You are here

KJC3_008806-T1, KJC3_008806-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008806-T1
Unique NameKJC3_008806-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3100859..3102322-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008806-T1 ID=KJC3_008806-T1|Name=KJC3_008806-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1464bp|location=Sequence derived from alignment at ch6:3100859..3102322- (Aspergillus niger KJC3)
ATGATCAACTACAATGTCGATCTGCTGAATCGCTATGATCTGGAACATTC ATTCTTTCATCTGGACCGGCACGAACCCACCGTGGGTTTCACTTATGATG CCACCCGATTATGTGGCTCCACTTACCCTGCTAACGCGAATACGATCGCT GCCGCTGCGCCCTCGACGACTGCGACAGCTGACGAGGACACATCAGCCTG GCTTTACACTCGATTGCTGGTGGCCTCGCACCTTGCAGGCTACCTTCGCG GTCAACTGGAGCAGCAGAAAGGGTACACTGCCACAGTGGGGATCTCTACG TCCAAGCTTCTCGCCAAGCTCGCAGGCAGCACTCATAAACCGAACAACCA GACCACGCTACTTCCCCCGTATACTACACCGACGCTGGCTGCGCCCAGTA ATGTGCTCGATTTTCTTGATGCGCACGAGATCAGGAAGATCCCTGGGATC GGCTCCAAACTGACGCGGAAACTCAGTCACTATCTCGCTGATGGAGGCGC TCACTCAGCCCCAGCGGTGACCACCGACGACACCGCTGATTCTAACAAGG TGACTGTGAGAGATATTCGATTGTTGCCTGGCATGGGCCCGTCCCTGCTC AGTCGGATATTAGGGGGCCCAGGGGCACCCCGAGATATCGGGGTGCGAGT CTGGGGACTGCTGCATGGCGTAGACAATACCGAGGTCGTCCAGGCAGGAG ATTTGCCCACGCAGATAAGCATTGAAGATTCCTACGGTCGCCTGGACAGC CTTGACAGCGTCCGAAAAGAGCTAGTCTTGCTAACAGGGAGCTTACTTCG TCGGATGCGGACGGATCTGACAGAAAAGGACAGGGAGACTGACAGTATAG CAGCAAACCAATCTGCAATGTCGAAAGTCCGATGGCTTGCGCATCCGCGA ACCCTGCGGCTGTCCACACGGCCCCGGTCTGCCACCGACAGTGCACAATC TTACCATGGGGGGAGAATCTCTCGCTCAGCGCCGCTGCCCGGATATGTCT TCCATATTGATGAGAGTGTGGATGCGCTGGCTGAACGATTGGTACAAGAT CAGCTACTGTCCATGTTCCGCAAGCTTCACCCGGAGAGGTCTGGGTGGAA CCTGCGATTGATGAACGTCGCTGTGACAAACCTGGTAGATGCAGCTGGAG AACGGAAGCAAAGCAGTGGACGCGATATTGGTAAGATGTTTCAAACCCAA GGGTCACGGCGCAACGATGCCTTGGCCGTTTCTGAGTCGGGGCACGTATC TACGGGTAACAGCGGCACGATGGTCGTCACCCCTCAGGAGCCCTTCCATC CTGGAGACGCTGCAGCCATGACTGAGAACGAAGTGGAGGAAGCTGCATGG GAAGAGAGCGACGGAGAAGATGGCATGGCTTGTGTAGCATGTGGCGTCTG CGGCGCCATGATTCCACATTTCGCCCGAGACGCGCACGAAGCATTTCATT TGGTTTCAGACTGA
back to top

Coding sequence (CDS) from alignment at ch6:3100859..3102322-

>KJC3_008806-T1 ID=KJC3_008806-T1|Name=KJC3_008806-T1|organism=Aspergillus niger KJC3|type=CDS|length=1464bp|location=Sequence derived from alignment at ch6:3100859..3102322- (Aspergillus niger KJC3)
ATGATCAACTACAATGTCGATCTGCTGAATCGCTATGATCTGGAACATTC
ATTCTTTCATCTGGACCGGCACGAACCCACCGTGGGTTTCACTTATGATG
CCACCCGATTATGTGGCTCCACTTACCCTGCTAACGCGAATACGATCGCT
GCCGCTGCGCCCTCGACGACTGCGACAGCTGACGAGGACACATCAGCCTG
GCTTTACACTCGATTGCTGGTGGCCTCGCACCTTGCAGGCTACCTTCGCG
GTCAACTGGAGCAGCAGAAAGGGTACACTGCCACAGTGGGGATCTCTACG
TCCAAGCTTCTCGCCAAGCTCGCAGGCAGCACTCATAAACCGAACAACCA
GACCACGCTACTTCCCCCGTATACTACACCGACGCTGGCTGCGCCCAGTA
ATGTGCTCGATTTTCTTGATGCGCACGAGATCAGGAAGATCCCTGGGATC
GGCTCCAAACTGACGCGGAAACTCAGTCACTATCTCGCTGATGGAGGCGC
TCACTCAGCCCCAGCGGTGACCACCGACGACACCGCTGATTCTAACAAGG
TGACTGTGAGAGATATTCGATTGTTGCCTGGCATGGGCCCGTCCCTGCTC
AGTCGGATATTAGGGGGCCCAGGGGCACCCCGAGATATCGGGGTGCGAGT
CTGGGGACTGCTGCATGGCGTAGACAATACCGAGGTCGTCCAGGCAGGAG
ATTTGCCCACGCAGATAAGCATTGAAGATTCCTACGGTCGCCTGGACAGC
CTTGACAGCGTCCGAAAAGAGCTAGTCTTGCTAACAGGGAGCTTACTTCG
TCGGATGCGGACGGATCTGACAGAAAAGGACAGGGAGACTGACAGTATAG
CAGCAAACCAATCTGCAATGTCGAAAGTCCGATGGCTTGCGCATCCGCGA
ACCCTGCGGCTGTCCACACGGCCCCGGTCTGCCACCGACAGTGCACAATC
TTACCATGGGGGGAGAATCTCTCGCTCAGCGCCGCTGCCCGGATATGTCT
TCCATATTGATGAGAGTGTGGATGCGCTGGCTGAACGATTGGTACAAGAT
CAGCTACTGTCCATGTTCCGCAAGCTTCACCCGGAGAGGTCTGGGTGGAA
CCTGCGATTGATGAACGTCGCTGTGACAAACCTGGTAGATGCAGCTGGAG
AACGGAAGCAAAGCAGTGGACGCGATATTGGTAAGATGTTTCAAACCCAA
GGGTCACGGCGCAACGATGCCTTGGCCGTTTCTGAGTCGGGGCACGTATC
TACGGGTAACAGCGGCACGATGGTCGTCACCCCTCAGGAGCCCTTCCATC
CTGGAGACGCTGCAGCCATGACTGAGAACGAAGTGGAGGAAGCTGCATGG
GAAGAGAGCGACGGAGAAGATGGCATGGCTTGTGTAGCATGTGGCGTCTG
CGGCGCCATGATTCCACATTTCGCCCGAGACGCGCACGAAGCATTTCATT
TGGTTTCAGACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003684damaged DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008806KJC3_008806Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008806-T1.cdsKJC3_008806-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008806-T1.exon1KJC3_008806-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008806-T1KJC3_008806-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR043502
DBxrefInterPro:IPR001126
DBxrefInterPro:IPR043128
DBxrefInterPro:IPR017961
DBxrefPFAM:PF11799
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3100859..3102322 -