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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3100859..3102322- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008806-T1 ID=KJC3_008806-T1|Name=KJC3_008806-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1464bp|location=Sequence derived from alignment at ch6:3100859..3102322- (Aspergillus niger KJC3)
ATGATCAACTACAATGTCGATCTGCTGAATCGCTATGATCTGGAACATTC
ATTCTTTCATCTGGACCGGCACGAACCCACCGTGGGTTTCACTTATGATG
CCACCCGATTATGTGGCTCCACTTACCCTGCTAACGCGAATACGATCGCT
GCCGCTGCGCCCTCGACGACTGCGACAGCTGACGAGGACACATCAGCCTG
GCTTTACACTCGATTGCTGGTGGCCTCGCACCTTGCAGGCTACCTTCGCG
GTCAACTGGAGCAGCAGAAAGGGTACACTGCCACAGTGGGGATCTCTACG
TCCAAGCTTCTCGCCAAGCTCGCAGGCAGCACTCATAAACCGAACAACCA
GACCACGCTACTTCCCCCGTATACTACACCGACGCTGGCTGCGCCCAGTA
ATGTGCTCGATTTTCTTGATGCGCACGAGATCAGGAAGATCCCTGGGATC
GGCTCCAAACTGACGCGGAAACTCAGTCACTATCTCGCTGATGGAGGCGC
TCACTCAGCCCCAGCGGTGACCACCGACGACACCGCTGATTCTAACAAGG
TGACTGTGAGAGATATTCGATTGTTGCCTGGCATGGGCCCGTCCCTGCTC
AGTCGGATATTAGGGGGCCCAGGGGCACCCCGAGATATCGGGGTGCGAGT
CTGGGGACTGCTGCATGGCGTAGACAATACCGAGGTCGTCCAGGCAGGAG
ATTTGCCCACGCAGATAAGCATTGAAGATTCCTACGGTCGCCTGGACAGC
CTTGACAGCGTCCGAAAAGAGCTAGTCTTGCTAACAGGGAGCTTACTTCG
TCGGATGCGGACGGATCTGACAGAAAAGGACAGGGAGACTGACAGTATAG
CAGCAAACCAATCTGCAATGTCGAAAGTCCGATGGCTTGCGCATCCGCGA
ACCCTGCGGCTGTCCACACGGCCCCGGTCTGCCACCGACAGTGCACAATC
TTACCATGGGGGGAGAATCTCTCGCTCAGCGCCGCTGCCCGGATATGTCT
TCCATATTGATGAGAGTGTGGATGCGCTGGCTGAACGATTGGTACAAGAT
CAGCTACTGTCCATGTTCCGCAAGCTTCACCCGGAGAGGTCTGGGTGGAA
CCTGCGATTGATGAACGTCGCTGTGACAAACCTGGTAGATGCAGCTGGAG
AACGGAAGCAAAGCAGTGGACGCGATATTGGTAAGATGTTTCAAACCCAA
GGGTCACGGCGCAACGATGCCTTGGCCGTTTCTGAGTCGGGGCACGTATC
TACGGGTAACAGCGGCACGATGGTCGTCACCCCTCAGGAGCCCTTCCATC
CTGGAGACGCTGCAGCCATGACTGAGAACGAAGTGGAGGAAGCTGCATGG
GAAGAGAGCGACGGAGAAGATGGCATGGCTTGTGTAGCATGTGGCGTCTG
CGGCGCCATGATTCCACATTTCGCCCGAGACGCGCACGAAGCATTTCATT
TGGTTTCAGACTGA back to topCoding sequence (CDS) from alignment at ch6:3100859..3102322- >KJC3_008806-T1 ID=KJC3_008806-T1|Name=KJC3_008806-T1|organism=Aspergillus niger KJC3|type=CDS|length=1464bp|location=Sequence derived from alignment at ch6:3100859..3102322- (Aspergillus niger KJC3)
ATGATCAACTACAATGTCGATCTGCTGAATCGCTATGATCTGGAACATTC
ATTCTTTCATCTGGACCGGCACGAACCCACCGTGGGTTTCACTTATGATG
CCACCCGATTATGTGGCTCCACTTACCCTGCTAACGCGAATACGATCGCT
GCCGCTGCGCCCTCGACGACTGCGACAGCTGACGAGGACACATCAGCCTG
GCTTTACACTCGATTGCTGGTGGCCTCGCACCTTGCAGGCTACCTTCGCG
GTCAACTGGAGCAGCAGAAAGGGTACACTGCCACAGTGGGGATCTCTACG
TCCAAGCTTCTCGCCAAGCTCGCAGGCAGCACTCATAAACCGAACAACCA
GACCACGCTACTTCCCCCGTATACTACACCGACGCTGGCTGCGCCCAGTA
ATGTGCTCGATTTTCTTGATGCGCACGAGATCAGGAAGATCCCTGGGATC
GGCTCCAAACTGACGCGGAAACTCAGTCACTATCTCGCTGATGGAGGCGC
TCACTCAGCCCCAGCGGTGACCACCGACGACACCGCTGATTCTAACAAGG
TGACTGTGAGAGATATTCGATTGTTGCCTGGCATGGGCCCGTCCCTGCTC
AGTCGGATATTAGGGGGCCCAGGGGCACCCCGAGATATCGGGGTGCGAGT
CTGGGGACTGCTGCATGGCGTAGACAATACCGAGGTCGTCCAGGCAGGAG
ATTTGCCCACGCAGATAAGCATTGAAGATTCCTACGGTCGCCTGGACAGC
CTTGACAGCGTCCGAAAAGAGCTAGTCTTGCTAACAGGGAGCTTACTTCG
TCGGATGCGGACGGATCTGACAGAAAAGGACAGGGAGACTGACAGTATAG
CAGCAAACCAATCTGCAATGTCGAAAGTCCGATGGCTTGCGCATCCGCGA
ACCCTGCGGCTGTCCACACGGCCCCGGTCTGCCACCGACAGTGCACAATC
TTACCATGGGGGGAGAATCTCTCGCTCAGCGCCGCTGCCCGGATATGTCT
TCCATATTGATGAGAGTGTGGATGCGCTGGCTGAACGATTGGTACAAGAT
CAGCTACTGTCCATGTTCCGCAAGCTTCACCCGGAGAGGTCTGGGTGGAA
CCTGCGATTGATGAACGTCGCTGTGACAAACCTGGTAGATGCAGCTGGAG
AACGGAAGCAAAGCAGTGGACGCGATATTGGTAAGATGTTTCAAACCCAA
GGGTCACGGCGCAACGATGCCTTGGCCGTTTCTGAGTCGGGGCACGTATC
TACGGGTAACAGCGGCACGATGGTCGTCACCCCTCAGGAGCCCTTCCATC
CTGGAGACGCTGCAGCCATGACTGAGAACGAAGTGGAGGAAGCTGCATGG
GAAGAGAGCGACGGAGAAGATGGCATGGCTTGTGTAGCATGTGGCGTCTG
CGGCGCCATGATTCCACATTTCGCCCGAGACGCGCACGAAGCATTTCATT
TGGTTTCAGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003684 | damaged DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043502 |
| DBxref | InterPro:IPR001126 |
| DBxref | InterPro:IPR043128 |
| DBxref | InterPro:IPR017961 |
| DBxref | PFAM:PF11799 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3100859..3102322 - |
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