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KJC3_008781-T1, KJC3_008781-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008781-T1
Unique NameKJC3_008781-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3017117..3018837-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008781-T1 ID=KJC3_008781-T1|Name=KJC3_008781-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1721bp|location=Sequence derived from alignment at ch6:3017117..3018837- (Aspergillus niger KJC3)
TCATATTCCTGTCGATGTGAGCCTAATACACAAAGCAACCCGCTTGTATG
GAAATCATGGATACGCAGTGTCAGAACGCCCCAATCGCTCAACATGGCTC
GTCCGACGAAGATGATGAAGTCTCGGCAACGGAGGTGGAACCTTTGGGAG
AAGCTACACCACTAGGCAAAGCGACCTTGTCAGAATCTGTGATGAGCGAG
GAGAGCTCCATCTTCAACGCCCTAAGGACAGACTCTGGCACTGAAGACCT
CGGCTCGAAGTTTGGCTCAGCATGTCAATCTCGTGGCAACTTGGATAGCA
GAATCGTTGCCAATATGGCCATGTTTGTGCCCCTTGCGCCAGAAGCAACG
GTTCCTTCCCAGCGGGCGAACCGTGAGCCAAAATACTGCCCAGAACAAAA
CACTCAGCCCCCTGGCTGGCATCCTCAGTTATCCTTGGACAACCGTGTGC
TATCTACAGATGAAGGGAAGGCGGTTGTAGCCTCACCTCCAGACGAATCG
TTGAAGCAGAACCTTCTCGACGCGTTGCACCTCAGGAAGGCAGTTAGTCT
CAACGATGCAGATGATACTTCGAGAACGTTCAAGTGGCCCGGTAGTCTTG
ACTCGCCGGTCAGCCCTGCACTTCCCACTTATCCTCCACCAGTAAGAGCG
CCCACGCCCCCTGGGCTTCCTTCATTCGGGACTCGAGAAGCTGTCTACTA
CACTGCCCAGTTCCCCGTTCGCTCTGCCACCACCAGTGGGCGAGCGCAGC
AGTCCAGTACAAGCCCGCCTAGGCGTGCGGGCAGGCGTGTTGCTGATGGC
TCTAGAACTGCATCCTACGGGGGGATGCTACGGCGGCTACTCAGCTTCTC
ATCGTCTCCCCCGCCACAGCCTAGGCGACAGACATATACCGTGGCAAGAG
CCGAAGATGGTACTGCGGTTCAAGGCCGCTTCCCTTATAGACAGAGTGGT
CATGGGATGAATTTGGCTAGGCGATTGGAAGACCATCCATTTCACCGAAC
TGCCATTTCAGCTACTTGCGAAGATGGTTTAGAGATTGATAGCAGTGCTA
CACAAGACGGACAAATCAACAGAGGGCTCCCAGACATGAAACAGGATCAG
GCCGACAGCATTGATTCTGTAAACACAGGCACGGGCAGTCGCATGCGAAG
ACATCGCCCGCAGATAGGCCTAAATAGCTTACTACCGTTGCCTCACCCAG
TTCTCGCAAACCCTCTCCAACGGCCGGCCTCGGCAAATGGTTCTCTTCCT
ACATGTAGGGTTGACTCATTTTACACCTGTGCTTCTCGCTCGCAGATGCC
TGGCACACCCAGGCACATGGAAAGTCTCGATGCCCAAGGCACTGAGATCG
TGGGAGATTCTGCGGCATGCTACCTTGCGCCCACGGAGTCACCACCCGTC
TTTACGGCACAGGAAGAAAGTGAGTCCACCAACATTAACTCGGGTCCTTG
GCTACGATCGCTGCGTGGCGTCAATTTTTGGTTGTCCTGCTGTATGGGGG
CTCGTGATGAGCAGAACGCCGCCATTCACTCCAATACGACTTCCAATGAC
ACATACGCCACTGCGAGGAGCCACCTTTCATCTAATGCAGCTGAACACTC
GCACCCCAATGCCCCTCGAGATCACGCACAGAGCCTACAAAAGTGGTTTT
CTGGAGCTTGGAGGTCGCTCCAAACGTTTCCTTTTCGCAACTCTCCAGCC
ACAAGCCCGATGTCGGCCTGA
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Coding sequence (CDS) from alignment at ch6:3017117..3018837-

>KJC3_008781-T1 ID=KJC3_008781-T1|Name=KJC3_008781-T1|organism=Aspergillus niger KJC3|type=CDS|length=1674bp|location=Sequence derived from alignment at ch6:3017117..3018837- (Aspergillus niger KJC3)
ATGGAAATCATGGATACGCAGTGTCAGAACGCCCCAATCGCTCAACATGG
CTCGTCCGACGAAGATGATGAAGTCTCGGCAACGGAGGTGGAACCTTTGG
GAGAAGCTACACCACTAGGCAAAGCGACCTTGTCAGAATCTGTGATGAGC
GAGGAGAGCTCCATCTTCAACGCCCTAAGGACAGACTCTGGCACTGAAGA
CCTCGGCTCGAAGTTTGGCTCAGCATGTCAATCTCGTGGCAACTTGGATA
GCAGAATCGTTGCCAATATGGCCATGTTTGTGCCCCTTGCGCCAGAAGCA
ACGGTTCCTTCCCAGCGGGCGAACCGTGAGCCAAAATACTGCCCAGAACA
AAACACTCAGCCCCCTGGCTGGCATCCTCAGTTATCCTTGGACAACCGTG
TGCTATCTACAGATGAAGGGAAGGCGGTTGTAGCCTCACCTCCAGACGAA
TCGTTGAAGCAGAACCTTCTCGACGCGTTGCACCTCAGGAAGGCAGTTAG
TCTCAACGATGCAGATGATACTTCGAGAACGTTCAAGTGGCCCGGTAGTC
TTGACTCGCCGGTCAGCCCTGCACTTCCCACTTATCCTCCACCAGTAAGA
GCGCCCACGCCCCCTGGGCTTCCTTCATTCGGGACTCGAGAAGCTGTCTA
CTACACTGCCCAGTTCCCCGTTCGCTCTGCCACCACCAGTGGGCGAGCGC
AGCAGTCCAGTACAAGCCCGCCTAGGCGTGCGGGCAGGCGTGTTGCTGAT
GGCTCTAGAACTGCATCCTACGGGGGGATGCTACGGCGGCTACTCAGCTT
CTCATCGTCTCCCCCGCCACAGCCTAGGCGACAGACATATACCGTGGCAA
GAGCCGAAGATGGTACTGCGGTTCAAGGCCGCTTCCCTTATAGACAGAGT
GGTCATGGGATGAATTTGGCTAGGCGATTGGAAGACCATCCATTTCACCG
AACTGCCATTTCAGCTACTTGCGAAGATGGTTTAGAGATTGATAGCAGTG
CTACACAAGACGGACAAATCAACAGAGGGCTCCCAGACATGAAACAGGAT
CAGGCCGACAGCATTGATTCTGTAAACACAGGCACGGGCAGTCGCATGCG
AAGACATCGCCCGCAGATAGGCCTAAATAGCTTACTACCGTTGCCTCACC
CAGTTCTCGCAAACCCTCTCCAACGGCCGGCCTCGGCAAATGGTTCTCTT
CCTACATGTAGGGTTGACTCATTTTACACCTGTGCTTCTCGCTCGCAGAT
GCCTGGCACACCCAGGCACATGGAAAGTCTCGATGCCCAAGGCACTGAGA
TCGTGGGAGATTCTGCGGCATGCTACCTTGCGCCCACGGAGTCACCACCC
GTCTTTACGGCACAGGAAGAAAGTGAGTCCACCAACATTAACTCGGGTCC
TTGGCTACGATCGCTGCGTGGCGTCAATTTTTGGTTGTCCTGCTGTATGG
GGGCTCGTGATGAGCAGAACGCCGCCATTCACTCCAATACGACTTCCAAT
GACACATACGCCACTGCGAGGAGCCACCTTTCATCTAATGCAGCTGAACA
CTCGCACCCCAATGCCCCTCGAGATCACGCACAGAGCCTACAAAAGTGGT
TTTCTGGAGCTTGGAGGTCGCTCCAAACGTTTCCTTTTCGCAACTCTCCA
GCCACAAGCCCGATGTCGGCCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008781KJC3_008781Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008781-T1.cdsKJC3_008781-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008781-T1.exon1KJC3_008781-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008781-T1.utr5p1KJC3_008781-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008781-T1KJC3_008781-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3017117..3018837 -
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