGGTTCA ATTGCCCTTGCCATTGCACAGAATATTGTCTCCAGCAAACTAGTCTCGGG TCTGCATGCCAGCCTGCCAGACGTGGATGCATCAGCCATCGTGAGCTCCG GGGCGACGCAACTGAGGAGCATGGTGCCGACAAAGTCCCTAGCCACTCTC CTGCAGATATATAACGAGGCCGTGACAACTTCTTTCTACCTCACCGCAGC CACGTCTGCAGTTACATTCCTTGCTGCGATTTTTATTGTACCGAGGAGTT TACTTAAGACGTATTGCGAAGACGAGGAAGTAAGTTCGGGTCAAAACAGG CCGGTCTAGATGTCCGAGCCCGAAGCTGCTGCGTCCCTGGAACGGGATCC AACAGAGGATTCCAACCACTATATCGATGGAGTTAAGCTTGCCGCTCTCA TGATTTCAATATCCCTTTGCATGTTCCTTGTGTCTCTGGACCGGACAATC ATCTCGACCGCCCTCCCTACCATCACCAACGAATTCCATTCCTTCGACGA CATGGCATGGTACGGGAGCGCCTACATGTTGACCGGCTCGGTAATGCAGC TGCCCCTGGGGACCCTGTACCAGATATATGCGCCCAAATACGTCTTTCTA GCGATTATGCTGGTGTTCATCGTGGGCTCGGCCGTGTGCGGCGGGGCCTC GAATTCCCTTGCGGTGATCCTTGGCCGTGCTGTTCAAGGAATAGGGTCGG CCGGAATTACAGCCGGGTGCATGATCATCATCACTGAGACCGTTCCGTTG CCTAAGAGGCCGATGTACATGGGAATACTGGGAGCCGTCTTTGGCGTTTC GGCCATCGTTGGACCCCTGCTTGGGGGTGCTTTGACCACGGGTGCTTCGT GGCGGTGGTGCTTCTTGATTAATTTGCCTATAGGCGCGGTTGCGATGATA GTCATATTTTTGGTGTTTCCTGATGGGGGGAAAGGGGGCGATAAGGATGA GGTGGAACAGGATCGAACAGGGATTACTGCTGGTGGTGGCAGCATGCGCC TTTGGAAGCGGATCCAACGGTTCAACCCGCTTGGTCTTTGTTTCATGGTT CCTGCTGTAGTATGTCTGGTGCTCGCCCTGGAATGGGGTGGCTCGACCTA TGCTTGGAAATCCGCCCGGATAATTACGCTCCTCGTCCTTAGCGGCGTGC TTTTCATTCTGTTTGGCGTGGACCAGTGGCTAGAAGGGGAGTACTCGACA ATCAAGCCACAGCTCATCGCAGACAGGACCGTTGCGGCCAGTGCGCTGTA CACAGCATTTATCGGCGCATCCATGATGAGCCTCGTCTATTACTTGCCAA TCTGGTTCCAAGCAATCAAGGGCGCCAGTGCGGTCAAGTCGGGAGAGATG AACATCCCGTTACTCCTATCCCTGGTCATCGGATCCATGATTTCGGGGAT GCTGGTATCGAAGCTCGTTGGCTACCCATCACTGTTCATGATCATCTCAT CGGTCCTGATGACGGTGGGTGCGGGCCTGCTCAGTACGTTCACAGTGGCA ACAGGCCACGCTAAATGGATCTCATATCAGGTTCTCTTTGGTATTGGCCT GGGTCTGGGCATGCAGCAGGGTGCCACAGCCGTGCAGATGGTGGTTCACA AAGCTGACGTGCCTTCCGTACTCTCCCTTTTGTTCTTCTGTCAACAGCTG GGAGGTTCAATTGCCCTTGCCATTGCACAGAATATTGTCTCCAGCAAACT AGTCTCGGGTCTGCATGCCAGCCTGCCAGACGTGGATGCATCAGCCATCG TGAGCTCCGGGGCGACGCAACTGAGGAGCATGGTGCCGACAAAGTCCCTA GCCACTCTCCTGCAGATATATAACGAGGCCGTGACAACTTCTTTCTACCT CACCGCAGCCACGTCTGCAGTTACATTCCTTGCTGCGATTTTTATTGTAC CGAGGAGTTTACTTAAGACGTATTGCGAAGACGAGGAAGTAAGTTCGGGT CAAAACAGGCCGGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_6.14 |
Note | SMCOG1005: EmrB/QacA |
Note | SMCOG1005:Drug resistance transporter |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:2806995..2808721 + |
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