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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3027422..3028844+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008785-T1 ID=KJC3_008785-T1|Name=KJC3_008785-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1423bp|location=Sequence derived from alignment at ch6:3027422..3028844+ (Aspergillus niger KJC3)
GGGTTTGAGGCTTTGGCAAGGGTGAGTCCGATGGAGTTCGGTTCATGGAT
AACTTTTGCCTTCCGCCAATATCAGCTGCTGACTTATACCGATGATTTAG
ATTCTCGAAGTCTGTTACAAGAGTGGCGTCAAAGTGGTTACAATCTACGC
CTTCAGCATCGAAAACTTCAAACGCTCCAAATTCGAGGTGGATGCATTGA
TGGAGATGGCCAGGGTGAAGTTGTCGCAGATGGCTCAGCACGGTGAGATT
CTGGATCGCTACGGGGCCAAGGTGCGGATATTGGGTCGGCTGGACTTGCT
CAGGCCGGATGTTCTTGCTGCAGTGAACCGGGCCGTCGAAATGACCAGTA
ACAACGGTGACTGCGTATTGAACATCTGTTTCCCGTACACATCGCGCGAT
GAGATTACCACGGCTGTTCGAGATACCGTGGCTGAGTACAGCCAGCCTCT
TCCGTCGACTCGTCCGTCGTCCATCTCCTCGAGGACGCCCTTCTCAGAAT
CCCACATTACACAAAACATCCGAGCACAGGCGCAGGTTTCGAAAGGAGAG
GAGGTACCGAGTGACTCGGAGGCGGCATCAGAGTCATCAGGAGACGGCGA
AACGACGAAGCACAAGACACCGAACGGAGTCTATGAAAATGGATCTTCGT
TCTCTTCCTCGTCGACTCTCCATCTCGCCGGTCAACAAGATGCTGCCAGT
GGGAAAGCCCCAGCAACGGAGCCCGCCGTCGGGAAAGAGAGTCTCGTCTT
TATGTCCCCCGAGACGATCACGCGTCAGACGTTGTCAGAACATCTATTCA
CCCATGACAATCCTCCTTTAGATCTGCTGGTCCGGACATCTGGAGTTGAG
CGCTTGAGTGACTTCATGCTTTGGCAATGCCACGAGGATACGGAGATCGT
CTTCCTTGATGTCCTGTGGCCGGACTTTGACCTTTGGCAGTTCCTGCCCG
TGATGCTGAGATGGCAGCGTCGAATCTCCAAGTCAAAGAAGAACCCGGAT
GCAGAGGGGAACTTCGACGGCGAAACATCTGACTCTGCGGAGGAAACTAA
TGGCAAGGTTAAAGATCTGTAGATGGTTGTGTTCCCTTAATTCTTTTCTC
TATTGTATACATGGACTGGGTTACCAGTCTGGCATCAATCATTGGGAGTT
TTGGAGTCATCCTTGGGAGCATCGACGAATATTCCCCCATTTGTCATCTA
GAATTTATGGCAGTGAGCTGAAAGGTGAAAAAAAGAGGGTTTCCATGAGC
TTATATAGATGCAGGCAGCGCACATAATTATATGGGACAGCATCTCCACC
TCGGGGAATCACGGATCATGTAAAATAATCAGATAAAATAGAGTGTCCGC
TATCGCAGCCTCCGATACCGCATCCGACCAAGTGGGCAGCCCCACGTGAC
TCACACTGGCGGGGGAATCGAAG back to topCoding sequence (CDS) from alignment at ch6:3027422..3028844+ >KJC3_008785-T1 ID=KJC3_008785-T1|Name=KJC3_008785-T1|organism=Aspergillus niger KJC3|type=CDS|length=873bp|location=Sequence derived from alignment at ch6:3027422..3028844+ (Aspergillus niger KJC3)
ATGGAGATGGCCAGGGTGAAGTTGTCGCAGATGGCTCAGCACGGTGAGAT
TCTGGATCGCTACGGGGCCAAGGTGCGGATATTGGGTCGGCTGGACTTGC
TCAGGCCGGATGTTCTTGCTGCAGTGAACCGGGCCGTCGAAATGACCAGT
AACAACGGTGACTGCGTATTGAACATCTGTTTCCCGTACACATCGCGCGA
TGAGATTACCACGGCTGTTCGAGATACCGTGGCTGAGTACAGCCAGCCTC
TTCCGTCGACTCGTCCGTCGTCCATCTCCTCGAGGACGCCCTTCTCAGAA
TCCCACATTACACAAAACATCCGAGCACAGGCGCAGGTTTCGAAAGGAGA
GGAGGTACCGAGTGACTCGGAGGCGGCATCAGAGTCATCAGGAGACGGCG
AAACGACGAAGCACAAGACACCGAACGGAGTCTATGAAAATGGATCTTCG
TTCTCTTCCTCGTCGACTCTCCATCTCGCCGGTCAACAAGATGCTGCCAG
TGGGAAAGCCCCAGCAACGGAGCCCGCCGTCGGGAAAGAGAGTCTCGTCT
TTATGTCCCCCGAGACGATCACGCGTCAGACGTTGTCAGAACATCTATTC
ACCCATGACAATCCTCCTTTAGATCTGCTGGTCCGGACATCTGGAGTTGA
GCGCTTGAGTGACTTCATGCTTTGGCAATGCCACGAGGATACGGAGATCG
TCTTCCTTGATGTCCTGTGGCCGGACTTTGACCTTTGGCAGTTCCTGCCC
GTGATGCTGAGATGGCAGCGTCGAATCTCCAAGTCAAAGAAGAACCCGGA
TGCAGAGGGGAACTTCGACGGCGAAACATCTGACTCTGCGGAGGAAACTA
ATGGCAAGGTTAAAGATCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008785-T1.utr5p1 | KJC3_008785-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008785-T1.utr3p1 | KJC3_008785-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018520 |
| DBxref | InterPro:IPR036424 |
| DBxref | InterPro:IPR001441 |
| DBxref | PFAM:PF01255 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3027422..3028844 + |
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