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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2999009..3000630- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008776-T1 ID=KJC3_008776-T1|Name=KJC3_008776-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1622bp|location=Sequence derived from alignment at ch6:2999009..3000630- (Aspergillus niger KJC3)
CAAAGAGTGCTCCTGCTGTGACGTAAGCCAATCGGAGGTCCGGCAGCAGC
CGACAGCCGCATCACGTCGGCGTGGCTTTCCGTCCTTGGCAAGGCGGCGA
TTGATAAGATCTGGCGGTTCGCAAAAAGTCCGAATGAAAGAAAAGAAACA
TTTCCCTCCCTATTTCCTATTCACCCTTCCTCCTCCTCCTCCTCCTTCTT
CTTTTTCCTCACATTCCCGATCCATTCACTCACAATGCAATCCATCCTCC
AACGAGGCCGCTCATTCTTCACCCCGACCCCCTCGGCCACCCCGCAGGAT
AGTCCCAAAGACAGCCCCAAACCCGAGGAGGATAATGATGCAGCACCCTC
GGCCGACACGCTTTTCCTAAAGACCGACCCCGCCGTGGACGGCGAGGAAT
GTCTGCACGACTGTGCGTCGTGCACGGTGAAATACCCTGCTAAATTCGAT
GTCGACCAGGAGGACAACATGTATGGGAATATCAATGGCTGGTCGACGCA
CGTGCTGGTTGCGACCGGGAAGTCGGATTGGGTGAGGGATGTTGCGGATG
AAGAGGGTAGTGTGATGGAGGCTATTGAGAAGGGGGGACTGGTGCCTAGT
AATGGGGTATGAAGACACCGTCACAGTTGCAGTTTGTTGAGGCTGCGCGA
TAAAAGTAAGAATTGTGAGGAAGGAAGCTAATCGGGTGGTTGTGTGTTGC
TTTAGAAACTGAAATTATCCGCCTCCAATATGCCCGTCCCGGACGAGTAT
CATTATCATGATGCGGGCAAGCAGCCTACGACTGTGTTGCTTCTGCCCAG
GTTTACCATTGTTGATCATGTTACGCCGCAGCTGGCGCCGGATTTGATCA
AGTATTTTGTTAATCGGTCGCCGACGACTACTACCCCTCTAGGCGGTGCT
GTATCTGAGTCTGCGGCCACTGGAAACAACAATGAGGATGAGCAACAGCA
ACAACAACCCTCAATCGAAGAACAACAGGAAGAAGAAAACATCGACATTC
ACACTCTCACCACCCTCCGCTCCCGCCCCTCCCCTCACTCTGCCGTTATT
CTGCTCTGTTCGCACCGCACCCGCGACGCCCGCTGCGGGCAGTCCGCGCC
ACTCCTCCGCAAGGAGTTCGAGCGCCATTTGCGCCATCTAGGCTTGTATC
GGGATATGGATGATGAGAGGCCTGGTGGTGTGGGGATTTACTTTATCAAT
CATGTTGGTGGGCATAAGTATGCGGCGAATGTGATTATTTATCGAAGGAG
GGACTTTGAGTGGTATAAGAAGACGGAGGAGGGAGCTGGAGAGACAGAGG
AAGAGGGCGCGGCGCAGGGCATCTGGCTTGCGAGGGTGAGGCCGCAGGAT
TGTGAGAATATTGTAAGGTATACGGTGTTGCAGGGGAAGGTGGTTAAGCC
GGGAGAGCAGTTGAGGGGTGGGTTTGATAGGGAGAGGGGGGTAACGAGTT
GGTAGGATTCATTCTTTGTTGCTTGGGAACTGGGTGGTATACGCATATAA
GATGTTGATGATGATGATGACAGGGGGTAATGTTTGTATAGCAATGAGTT
ACATAGAATGGGTATGGGTATATAGGTATATACAAGGAACCAATGAACAT
GCATGGGATCACAGCTGCTTAC back to topCoding sequence (CDS) from alignment at ch6:2999009..3000630- >KJC3_008776-T1 ID=KJC3_008776-T1|Name=KJC3_008776-T1|organism=Aspergillus niger KJC3|type=CDS|length=2244bp|location=Sequence derived from alignment at ch6:2999009..3000630- (Aspergillus niger KJC3)
AAACTGAAATTATCCGCCTCCAATATGCCCGTCCCGGACGAGTATCATTA
TCATGATGCGGGCAAGCAGCCTACGACTGTGTTGCTTCTGCCCAGGTTTA
CCATTGTTGATCATGTTACGCCGCAGCTGGCGCCGGATTTGATCAAGTAT
TTTGTTAATCGGTCGCCGACGACTACTACCCCTCTAGGCGGTGCTGTATC
TGAGTCTGCGGCCACTGGAAACAACAATGAGGATGAGCAACAGCAACAAC
AACCCTCAATCGAAGAACAACAGGAAGAAGAAAACATCGACATTCACACT
CTCACCACCCTCCGCTCCCGCCCCTCCCCTCACTCTGCCGTTATTCTGCT
CTGTTCGCACCGCACCCGCGACGCCCGCTGCGGGCAGTCCGCGCCACTCC
TCCGCAAGGAGTTCGAGCGCCATTTGCGCCATCTAGGCTTGTATCGGGAT
ATGGATGATGAGAGGCCTGGTGGTGTGGGGATTTACTTTATCAATCATGT
TGGTGGGCATAAGTATGCGGCGAATGTGATTATTTATCGAAGGAGGGACT
TTGAGTGGTATAAGAAGACGGAGGAGGGAGCTGGAGAGACAGAGGAAGAG
GGCGCGGCGCAGGGCATCTGGCTTGCGAGGGTGAGGCCGCAGGATTGTGA
GAATATTGTAAGGTATACGGTGTTGCAGGGGAAGGTGGTTAAGCCGGGAG
AGCAGTTGAGGGGTGGGTTTGATAGGGAGAGGGGGGTAACGAGTTGGTAG
ATGCAATCCATCCTCCAACGAGGCCGCTCATTCTTCACCCCGACCCCCTC
GGCCACCCCGCAGGATAGTCCCAAAGACAGCCCCAAACCCGAGGAGGATA
ATGATGCAGCACCCTCGGCCGACACGCTTTTCCTAAAGACCGACCCCGCC
GTGGACGGCGAGGAATGTCTGCACGACTGTGCGTCGTGCACGGTGAAATA
CCCTGCTAAATTCGATGTCGACCAGGAGGACAACATGTATGGGAATATCA
ATGGCTGGTCGACGCACGTGCTGGTTGCGACCGGGAAGTCGGATTGGGTG
AGGGATGTTGCGGATGAAGAGGGTAGTGTGATGGAGGCTATTGAGAAGGG
GGGACTGGTGCCTAGTAATGGGAAACTGAAATTATCCGCCTCCAATATGC
CCGTCCCGGACGAGTATCATTATCATGATGCGGGCAAGCAGCCTACGACT
GTGTTGCTTCTGCCCAGGTTTACCATTGTTGATCATGTTACGCCGCAGCT
GGCGCCGGATTTGATCAAGTATTTTGTTAATCGGTCGCCGACGACTACTA
CCCCTCTAGGCGGTGCTGTATCTGAGTCTGCGGCCACTGGAAACAACAAT
GAGGATGAGCAACAGCAACAACAACCCTCAATCGAAGAACAACAGGAAGA
AGAAAACATCGACATTCACACTCTCACCACCCTCCGCTCCCGCCCCTCCC
CTCACTCTGCCGTTATTCTGCTCTGTTCGCACCGCACCCGCGACGCCCGC
TGCGGGCAGTCCGCGCCACTCCTCCGCAAGGAGTTCGAGCGCCATTTGCG
CCATCTAGGCTTGTATCGGGATATGGATGATGAGAGGCCTGGTGGTGTGG
GGATTTACTTTATCAATCATGTTGGTGGGCATAAGTATGCGGCGAATGTG
ATTATTTATCGAAGGAGGGACTTTGAGTGGTATAAGAAGACGGAGGAGGG
AGCTGGAGAGACAGAGGAAGAGGGCGCGGCGCAGGGCATCTGGCTTGCGA
GGGTGAGGCCGCAGGATTGTGAGAATATTGTAAGGTATACGGTGTTGCAG
GGGAAGGTGGTTAAGCCGGGAGAGCAGTTGAGGGGTGGGTTTGATAGGGA
GAGGGGGGTAACGAGTTGGTAGATGCAATCCATCCTCCAACGAGGCCGCT
CATTCTTCACCCCGACCCCCTCGGCCACCCCGCAGGATAGTCCCAAAGAC
AGCCCCAAACCCGAGGAGGATAATGATGCAGCACCCTCGGCCGACACGCT
TTTCCTAAAGACCGACCCCGCCGTGGACGGCGAGGAATGTCTGCACGACT
GTGCGTCGTGCACGGTGAAATACCCTGCTAAATTCGATGTCGACCAGGAG
GACAACATGTATGGGAATATCAATGGCTGGTCGACGCACGTGCTGGTTGC
GACCGGGAAGTCGGATTGGGTGAGGGATGTTGCGGATGAAGAGGGTAGTG
TGATGGAGGCTATTGAGAAGGGGGGACTGGTGCCTAGTAATGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008776-T1.utr3p1 | KJC3_008776-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008776-T1.utr5p1 | KJC3_008776-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009737 |
| DBxref | InterPro:IPR036249 |
| DBxref | PFAM:PF06999 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2999009..3000630 - |
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