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KJC3_008760-T1, KJC3_008760-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008760-T1
Unique NameKJC3_008760-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2933679..2934666+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008760-T1 ID=KJC3_008760-T1|Name=KJC3_008760-T1|organism=Aspergillus niger KJC3|type=mRNA|length=988bp|location=Sequence derived from alignment at ch6:2933679..2934666+ (Aspergillus niger KJC3)
TAAAAAGGCATCGATAACTAGGATTACTATTGGTATTCTAGTTATACACG
AATAACTTGCGCGTTGAAGATGTCGTACTATGATATAGATGCCATCTTGA
CAGATTCCCAAGTATGTGTTGTCAATCCTGGAAAATGAAAATGCATGCAT
GGCTGATTACCACCCAACCAGAAACTACCCTGCACATTTGAATTGGACGT
ACCTGGTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATGTACATCTTC
CTTCTGAATGGTTGGATGGGAGGTTTGCTAAGTGTAGTCTAACTAGATCA
AAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTTCT
ATCGGGTCAGTTATTTTACTTCCACTACTGATAATATCTTGGTGAGGTAT
CGTCTAACTATCGCAGTGCCCGACTGGGAACCTCTCGGCTAGTCACGCTG
GATCTCCCCTCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCTGA
TCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCTGA
GCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTTTG
AGTAATGTATGGTGCTTTTGTGAACTGGGGATGTGATTAATGTGGCTAAT
TGTGATGATGATAGACGTTCAAGAAGCGCTCAGCAGTCATTGCGGACCAT
GCGCATAATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGG
ATTGGATGAGACGGAGAGGCAGCGTATGTTGATCGCTCGTCTGTGTTGTG
TGTGTTGCTGATTACTGATGCCTTTGTGTAGTTTTCCGGGTTGCGCATGA
TAGTGCTAAGGAGACGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAT
GGTAATGGGTTACTGGTTTAGGTGGAGTGTATGGATTGTTGAAAGGTTGA
GCTGTGCTCGCCGTTATGAACATAAACTTTAACAGAAG
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Coding sequence (CDS) from alignment at ch6:2933679..2934666+

>KJC3_008760-T1 ID=KJC3_008760-T1|Name=KJC3_008760-T1|organism=Aspergillus niger KJC3|type=CDS|length=3222bp|location=Sequence derived from alignment at ch6:2933679..2934666+ (Aspergillus niger KJC3)
ATGTCGTACTATGATATAGATGCCATCTTGACAGATTCCCAAAAACTACC
CTGCACATTTGAATTGGACGTACCTGGTCTTGGTATTTTGGAGGGCAATC
CGGGGGAAAATATCAAAGCTGGAACGCGCATTGATTTGCCGTTATGGCTG
GGTGAGATGCTTTCTATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCAC
GCTGGATCTCCCCTCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAG
CTGATCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGT
CTGAGCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGT
TTTGAGTAATACGTTCAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGC
ATAATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTG
GATGAGACGGAGAGGCAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGA
GACGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAATGTCGTACTATG
ATATAGATGCCATCTTGACAGATTCCCAAAAACTACCCTGCACATTTGAA
TTGGACGTACCTGGTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATAT
CAAAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTT
CTATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCC
TCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGAC
GGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGA
TTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATACG
TTCAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGG
TGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGA
GGCAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGACGCGGGTCTGG
GCTGGAGAGGCGAAAAAGAAATGAATGTCGTACTATGATATAGATGCCAT
CTTGACAGATTCCCAAAAACTACCCTGCACATTTGAATTGGACGTACCTG
GTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATATCAAAGCTGGAACG
CGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTTCTATCGGTGCCCG
ACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCCTCAGCACTCTCAG
AACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGACGGTGGATCTGCGG
TCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGATTCTGGAGCTGTT
TGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATACGTTCAAGAAGCGCT
CAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGGTGCTTTAGGGCAG
GGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGAGGCAGCTTTTCCG
GGTTGCGCATGATAGTGCTAAGGAGACGCGGGTCTGGGCTGGAGAGGCGA
AAAAGAAATGAATGTCGTACTATGATATAGATGCCATCTTGACAGATTCC
CAAAAACTACCCTGCACATTTGAATTGGACGTACCTGGTCTTGGTATTTT
GGAGGGCAATCCGGGGGAAAATATCAAAGCTGGAACGCGCATTGATTTGC
CGTTATGGCTGGGTGAGATGCTTTCTATCGGTGCCCGACTGGGAACCTCT
CGGCTAGTCACGCTGGATCTCCCCTCAGCACTCTCAGAACGAGTCATGAA
TGCCTTGAAAGCTGATCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGC
ATTTTTATAGTCTGAGCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAA
TTGGTGGAGGTTTTGAGTAATACGTTCAAGAAGCGCTCAGCAGTCATTGC
GGACCATGCGCATAATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCT
TGCGAGGATTGGATGAGACGGAGAGGCAGCTTTTCCGGGTTGCGCATGAT
AGTGCTAAGGAGACGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAAT
GTCGTACTATGATATAGATGCCATCTTGACAGATTCCCAAAAACTACCCT
GCACATTTGAATTGGACGTACCTGGTCTTGGTATTTTGGAGGGCAATCCG
GGGGAAAATATCAAAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGG
TGAGATGCTTTCTATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCACGC
TGGATCTCCCCTCAGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCT
GATCCTCGGACGGTGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCT
GAGCGAGAGGATTCTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTT
TGAGTAATACGTTCAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCAT
AATCCGCAGGGTGCTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGA
TGAGACGGAGAGGCAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGA
CGCGGGTCTGGGCTGGAGAGGCGAAAAAGAAATGAATGTCGTACTATGAT
ATAGATGCCATCTTGACAGATTCCCAAAAACTACCCTGCACATTTGAATT
GGACGTACCTGGTCTTGGTATTTTGGAGGGCAATCCGGGGGAAAATATCA
AAGCTGGAACGCGCATTGATTTGCCGTTATGGCTGGGTGAGATGCTTTCT
ATCGGTGCCCGACTGGGAACCTCTCGGCTAGTCACGCTGGATCTCCCCTC
AGCACTCTCAGAACGAGTCATGAATGCCTTGAAAGCTGATCCTCGGACGG
TGGATCTGCGGTCATTGGCGCCGCATTTTTATAGTCTGAGCGAGAGGATT
CTGGAGCTGTTTGAGGAAGAGGAATTGGTGGAGGTTTTGAGTAATACGTT
CAAGAAGCGCTCAGCAGTCATTGCGGACCATGCGCATAATCCGCAGGGTG
CTTTAGGGCAGGGAGCGGATTTCTTGCGAGGATTGGATGAGACGGAGAGG
CAGCTTTTCCGGGTTGCGCATGATAGTGCTAAGGAGACGCGGGTCTGGGC
TGGAGAGGCGAAAAAGAAATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF3KJC3_008760Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008760-T1KJC3_008760-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008760-T1.utr5p1KJC3_008760-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008760-T1.exon1KJC3_008760-T1.exon1Aspergillus niger KJC3exon
KJC3_008760-T1.exon2KJC3_008760-T1.exon2Aspergillus niger KJC3exon
KJC3_008760-T1.exon3KJC3_008760-T1.exon3Aspergillus niger KJC3exon
KJC3_008760-T1.exon4KJC3_008760-T1.exon4Aspergillus niger KJC3exon
KJC3_008760-T1.exon5KJC3_008760-T1.exon5Aspergillus niger KJC3exon
KJC3_008760-T1.exon6KJC3_008760-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008760-T1.cdsKJC3_008760-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008760-T1.utr3p1KJC3_008760-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264O2D
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR038437
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
ProductDNA replication protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2933679..2934666 +
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