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KJC3_008782-T1, KJC3_008782-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008782-T1
Unique NameKJC3_008782-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3019498..3021733+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008782-T1 ID=KJC3_008782-T1|Name=KJC3_008782-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2236bp|location=Sequence derived from alignment at ch6:3019498..3021733+ (Aspergillus niger KJC3)
CTTCTGGGATGGCTTGGTTGATCTGATATCGGGCGGAGGTGCGACTTCTT
CCCCCACCGCATGTGTCGATTTGGTCGCGTTGACTATGGTTGTTGCAATG
GGAAGTTTGGCTAAAGCAAGATTCATCTCGCAGTTGACAAATGAAGAATG
TGCAATATCATGCAGCTCTCCGGCAATGCATTCACTTCAGCTGCCAACAA
TGACACCCCCTGACCAAGGTTGGGGTTCAGCCGAGGTCGGATCGTCGAGA
CCAGAACACGATGAAACCGGCCATCATGAGACAATTCGACCTCCTTCCCA
AAAATGAAGGAGCAGTGCAACCCAACCTCGGACCGCTTCACAAACCGTCT
TATCTATGGACGCCATCGTGTCTCGGCAAGAGGCTAGGATAATACTAAAG
CCACGGCGCGATCCGTTCGTTGGTTGCGGTGAAATTGATTTAATTACCTT
TCCCCTCATTTAATGCTCCGCTCCTCGCCAGCTGGTCACGCAACCCACCG
GCTGCTTGTTGTCTCTCATGGACTCCAGAGCACCCCAGGATTCAGCAGGT
ATGCACCATGGCTCTGCCACTGCAGCGCCAGCAGAGCTGCCTCCGTCGGG
CCCTGTCTACCAGGTCTACAAGCAGCGGTTCTGGGGATTGGCCCAGTTGG
TGCTGTTGAACATTGTTGTTAGTTGGGATGTAGGTTCTCTCTCTGCCGCC
TCTAAGAATGTGCACTCTTCTGATACCCGCCGTCGTCTAGTGGTTAACAT
TTTCCTCGATATCGACTACTGCGGCTGAGCATTTCCGCGTTTCTGAGAGC
GCCATCAATTGGATGAGCACCGGTTACCTCTTCGCTTTTTGTGTCGCCAG
CCCGTGAGTTTAGCCCTGAATATTTCCAATTGTCTGCGGTGCTTGGAAGC
GACTGGAATTCACGCTCATTCTTGCTCTCAGCGTAGTGATCTTCACTCTC
AATAAAGGTGGCCCTAAGCCCGCCATCATCACCACCTCAACCCTCCTCCT
CGTCGGCAACTGGATTCGATATGCAGGAACCAAAGCGAAAGGAGGCATCT
TCGGTGTTGCCATGTTCGGACAGATCCTCATCGGACTGGCGCAGCCATTC
TGTTTGAGCGCTCCGACGCGATACAGCGACCTCTGGTTCTCTGACCAGGG
CCGGACCAGCGCAACGGCCGTAGCCACCCTTGCCAATCCGTTGGGTGCAG
CATTGGGAGAGCTGATCGACTCTTTCTGGGCGACCAAGCCAAGCGAAGTC
CCGAACATGGTTCTGTATATCTCTGTCATCGTAAGCCTTCCTCAGATCCC
TCCACACATAGATAGACTAAAGCCAAGCCGGCCACAACCTGTCCCACTCA
CCAACTAACAACCCAAAAGGCAACGATAGCAGCACTCCCTTCATTTTTCA
TTCCCTCCAAGCCCCCAACGCCTCCAAGCGCTTCATCTGCGAGCACCAAC
GCCTCCGCACCTCTCCTCCCGGCCATAACCCAACTCCTCAGAACCCTCGA
GTTCTACCTGATCTTGATCCCTTTCTCCATATACGTTGGCTTCTTTAACA
GCATCTCCTCGCTGCTCAACCAAATCCTCGAACCCTACTCATACACCGAA
ACCGAAGCCGGCATTGCAGGAGGCCTTCTGATCATTGTTGGGCTCATAGC
CTCAGCCATCATCTCTCCCCTCACAGACCGCTATAAGCACTACCTCGCCA
CCATCCGCACACTTGTCCCTATCGTAGCAATCACCTACATTGCCCTGATA
TTTGCCCCGCCCAGCTCCGCCGGCATCGCACCATCGTATGTCGTGTGCTC
CCTCCTCGGAGCTTCCTCCTTCGCCCTCCTTCCTGTCGTTCTGGAGTACC
TGGTCGAAATCACGTATCCCTTCTCCCCGGAGATTGGAAGCACTATCTGC
TGGACGGGTGGGCAGTTGCTGGGCGCCATATTCATTCTAGTTCAGGATGC
ATTGAAGGCCGGAGAGGACGCTAACCCGCCGGCCAATATGCAGAACGCGT
TGATTTTCTCTGCTGTTGTGGCGGCTGTCGCGGCGCCGTGGCCGTTGTGT
ATTGGCTGTTTTGGACGCGATGTAAGGAGACGGAGATTGGATGTTGATCG
AGGCGTGGAGCTGGGCCAGGAGGAGGCGGGTGAGGAACAGGGCGATGAGG
AACGTAGAGCTGGAGCTGGAGAGGATGACAAGAAAGGATTCTTTGGGTTG
AGCGTGGCGTGGAGGAAGAGATCTGGAGATATGTGA
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Coding sequence (CDS) from alignment at ch6:3019498..3021733+

>KJC3_008782-T1 ID=KJC3_008782-T1|Name=KJC3_008782-T1|organism=Aspergillus niger KJC3|type=CDS|length=2172bp|location=Sequence derived from alignment at ch6:3019498..3021733+ (Aspergillus niger KJC3)
ATGTTCGGACAGATCCTCATCGGACTGGCGCAGCCATTCTGTTTGAGCGC
TCCGACGCGATACAGCGACCTCTGGTTCTCTGACCAGGGCCGGACCAGCG
CAACGGCCGTAGCCACCCTTGCCAATCCGTTGGGTGCAGCATTGGGAGAG
CTGATCGACTCTTTCTGGGCGACCAAGCCAAGCGAAGTCCCGAACATGGT
TCTGTATATCTCTGTCATCGCAACGATAGCAGCACTCCCTTCATTTTTCA
TTCCCTCCAAGCCCCCAACGCCTCCAAGCGCTTCATCTGCGAGCACCAAC
GCCTCCGCACCTCTCCTCCCGGCCATAACCCAACTCCTCAGAACCCTCGA
GTTCTACCTGATCTTGATCCCTTTCTCCATATACGTTGGCTTCTTTAACA
GCATCTCCTCGCTGCTCAACCAAATCCTCGAACCCTACTCATACACCGAA
ACCGAAGCCGGCATTGCAGGAGGCCTTCTGATCATTGTTGGGCTCATAGC
CTCAGCCATCATCTCTCCCCTCACAGACCGCTATAAGCACTACCTCGCCA
CCATCCGCACACTTGTCCCTATCGTAGCAATCACCTACATTGCCCTGATA
TTTGCCCCGCCCAGCTCCGCCGGCATCGCACCATCGTATGTCGTGTGCTC
CCTCCTCGGAGCTTCCTCCTTCGCCCTCCTTCCTGTCGTTCTGGAGTACC
TGGTCGAAATCACGTATCCCTTCTCCCCGGAGATTGGAAGCACTATCTGC
TGGACGGGTGGGCAGTTGCTGGGCGCCATATTCATTCTAGTTCAGGATGC
ATTGAAGGCCGGAGAGGACGCTAACCCGCCGGCCAATATGCAGAACGCGT
TGATTTTCTCTGCTGTTGTGGCGGCTGTCGCGGCGCCGTGGCCGTTGTGT
ATTGGCTGTTTTGGACGCGATGTAAGGAGACGGAGATTGGATGTTGATCG
AGGCGTGGAGCTGGGCCAGGAGGAGGCGGGTGAGGAACAGGGCGATGAGG
AACGTAGAGCTGGAGCTGGAGAGGATGACAAGAAAGGATTCTTTGGGTTG
AGCGTGGCGTGGAGGAAGAGATCTGGAGATATGTGAATGTTCGGACAGAT
CCTCATCGGACTGGCGCAGCCATTCTGTTTGAGCGCTCCGACGCGATACA
GCGACCTCTGGTTCTCTGACCAGGGCCGGACCAGCGCAACGGCCGTAGCC
ACCCTTGCCAATCCGTTGGGTGCAGCATTGGGAGAGCTGATCGACTCTTT
CTGGGCGACCAAGCCAAGCGAAGTCCCGAACATGGTTCTGTATATCTCTG
TCATCGCAACGATAGCAGCACTCCCTTCATTTTTCATTCCCTCCAAGCCC
CCAACGCCTCCAAGCGCTTCATCTGCGAGCACCAACGCCTCCGCACCTCT
CCTCCCGGCCATAACCCAACTCCTCAGAACCCTCGAGTTCTACCTGATCT
TGATCCCTTTCTCCATATACGTTGGCTTCTTTAACAGCATCTCCTCGCTG
CTCAACCAAATCCTCGAACCCTACTCATACACCGAAACCGAAGCCGGCAT
TGCAGGAGGCCTTCTGATCATTGTTGGGCTCATAGCCTCAGCCATCATCT
CTCCCCTCACAGACCGCTATAAGCACTACCTCGCCACCATCCGCACACTT
GTCCCTATCGTAGCAATCACCTACATTGCCCTGATATTTGCCCCGCCCAG
CTCCGCCGGCATCGCACCATCGTATGTCGTGTGCTCCCTCCTCGGAGCTT
CCTCCTTCGCCCTCCTTCCTGTCGTTCTGGAGTACCTGGTCGAAATCACG
TATCCCTTCTCCCCGGAGATTGGAAGCACTATCTGCTGGACGGGTGGGCA
GTTGCTGGGCGCCATATTCATTCTAGTTCAGGATGCATTGAAGGCCGGAG
AGGACGCTAACCCGCCGGCCAATATGCAGAACGCGTTGATTTTCTCTGCT
GTTGTGGCGGCTGTCGCGGCGCCGTGGCCGTTGTGTATTGGCTGTTTTGG
ACGCGATGTAAGGAGACGGAGATTGGATGTTGATCGAGGCGTGGAGCTGG
GCCAGGAGGAGGCGGGTGAGGAACAGGGCGATGAGGAACGTAGAGCTGGA
GCTGGAGAGGATGACAAGAAAGGATTCTTTGGGTTGAGCGTGGCGTGGAG
GAAGAGATCTGGAGATATGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008782KJC3_008782Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008782-T1KJC3_008782-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008782-T1.utr5p1KJC3_008782-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_008782-T1.utr5p2KJC3_008782-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008782-T1.utr5p3KJC3_008782-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008782-T1.exon1KJC3_008782-T1.exon1Aspergillus niger KJC3exon
KJC3_008782-T1.exon2KJC3_008782-T1.exon2Aspergillus niger KJC3exon
KJC3_008782-T1.exon3KJC3_008782-T1.exon3Aspergillus niger KJC3exon
KJC3_008782-T1.exon4KJC3_008782-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008782-T1.cdsKJC3_008782-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3019498..3021733 +
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