|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2899656..2901375- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008745-T1 ID=KJC3_008745-T1|Name=KJC3_008745-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1720bp|location=Sequence derived from alignment at ch6:2899656..2901375- (Aspergillus niger KJC3)
ATGGAGGAGCCGTGCTACACATGTCGGCGTCGGCGAATTCGCTGCGACCA
GTCTCAGTCGCCTTGTGTAAAGTGCGCGACAAGTGGCTATCAATGCTTTG
CTTCTAGGCCTCTGAGATGGGTCGAAGGCCTAGCGATACGGGGGAAGCTG
CGGGGTGTATCACTGGCAACCAACTCAGCTAGTTCAGCTAAGAAGGCAAA
GTCTCGGAAAGAGTCAGATTTGAGGGATAGTAGTCTTGCACCGGCGACCG
AGTCTGCTCTTTCTGTTGTGCGGTCCTCCGAAGGTCACGGTAAGTATAGC
TGCTGCATACCCCATTGAGAGTATTCAATAAGTCGCTTATTTCCAATCAG
TCGCCCCATCAAAACCTTTGATTAGTATACCCTCGACCATAGGCGATTTC
GCCGCCTCTAACCTGGACGCAGTTTCCAGGTACTACTTGGATTATTGTTA
GTCTTCTCGTTGGGCTGTACACAGACATGTCTAACGCTGCATCAGATAAT
GAAAGCATATGTGGGCTCTTCATCGTTTACGATAGTGATAGGAACCCTCT
TAGGGCCCTCATGTCGCTCGCGCTGCTTGACCACACTCTCCTCAAGTCTG
TACTGGCTCTTGCAGCGCGACACAGGGTAAATAGACATTGTTCGTTCCAT
GACCTCACCATCAAAGCATCATCCGATCAAATGATTGCAAACGCCGACGC
TCTTCGCTTCAAATATCAAGCTATACAAGGGATCGCGCAGGCCCTGGGCG
ATGCGACATCACGAAACAAGGATACGACAGTGGCAAGCATATTCCTCCTA
GTATTTCTCGATCTTCTGGAGTCTGGAAGTGATCGATGGAATGTTCACCT
AGAAGGTGCCAAAAGATTGATGGAGCCAAGTACACCTGATTCGCAAGCTG
TTTCCAGACACGATTCCGGACAAACTATTGAGGATCTGCGTAATTTTCTT
GCCAGTCAGATTTACTCGTAAGCAAGAAGCACTTCAGGTGTTGATTTCCT
GTGACTGACGCATCATCTGACCTTAGGATTGAGACCTTGGGTGGAACATT
TGTACGCCCAAAGCTATTGTCACAGTTTAATTTGCTTGAGGGCCCTCAAT
TTCAGGAGACCGTCGAGCAGTCATTCCTTGGATGTCCGGAATACCTACTG
GACGCTATACGGTATCTCTCTGCGCGAAGAGACACCATTGCCAGCTCCGA
ATGCCATGATGACTCTACCTGGAGCTACTTCATTCAGGATACCATGTCGA
TGATAGACTTCATCCAGCAATTCGACTGTTCCGTATGGGCTTCGTCGCTA
CCATATCTGGGCACCGTCCCTCCAAGAGGTACAAGCTCTCTTTGCACGTT
GGCACAATCGTACAAGATAGGAGCCCTAATTTACGGGAAACGTGTCCTTG
GAGCTCTCACTAAGGAATATTTACCACTCGATGACCTGATACAGGAGTTG
CTTGCCACGATTGAAAGTTTGCAGAACAATGAGACTTTATACAAATGCAT
CCTCTGGCCTATAATCATTGCTGGTCTTGAATGCCAACGACAAGAGCAAA
GAGAGTCCGTGCGGACTTATATGGAGAGTTTCTGGGAACACACCAAATGT
GTGAATGTGATTAATGCTTCCAAGATTATAGAAGACCGCTGGCAGCGATG
CGACAGCACAGAACCTTCACACTGGATATTCTCAATTGGTAATTTGGGCC
GTGACTGGCTTTTGATCTGA back to topCoding sequence (CDS) from alignment at ch6:2899656..2901375- >KJC3_008745-T1 ID=KJC3_008745-T1|Name=KJC3_008745-T1|organism=Aspergillus niger KJC3|type=CDS|length=6204bp|location=Sequence derived from alignment at ch6:2899656..2901375- (Aspergillus niger KJC3)
GATTGAGACCTTGGGTGGAACATTTGTACGCCCAAAGCTATTGTCACAGT
TTAATTTGCTTGAGGGCCCTCAATTTCAGGAGACCGTCGAGCAGTCATTC
CTTGGATGTCCGGAATACCTACTGGACGCTATACGGTATCTCTCTGCGCG
AAGAGACACCATTGCCAGCTCCGAATGCCATGATGACTCTACCTGGAGCT
ACTTCATTCAGGATACCATGTCGATGATAGACTTCATCCAGCAATTCGAC
TGTTCCGTATGGGCTTCGTCGCTACCATATCTGGGCACCGTCCCTCCAAG
AGGTACAAGCTCTCTTTGCACGTTGGCACAATCGTACAAGATAGGAGCCC
TAATTTACGGGAAACGTGTCCTTGGAGCTCTCACTAAGGAATATTTACCA
CTCGATGACCTGATACAGGAGTTGCTTGCCACGATTGAAAGTTTGCAGAA
CAATGAGACTTTATACAAATGCATCCTCTGGCCTATAATCATTGCTGGTC
TTGAATGCCAACGACAAGAGCAAAGAGAGTCCGTGCGGACTTATATGGAG
AGTTTCTGGGAACACACCAAATGTGTGAATGTGATTAATGCTTCCAAGAT
TATAGAAGACCGCTGGCAGCGATGCGACAGCACAGAACCTTCACACTGGA
TATTCTCAATTGGTAATTTGGGCCGTGACTGGCTTTTGATCTGAATAATG
AAAGCATATGTGGGCTCTTCATCGTTTACGATAGTGATAGGAACCCTCTT
AGGGCCCTCATGTCGCTCGCGCTGCTTGACCACACTCTCCTCAAGTCTGT
ACTGGCTCTTGCAGCGCGACACAGGGTAAATAGACATTGTTCGTTCCATG
ACCTCACCATCAAAGCATCATCCGATCAAATGATTGCAAACGCCGACGCT
CTTCGCTTCAAATATCAAGCTATACAAGGGATCGCGCAGGCCCTGGGCGA
TGCGACATCACGAAACAAGGATACGACAGTGGCAAGCATATTCCTCCTAG
TATTTCTCGATCTTCTGGAGTCTGGAAGTGATCGATGGAATGTTCACCTA
GAAGGTGCCAAAAGATTGATGGAGCCAAGTACACCTGATTCGCAAGCTGT
TTCCAGACACGATTCCGGACAAACTATTGAGGATCTGCGTAATTTTCTTG
CCAGTCAGATTTACTCTCGCCCCATCAAAACCTTTGATTAGTATACCCTC
GACCATAGGCGATTTCGCCGCCTCTAACCTGGACGCAGTTTCCAGGTACT
ACTTGGATTATTATGGAGGAGCCGTGCTACACATGTCGGCGTCGGCGAAT
TCGCTGCGACCAGTCTCAGTCGCCTTGTGTAAAGTGCGCGACAAGTGGCT
ATCAATGCTTTGCTTCTAGGCCTCTGAGATGGGTCGAAGGCCTAGCGATA
CGGGGGAAGCTGCGGGGTGTATCACTGGCAACCAACTCAGCTAGTTCAGC
TAAGAAGGCAAAGTCTCGGAAAGAGTCAGATTTGAGGGATAGTAGTCTTG
CACCGGCGACCGAGTCTGCTCTTTCTGTTGTGCGGTCCTCCGAAGGTCAC
GGATTGAGACCTTGGGTGGAACATTTGTACGCCCAAAGCTATTGTCACAG
TTTAATTTGCTTGAGGGCCCTCAATTTCAGGAGACCGTCGAGCAGTCATT
CCTTGGATGTCCGGAATACCTACTGGACGCTATACGGTATCTCTCTGCGC
GAAGAGACACCATTGCCAGCTCCGAATGCCATGATGACTCTACCTGGAGC
TACTTCATTCAGGATACCATGTCGATGATAGACTTCATCCAGCAATTCGA
CTGTTCCGTATGGGCTTCGTCGCTACCATATCTGGGCACCGTCCCTCCAA
GAGGTACAAGCTCTCTTTGCACGTTGGCACAATCGTACAAGATAGGAGCC
CTAATTTACGGGAAACGTGTCCTTGGAGCTCTCACTAAGGAATATTTACC
ACTCGATGACCTGATACAGGAGTTGCTTGCCACGATTGAAAGTTTGCAGA
ACAATGAGACTTTATACAAATGCATCCTCTGGCCTATAATCATTGCTGGT
CTTGAATGCCAACGACAAGAGCAAAGAGAGTCCGTGCGGACTTATATGGA
GAGTTTCTGGGAACACACCAAATGTGTGAATGTGATTAATGCTTCCAAGA
TTATAGAAGACCGCTGGCAGCGATGCGACAGCACAGAACCTTCACACTGG
ATATTCTCAATTGGTAATTTGGGCCGTGACTGGCTTTTGATCTGAATAAT
GAAAGCATATGTGGGCTCTTCATCGTTTACGATAGTGATAGGAACCCTCT
TAGGGCCCTCATGTCGCTCGCGCTGCTTGACCACACTCTCCTCAAGTCTG
TACTGGCTCTTGCAGCGCGACACAGGGTAAATAGACATTGTTCGTTCCAT
GACCTCACCATCAAAGCATCATCCGATCAAATGATTGCAAACGCCGACGC
TCTTCGCTTCAAATATCAAGCTATACAAGGGATCGCGCAGGCCCTGGGCG
ATGCGACATCACGAAACAAGGATACGACAGTGGCAAGCATATTCCTCCTA
GTATTTCTCGATCTTCTGGAGTCTGGAAGTGATCGATGGAATGTTCACCT
AGAAGGTGCCAAAAGATTGATGGAGCCAAGTACACCTGATTCGCAAGCTG
TTTCCAGACACGATTCCGGACAAACTATTGAGGATCTGCGTAATTTTCTT
GCCAGTCAGATTTACTCTCGCCCCATCAAAACCTTTGATTAGTATACCCT
CGACCATAGGCGATTTCGCCGCCTCTAACCTGGACGCAGTTTCCAGGTAC
TACTTGGATTATTATGGAGGAGCCGTGCTACACATGTCGGCGTCGGCGAA
TTCGCTGCGACCAGTCTCAGTCGCCTTGTGTAAAGTGCGCGACAAGTGGC
TATCAATGCTTTGCTTCTAGGCCTCTGAGATGGGTCGAAGGCCTAGCGAT
ACGGGGGAAGCTGCGGGGTGTATCACTGGCAACCAACTCAGCTAGTTCAG
CTAAGAAGGCAAAGTCTCGGAAAGAGTCAGATTTGAGGGATAGTAGTCTT
GCACCGGCGACCGAGTCTGCTCTTTCTGTTGTGCGGTCCTCCGAAGGTCA
CGGATTGAGACCTTGGGTGGAACATTTGTACGCCCAAAGCTATTGTCACA
GTTTAATTTGCTTGAGGGCCCTCAATTTCAGGAGACCGTCGAGCAGTCAT
TCCTTGGATGTCCGGAATACCTACTGGACGCTATACGGTATCTCTCTGCG
CGAAGAGACACCATTGCCAGCTCCGAATGCCATGATGACTCTACCTGGAG
CTACTTCATTCAGGATACCATGTCGATGATAGACTTCATCCAGCAATTCG
ACTGTTCCGTATGGGCTTCGTCGCTACCATATCTGGGCACCGTCCCTCCA
AGAGGTACAAGCTCTCTTTGCACGTTGGCACAATCGTACAAGATAGGAGC
CCTAATTTACGGGAAACGTGTCCTTGGAGCTCTCACTAAGGAATATTTAC
CACTCGATGACCTGATACAGGAGTTGCTTGCCACGATTGAAAGTTTGCAG
AACAATGAGACTTTATACAAATGCATCCTCTGGCCTATAATCATTGCTGG
TCTTGAATGCCAACGACAAGAGCAAAGAGAGTCCGTGCGGACTTATATGG
AGAGTTTCTGGGAACACACCAAATGTGTGAATGTGATTAATGCTTCCAAG
ATTATAGAAGACCGCTGGCAGCGATGCGACAGCACAGAACCTTCACACTG
GATATTCTCAATTGGTAATTTGGGCCGTGACTGGCTTTTGATCTGAATAA
TGAAAGCATATGTGGGCTCTTCATCGTTTACGATAGTGATAGGAACCCTC
TTAGGGCCCTCATGTCGCTCGCGCTGCTTGACCACACTCTCCTCAAGTCT
GTACTGGCTCTTGCAGCGCGACACAGGGTAAATAGACATTGTTCGTTCCA
TGACCTCACCATCAAAGCATCATCCGATCAAATGATTGCAAACGCCGACG
CTCTTCGCTTCAAATATCAAGCTATACAAGGGATCGCGCAGGCCCTGGGC
GATGCGACATCACGAAACAAGGATACGACAGTGGCAAGCATATTCCTCCT
AGTATTTCTCGATCTTCTGGAGTCTGGAAGTGATCGATGGAATGTTCACC
TAGAAGGTGCCAAAAGATTGATGGAGCCAAGTACACCTGATTCGCAAGCT
GTTTCCAGACACGATTCCGGACAAACTATTGAGGATCTGCGTAATTTTCT
TGCCAGTCAGATTTACTCTCGCCCCATCAAAACCTTTGATTAGTATACCC
TCGACCATAGGCGATTTCGCCGCCTCTAACCTGGACGCAGTTTCCAGGTA
CTACTTGGATTATTATGGAGGAGCCGTGCTACACATGTCGGCGTCGGCGA
ATTCGCTGCGACCAGTCTCAGTCGCCTTGTGTAAAGTGCGCGACAAGTGG
CTATCAATGCTTTGCTTCTAGGCCTCTGAGATGGGTCGAAGGCCTAGCGA
TACGGGGGAAGCTGCGGGGTGTATCACTGGCAACCAACTCAGCTAGTTCA
GCTAAGAAGGCAAAGTCTCGGAAAGAGTCAGATTTGAGGGATAGTAGTCT
TGCACCGGCGACCGAGTCTGCTCTTTCTGTTGTGCGGTCCTCCGAAGGTC
ACGGATTGAGACCTTGGGTGGAACATTTGTACGCCCAAAGCTATTGTCAC
AGTTTAATTTGCTTGAGGGCCCTCAATTTCAGGAGACCGTCGAGCAGTCA
TTCCTTGGATGTCCGGAATACCTACTGGACGCTATACGGTATCTCTCTGC
GCGAAGAGACACCATTGCCAGCTCCGAATGCCATGATGACTCTACCTGGA
GCTACTTCATTCAGGATACCATGTCGATGATAGACTTCATCCAGCAATTC
GACTGTTCCGTATGGGCTTCGTCGCTACCATATCTGGGCACCGTCCCTCC
AAGAGGTACAAGCTCTCTTTGCACGTTGGCACAATCGTACAAGATAGGAG
CCCTAATTTACGGGAAACGTGTCCTTGGAGCTCTCACTAAGGAATATTTA
CCACTCGATGACCTGATACAGGAGTTGCTTGCCACGATTGAAAGTTTGCA
GAACAATGAGACTTTATACAAATGCATCCTCTGGCCTATAATCATTGCTG
GTCTTGAATGCCAACGACAAGAGCAAAGAGAGTCCGTGCGGACTTATATG
GAGAGTTTCTGGGAACACACCAAATGTGTGAATGTGATTAATGCTTCCAA
GATTATAGAAGACCGCTGGCAGCGATGCGACAGCACAGAACCTTCACACT
GGATATTCTCAATTGGTAATTTGGGCCGTGACTGGCTTTTGATCTGAATA
ATGAAAGCATATGTGGGCTCTTCATCGTTTACGATAGTGATAGGAACCCT
CTTAGGGCCCTCATGTCGCTCGCGCTGCTTGACCACACTCTCCTCAAGTC
TGTACTGGCTCTTGCAGCGCGACACAGGGTAAATAGACATTGTTCGTTCC
ATGACCTCACCATCAAAGCATCATCCGATCAAATGATTGCAAACGCCGAC
GCTCTTCGCTTCAAATATCAAGCTATACAAGGGATCGCGCAGGCCCTGGG
CGATGCGACATCACGAAACAAGGATACGACAGTGGCAAGCATATTCCTCC
TAGTATTTCTCGATCTTCTGGAGTCTGGAAGTGATCGATGGAATGTTCAC
CTAGAAGGTGCCAAAAGATTGATGGAGCCAAGTACACCTGATTCGCAAGC
TGTTTCCAGACACGATTCCGGACAAACTATTGAGGATCTGCGTAATTTTC
TTGCCAGTCAGATTTACTCTCGCCCCATCAAAACCTTTGATTAGTATACC
CTCGACCATAGGCGATTTCGCCGCCTCTAACCTGGACGCAGTTTCCAGGT
ACTACTTGGATTATTATGGAGGAGCCGTGCTACACATGTCGGCGTCGGCG
AATTCGCTGCGACCAGTCTCAGTCGCCTTGTGTAAAGTGCGCGACAAGTG
GCTATCAATGCTTTGCTTCTAGGCCTCTGAGATGGGTCGAAGGCCTAGCG
ATACGGGGGAAGCTGCGGGGTGTATCACTGGCAACCAACTCAGCTAGTTC
AGCTAAGAAGGCAAAGTCTCGGAAAGAGTCAGATTTGAGGGATAGTAGTC
TTGCACCGGCGACCGAGTCTGCTCTTTCTGTTGTGCGGTCCTCCGAAGGT
CACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2899656..2901375 - |
|
