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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3054936..3056468- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008792-T1 ID=KJC3_008792-T1|Name=KJC3_008792-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1533bp|location=Sequence derived from alignment at ch6:3054936..3056468- (Aspergillus niger KJC3)
ATGAGCTCCTCTTTGAGCTCCCCAGCGACAAGTCGCCCGAGTCTCCTTAA
TCCCCGCCAGCCCATCAAGGCGTTGACGGTAGCTTTCTGTCTCTGGAAGG
CTCTAGTATATCTGGTCATCATCAGTTGCCCTGGCCTTGGCTACGACACT
TCCACAAGCCATCTCTACCATAGCCACAGTCGCCCTGATGTCACCTCAGA
AGACATCACTTATGCGCACCTTCCCATCCCGCTTAAGTTCGTCCGGTGGG
ATTCCGTTTACTTCTTGCATATCGCCGAAAATGGCTATATCTTTGAGCAA
GAGTGGGCGTTTGGCTACGGGTACACTAGAGTCCTTGCCTATATTGCCAC
TGGTAGATCTACCTGTCTTCCTCACCGAAGGTGTATCGCTGTGTTATTTG
AGCACTAATTGTGGATGTAGCATTGCAACGATTAATCGGCCCTAGTGGAG
CGGCCAGGACCGCTGTCGTGGCGACTGCTCTGTCTCATATTACCCATTAT
CTTGCCGTCTTAGCCTTGTATAGACTCTCCGTCAACGTATTTGGCCGTGA
CACGGCCACTCAAAGACTAATCTGCTTTCTTTCAGCAGTTCTGCACGTCA
TTTGCCCTGCAGGAGCATTTCTTTCTGCGCCGTATGGGGAGTCTTTGTTT
TCTTTCCTCAACATCACAGGTTTCTATGTCTACTCGTCCTCGTTTCTCGA
TAGCAAGGCGGGGAAGCGTCTATCCGGCGACGTGAAACTGCTGGTAGCTG
CGATCTTGTTCTCAGCAGCTACTGCAGTTCGTAGCAATGGAATCTTAAGC
GGTATTCTGTATGCTTATGATGCTCTTTTGCAGCTTCGGCGGGTTTGGTG
CCAAAGGTTATCAATTGACGCTTGTGCCCATCTCTCCGTTATTATCATCA
GTGGCTGTGTCATTGCCCTGGGACTTGTCGTTCCGCAAGTCGTGGCCTAT
TCCACATACTGTGTGGAGGACGATATTTCACGTCCGTGGTGTCAATGGCT
TGTCCCTAGTATCTATCGCCATGTTCAAGGACATTACTGGTACGTTGGGA
TGGCTGTCAAGCACCGCAAAACGCACTACTAAAATGAAATACAGGAATGT
AGGTTTCCTTCGGTATTGGACCGTCTCCAATATCCCACTCTTCATCCTGG
CAATGCCGATGCTGGCCATACTTTGCCGGTCGTCGCTATGGGCACTGGAT
GTGGCAGTGCCCTTTATCTTTCCGAGAGCCTTAAGCGGAGTGGACCAAGC
GTCGTCGTCAGCCACGACAGCCTCCCTTCTTCTCCGACTAGCTGTGCCGC
AAGGACTGCTTGCCCTGATGGCTCTGACCTCTTACCATGTTCAGATAATT
AATAGGATATCCTCAGGATATCCATTGTGGTACTGGTACCTCGTATATTT
GGTGTCGGGCAACTGGGGGCAAATGCGACCTTCCCTGCAAGACAGCCGCA
CCTTTACTGTGGCTGTGCGGGGCATGGTAGCCTATGCACTGATCCAGGCC
ATTCTGTTTGGGTCTTTCCTCCCGCCCGCGTGA back to topCoding sequence (CDS) from alignment at ch6:3054936..3056468- >KJC3_008792-T1 ID=KJC3_008792-T1|Name=KJC3_008792-T1|organism=Aspergillus niger KJC3|type=CDS|length=4230bp|location=Sequence derived from alignment at ch6:3054936..3056468- (Aspergillus niger KJC3)
GAATGTAGGTTTCCTTCGGTATTGGACCGTCTCCAATATCCCACTCTTCA
TCCTGGCAATGCCGATGCTGGCCATACTTTGCCGGTCGTCGCTATGGGCA
CTGGATGTGGCAGTGCCCTTTATCTTTCCGAGAGCCTTAAGCGGAGTGGA
CCAAGCGTCGTCGTCAGCCACGACAGCCTCCCTTCTTCTCCGACTAGCTG
TGCCGCAAGGACTGCTTGCCCTGATGGCTCTGACCTCTTACCATGTTCAG
ATAATTAATAGGATATCCTCAGGATATCCATTGTGGTACTGGTACCTCGT
ATATTTGGTGTCGGGCAACTGGGGGCAAATGCGACCTTCCCTGCAAGACA
GCCGCACCTTTACTGTGGCTGTGCGGGGCATGGTAGCCTATGCACTGATC
CAGGCCATTCTGTTTGGGTCTTTCCTCCCGCCCGCGTGACATTGCAACGA
TTAATCGGCCCTAGTGGAGCGGCCAGGACCGCTGTCGTGGCGACTGCTCT
GTCTCATATTACCCATTATCTTGCCGTCTTAGCCTTGTATAGACTCTCCG
TCAACGTATTTGGCCGTGACACGGCCACTCAAAGACTAATCTGCTTTCTT
TCAGCAGTTCTGCACGTCATTTGCCCTGCAGGAGCATTTCTTTCTGCGCC
GTATGGGGAGTCTTTGTTTTCTTTCCTCAACATCACAGGTTTCTATGTCT
ACTCGTCCTCGTTTCTCGATAGCAAGGCGGGGAAGCGTCTATCCGGCGAC
GTGAAACTGCTGGTAGCTGCGATCTTGTTCTCAGCAGCTACTGCAGTTCG
TAGCAATGGAATCTTAAGCGGTATTCTGTATGCTTATGATGCTCTTTTGC
AGCTTCGGCGGGTTTGGTGCCAAAGGTTATCAATTGACGCTTGTGCCCAT
CTCTCCGTTATTATCATCAGTGGCTGTGTCATTGCCCTGGGACTTGTCGT
TCCGCAAGTCGTGGCCTATTCCACATACTGTGTGGAGGACGATATTTCAC
GTCCGTGGTGTCAATGGCTTGTCCCTAGTATCTATCGCCATGTTCAAGGA
CATTACTGATGAGCTCCTCTTTGAGCTCCCCAGCGACAAGTCGCCCGAGT
CTCCTTAATCCCCGCCAGCCCATCAAGGCGTTGACGGTAGCTTTCTGTCT
CTGGAAGGCTCTAGTATATCTGGTCATCATCAGTTGCCCTGGCCTTGGCT
ACGACACTTCCACAAGCCATCTCTACCATAGCCACAGTCGCCCTGATGTC
ACCTCAGAAGACATCACTTATGCGCACCTTCCCATCCCGCTTAAGTTCGT
CCGGTGGGATTCCGTTTACTTCTTGCATATCGCCGAAAATGGCTATATCT
TTGAGCAAGAGTGGGCGTTTGGCTACGGGTACACTAGAGTCCTTGCCTAT
ATTGCCACTGGAATGTAGGTTTCCTTCGGTATTGGACCGTCTCCAATATC
CCACTCTTCATCCTGGCAATGCCGATGCTGGCCATACTTTGCCGGTCGTC
GCTATGGGCACTGGATGTGGCAGTGCCCTTTATCTTTCCGAGAGCCTTAA
GCGGAGTGGACCAAGCGTCGTCGTCAGCCACGACAGCCTCCCTTCTTCTC
CGACTAGCTGTGCCGCAAGGACTGCTTGCCCTGATGGCTCTGACCTCTTA
CCATGTTCAGATAATTAATAGGATATCCTCAGGATATCCATTGTGGTACT
GGTACCTCGTATATTTGGTGTCGGGCAACTGGGGGCAAATGCGACCTTCC
CTGCAAGACAGCCGCACCTTTACTGTGGCTGTGCGGGGCATGGTAGCCTA
TGCACTGATCCAGGCCATTCTGTTTGGGTCTTTCCTCCCGCCCGCGTGAC
ATTGCAACGATTAATCGGCCCTAGTGGAGCGGCCAGGACCGCTGTCGTGG
CGACTGCTCTGTCTCATATTACCCATTATCTTGCCGTCTTAGCCTTGTAT
AGACTCTCCGTCAACGTATTTGGCCGTGACACGGCCACTCAAAGACTAAT
CTGCTTTCTTTCAGCAGTTCTGCACGTCATTTGCCCTGCAGGAGCATTTC
TTTCTGCGCCGTATGGGGAGTCTTTGTTTTCTTTCCTCAACATCACAGGT
TTCTATGTCTACTCGTCCTCGTTTCTCGATAGCAAGGCGGGGAAGCGTCT
ATCCGGCGACGTGAAACTGCTGGTAGCTGCGATCTTGTTCTCAGCAGCTA
CTGCAGTTCGTAGCAATGGAATCTTAAGCGGTATTCTGTATGCTTATGAT
GCTCTTTTGCAGCTTCGGCGGGTTTGGTGCCAAAGGTTATCAATTGACGC
TTGTGCCCATCTCTCCGTTATTATCATCAGTGGCTGTGTCATTGCCCTGG
GACTTGTCGTTCCGCAAGTCGTGGCCTATTCCACATACTGTGTGGAGGAC
GATATTTCACGTCCGTGGTGTCAATGGCTTGTCCCTAGTATCTATCGCCA
TGTTCAAGGACATTACTGATGAGCTCCTCTTTGAGCTCCCCAGCGACAAG
TCGCCCGAGTCTCCTTAATCCCCGCCAGCCCATCAAGGCGTTGACGGTAG
CTTTCTGTCTCTGGAAGGCTCTAGTATATCTGGTCATCATCAGTTGCCCT
GGCCTTGGCTACGACACTTCCACAAGCCATCTCTACCATAGCCACAGTCG
CCCTGATGTCACCTCAGAAGACATCACTTATGCGCACCTTCCCATCCCGC
TTAAGTTCGTCCGGTGGGATTCCGTTTACTTCTTGCATATCGCCGAAAAT
GGCTATATCTTTGAGCAAGAGTGGGCGTTTGGCTACGGGTACACTAGAGT
CCTTGCCTATATTGCCACTGGAATGTAGGTTTCCTTCGGTATTGGACCGT
CTCCAATATCCCACTCTTCATCCTGGCAATGCCGATGCTGGCCATACTTT
GCCGGTCGTCGCTATGGGCACTGGATGTGGCAGTGCCCTTTATCTTTCCG
AGAGCCTTAAGCGGAGTGGACCAAGCGTCGTCGTCAGCCACGACAGCCTC
CCTTCTTCTCCGACTAGCTGTGCCGCAAGGACTGCTTGCCCTGATGGCTC
TGACCTCTTACCATGTTCAGATAATTAATAGGATATCCTCAGGATATCCA
TTGTGGTACTGGTACCTCGTATATTTGGTGTCGGGCAACTGGGGGCAAAT
GCGACCTTCCCTGCAAGACAGCCGCACCTTTACTGTGGCTGTGCGGGGCA
TGGTAGCCTATGCACTGATCCAGGCCATTCTGTTTGGGTCTTTCCTCCCG
CCCGCGTGACATTGCAACGATTAATCGGCCCTAGTGGAGCGGCCAGGACC
GCTGTCGTGGCGACTGCTCTGTCTCATATTACCCATTATCTTGCCGTCTT
AGCCTTGTATAGACTCTCCGTCAACGTATTTGGCCGTGACACGGCCACTC
AAAGACTAATCTGCTTTCTTTCAGCAGTTCTGCACGTCATTTGCCCTGCA
GGAGCATTTCTTTCTGCGCCGTATGGGGAGTCTTTGTTTTCTTTCCTCAA
CATCACAGGTTTCTATGTCTACTCGTCCTCGTTTCTCGATAGCAAGGCGG
GGAAGCGTCTATCCGGCGACGTGAAACTGCTGGTAGCTGCGATCTTGTTC
TCAGCAGCTACTGCAGTTCGTAGCAATGGAATCTTAAGCGGTATTCTGTA
TGCTTATGATGCTCTTTTGCAGCTTCGGCGGGTTTGGTGCCAAAGGTTAT
CAATTGACGCTTGTGCCCATCTCTCCGTTATTATCATCAGTGGCTGTGTC
ATTGCCCTGGGACTTGTCGTTCCGCAAGTCGTGGCCTATTCCACATACTG
TGTGGAGGACGATATTTCACGTCCGTGGTGTCAATGGCTTGTCCCTAGTA
TCTATCGCCATGTTCAAGGACATTACTGATGAGCTCCTCTTTGAGCTCCC
CAGCGACAAGTCGCCCGAGTCTCCTTAATCCCCGCCAGCCCATCAAGGCG
TTGACGGTAGCTTTCTGTCTCTGGAAGGCTCTAGTATATCTGGTCATCAT
CAGTTGCCCTGGCCTTGGCTACGACACTTCCACAAGCCATCTCTACCATA
GCCACAGTCGCCCTGATGTCACCTCAGAAGACATCACTTATGCGCACCTT
CCCATCCCGCTTAAGTTCGTCCGGTGGGATTCCGTTTACTTCTTGCATAT
CGCCGAAAATGGCTATATCTTTGAGCAAGAGTGGGCGTTTGGCTACGGGT
ACACTAGAGTCCTTGCCTATATTGCCACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006506 | GPI anchor biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000009 | alpha-1,6-mannosyltransferase activity |
| GO:0004376 | glycolipid mannosyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.16 |
| Note | BUSCO:EOG09262GLP |
| Note | CAZy:GT76 |
| DBxref | InterPro:IPR007315 |
| DBxref | PFAM:PF04188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3054936..3056468 - |
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