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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3083662..3087200- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008800-T1 ID=KJC3_008800-T1|Name=KJC3_008800-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3539bp|location=Sequence derived from alignment at ch6:3083662..3087200- (Aspergillus niger KJC3)
GTCACTCACACCAGATCTTCAAAAGAGTAGAGCCCGCAGCATCATTCAAT
GTCAAGATGTCTAAACAGCTCAGAAACACGGTTGCCTTCATCTGGTTTGC
TTGTGGGCGTTGGACATCACGTGCCCGTTCATTTCATCCAGAATCCAAAC
GGCCAACCCAACTTGGAACTTCTCTTCAACCGCCCTCCTTCTGTCGTCCA
TGAGGGGATATATTTAGAACCTCGACGTAAGTCAAAAATAAAAGATTAGC
TTCAAGTTTTGTCAAAATCTGCAGCTCTGAACCAGTCAAGTGTTCAATAA
TAGACGGATCTTCCCCTTCCTAGCAGCAACATGCAACGGGAAGCGCCGCC
AACCCCCAGGGCATCAAGCAAAGAGCCATTAGGATCAGGCTTCACTGTTT
GAAACTACCTAACCGCCTCTCCTGGTGCATCTTGCAATGTTGTGGGGTCT
AGTTGTGCTGGATCGCGGATTGGGCTACAGCGCCGTATCCTAAGCGCCGA
CACGGTACCTATATTTGGCTGGCCTGCAGAACTCTGAAGAACTCACCGGC
ATAGGCTCTACCTACAGACACTGCGCTAGATGAAACTTATCGTGCAGATC
GACCCGATCAGCTGCAGCCTTTGGCCTTATTATTTGCTATCCTTGTTGAC
GCTGGCCGCTCTTACTGGCTGCCGTTGGCCGTGTCTTCAACCTGTCTTTG
TCTCAGCTATTATTGACCTGGTCACAATGGAAGTCGGTCTGTTGACTCTC
TCGCCCATAATAAGGCGGGGATATCCTCCTTATTGTGACATTGCTATTGA
TTCTACTTCTTTCATCTATTGTTCTTAGGTGTTACTTTTTTTTTTGTTTC
TACCCCCACCGTACAGCTTTTTTTAAATCTATAGTTTGGTCATGCAGTAC
GGCTTCTCAACAATTGCATCCGGTTCATTTGAATAATTACTGCTGGTCAG
GATTGTTCTTTCTTTGACATCTCGTCTACCAACTTTCTATACCCTCTGTG
ATAGACCTCCTTTATTTGCACGATCCTCAACAGCTGGACTCACTTGGATT
TTACAAACTCATTCCTCCACAGAATCACTCCCTACACATATAGCGTATTT
TCGACATGTTGTTTTCAAAATCCGGTCAGACCATCTTTCCACTGCTACCA
CCCTATGGGGTTCAAGATCCCAACGGCGTTCAAGGTCGAGTCATCCCTGT
ACACCCTGATGGCTCGACACCTTACCTAGGCCTGCGGGCGCGCCTTTCCC
AAGTATGGCTTAACCGCTGGACCGTTTTGCTGCTGCTAGTCCTTGCCCGA
GTGCTGATGGCTGCCTCGAGCATAAAAACGGACATGAATCGAGCCAAAAG
CGAGGCCCTTTCGGCATGCACAAGCGTGGAATCTATGGGCGATGCCATGG
TCTCTATGCCCCATTACCTGGCGGAAGGGGTCAATGAGCTCACAGCAGAT
GGTGTCAATGCGGCAATTGATGGCCTAAAAATGCTCCTCATGCTTACCTT
GACTGGCGTAGAGGAGTTGGTGATTTTCTTCGTCAAAGTGATGTACCAGA
CATATCTGTGCTTGTTCACGCTCGTCGTACATGGTGTGGTTGATGTTGGA
CTCAGCTTAATCGAAGATGTAACAGACGTTCTGAATTCCACGGTCAAGAC
TGTGGCGAAGGATATTGCTAAGGTCACCGAGACGTTTGAGGACGACTACA
ATACTCTGATATCGAAGATAAACGGGGTTGCCAGCTTATTCGGAGGATCA
GTTCCGACCCTGAATATCAGCAGCGAAATCGACAAACTGGAGAATGTACA
GCTGTCTTCGTCCATCGATAAGGATCTCCAGAAGATTAACGACTCCATCC
CAAATTTCAACGAAGTCATGAACTTCACTGAGAATGTGATTCGTTTTCCC
TTCGATGAAGTCAAAAAACTGGTCAACGAGTCACTAGGCAATTACACTTT
TAATGCCTCCGCACTCCCTGTCCCTGCGAAGAAGACACTGACGTTTTGCG
ATAAAAACGATGGGATCAACTCATTTTTTGCCGGAGCAACTGATATAATC
CTAACCGCCCGCAAGATATTTATCGCCATTTTGGTCGTCGCTGCCATCAT
CGCTTGCGTTCCCATGGCCTGGCAGGAGATTCGGCGCTGGCACACGATGA
AGGAGCGCTCCCAACTTGTTCGCAAGGAAGCTCATGATCCCATGGACGTC
GTTTACATAGTCTCCAGACCTCACACGGCCGCAATAGGTATCAAAGCCGC
CAGTCGATTCAGCAACAGCCGCAGACAGATTCTTGTGCGCTGGGTGATCG
CATATGCGACCTCCCCCGCAGCCTTATTCGTCCTCCTTCTCGCACTGGCT
GGGCTTCTCTCATGCCTCTGCCAGTTCATCCTTCTCAGCGCCGTCAAGAG
GACAGTGCCGGAGCTCTCCAACGAAGTAGGCGACTTTGCCGAAGAGGTTG
TTGATGTCTTACAAAATACATCTGCTCAATGGGCCAACGATGCCAACAAA
GTCATCCAAAACGTTGACGATGAGCTCAACGATCACGTGTTTGGTTGGGT
CAACACCAGCACCGGCGCTTTGAATGACACGCTGAATACCTTTGTCAACA
AAACAATCGGGGTCCTCAACGACACCTTTGGTGGAACCCTACTCTATGAA
CCTCTTCTCGACGTCTTTGACTGCTTGGTTGGCCTCAAAGTTGAAAGCGT
CCAGAAAGGCCTTACTTGGGTTTCCGATCATGCCCACATAGACTTCCCCC
TCCTCCCCAACGACACCTTTTCGCGCGGTGCAGAAGGGAGTCTCAACAGT
TCCGATGCATCAGAGAGCTTCCTCGCCGACGCCGGTGACGAGACATCCAA
CAAGATCACCGAAGTTGTGTACAAGGTCATCAGCGCTCTCGAGAAGGCTC
TCCTAATAGAAGTCATCATTGCTTCATGCATCCTTCTGGTCTGGGTCATA
AATGCCATGTTTGGCATCATCCGCGCCCTAACACTCTTCTGGGGCCGGGA
CAAGAACCGTGGTGAGGGCGGACCTGCTCCTCCCAATTCACGACCGAACC
CAGGCTCTGGACCGGACTCGCATGGTTTCATCGATGTGCCCCTAACTTCT
CTTCCGAGTCACCGTGACGCCGATGAGACTGCTGCGCGCTCGCAGCCGGC
ACCCCGATATGAAGTTGCGACCAGCCAGGGAAGTTCTGCCGCCGTGGTGA
GCAGCGAATTGGAGTATCCGGACGAGAAAGTCGGGTTCGCAGGCCAGCGC
AATGCTCTTCGAGTGGATGGGGTGTCGGATCTACGCGGGAGCAGCTATGT
GGAGTATGGAATAGAGAAGTATTGATCTGCTGGCCTATTCCCTATTCATG
GTGATTTCGAACTCGCCGTCCTACCAACTTTTTGTTTCTTAGCCAGCTCG
TACTCCCTCGCACTTTCCTTGAGCGTCTACCATATACCCATAGACCATAA
TTCTAACTCAATACACTCTTTAATCCAGCCCGTACAATATCTAGAATCAT
CTCAGGTCAGTCCATGCGCTGTATACCATACCAGGAACG back to topCoding sequence (CDS) from alignment at ch6:3083662..3087200- >KJC3_008800-T1 ID=KJC3_008800-T1|Name=KJC3_008800-T1|organism=Aspergillus niger KJC3|type=CDS|length=2220bp|location=Sequence derived from alignment at ch6:3083662..3087200- (Aspergillus niger KJC3)
ATGTTGTTTTCAAAATCCGGTCAGACCATCTTTCCACTGCTACCACCCTA
TGGGGTTCAAGATCCCAACGGCGTTCAAGGTCGAGTCATCCCTGTACACC
CTGATGGCTCGACACCTTACCTAGGCCTGCGGGCGCGCCTTTCCCAAGTA
TGGCTTAACCGCTGGACCGTTTTGCTGCTGCTAGTCCTTGCCCGAGTGCT
GATGGCTGCCTCGAGCATAAAAACGGACATGAATCGAGCCAAAAGCGAGG
CCCTTTCGGCATGCACAAGCGTGGAATCTATGGGCGATGCCATGGTCTCT
ATGCCCCATTACCTGGCGGAAGGGGTCAATGAGCTCACAGCAGATGGTGT
CAATGCGGCAATTGATGGCCTAAAAATGCTCCTCATGCTTACCTTGACTG
GCGTAGAGGAGTTGGTGATTTTCTTCGTCAAAGTGATGTACCAGACATAT
CTGTGCTTGTTCACGCTCGTCGTACATGGTGTGGTTGATGTTGGACTCAG
CTTAATCGAAGATGTAACAGACGTTCTGAATTCCACGGTCAAGACTGTGG
CGAAGGATATTGCTAAGGTCACCGAGACGTTTGAGGACGACTACAATACT
CTGATATCGAAGATAAACGGGGTTGCCAGCTTATTCGGAGGATCAGTTCC
GACCCTGAATATCAGCAGCGAAATCGACAAACTGGAGAATGTACAGCTGT
CTTCGTCCATCGATAAGGATCTCCAGAAGATTAACGACTCCATCCCAAAT
TTCAACGAAGTCATGAACTTCACTGAGAATGTGATTCGTTTTCCCTTCGA
TGAAGTCAAAAAACTGGTCAACGAGTCACTAGGCAATTACACTTTTAATG
CCTCCGCACTCCCTGTCCCTGCGAAGAAGACACTGACGTTTTGCGATAAA
AACGATGGGATCAACTCATTTTTTGCCGGAGCAACTGATATAATCCTAAC
CGCCCGCAAGATATTTATCGCCATTTTGGTCGTCGCTGCCATCATCGCTT
GCGTTCCCATGGCCTGGCAGGAGATTCGGCGCTGGCACACGATGAAGGAG
CGCTCCCAACTTGTTCGCAAGGAAGCTCATGATCCCATGGACGTCGTTTA
CATAGTCTCCAGACCTCACACGGCCGCAATAGGTATCAAAGCCGCCAGTC
GATTCAGCAACAGCCGCAGACAGATTCTTGTGCGCTGGGTGATCGCATAT
GCGACCTCCCCCGCAGCCTTATTCGTCCTCCTTCTCGCACTGGCTGGGCT
TCTCTCATGCCTCTGCCAGTTCATCCTTCTCAGCGCCGTCAAGAGGACAG
TGCCGGAGCTCTCCAACGAAGTAGGCGACTTTGCCGAAGAGGTTGTTGAT
GTCTTACAAAATACATCTGCTCAATGGGCCAACGATGCCAACAAAGTCAT
CCAAAACGTTGACGATGAGCTCAACGATCACGTGTTTGGTTGGGTCAACA
CCAGCACCGGCGCTTTGAATGACACGCTGAATACCTTTGTCAACAAAACA
ATCGGGGTCCTCAACGACACCTTTGGTGGAACCCTACTCTATGAACCTCT
TCTCGACGTCTTTGACTGCTTGGTTGGCCTCAAAGTTGAAAGCGTCCAGA
AAGGCCTTACTTGGGTTTCCGATCATGCCCACATAGACTTCCCCCTCCTC
CCCAACGACACCTTTTCGCGCGGTGCAGAAGGGAGTCTCAACAGTTCCGA
TGCATCAGAGAGCTTCCTCGCCGACGCCGGTGACGAGACATCCAACAAGA
TCACCGAAGTTGTGTACAAGGTCATCAGCGCTCTCGAGAAGGCTCTCCTA
ATAGAAGTCATCATTGCTTCATGCATCCTTCTGGTCTGGGTCATAAATGC
CATGTTTGGCATCATCCGCGCCCTAACACTCTTCTGGGGCCGGGACAAGA
ACCGTGGTGAGGGCGGACCTGCTCCTCCCAATTCACGACCGAACCCAGGC
TCTGGACCGGACTCGCATGGTTTCATCGATGTGCCCCTAACTTCTCTTCC
GAGTCACCGTGACGCCGATGAGACTGCTGCGCGCTCGCAGCCGGCACCCC
GATATGAAGTTGCGACCAGCCAGGGAAGTTCTGCCGCCGTGGTGAGCAGC
GAATTGGAGTATCCGGACGAGAAAGTCGGGTTCGCAGGCCAGCGCAATGC
TCTTCGAGTGGATGGGGTGTCGGATCTACGCGGGAGCAGCTATGTGGAGT
ATGGAATAGAGAAGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008800-T1.utr3p1 | KJC3_008800-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.16 |
| Note | BUSCO:EOG09261VUC |
| Product | plasma membrane fusion protein prm1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3083662..3087200 - |
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