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KJC3_008820-T1, KJC3_008820-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008820-T1
Unique NameKJC3_008820-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3155444..3156667-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008820-T1 ID=KJC3_008820-T1|Name=KJC3_008820-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1224bp|location=Sequence derived from alignment at ch6:3155444..3156667- (Aspergillus niger KJC3)
CTCAACATTTCTCCTCCTCATGCAATGTAACAAATATATAACAGATAGTA
TTGGATCGAAAACCAAAAACTCCATCCTTCTCTCTCCTACGTACTTCGTA
GTACTAAGTACTGGTAAGTAAGCCATTCAAACCAAGATGCCACTCCGTGA
CGAACCAATCACCACCGAGCGGAAACCAACCTACGCCATCGGGCTAGTCT
CTCCGCGGGCGGAATCCCACCCGACAACTTTTCCTCCGCAATTCAAGATC
ACTCCATCGATCTTCTTCATCTATATCATCCTCAACCTCCAATCCACCAC
CAGCTAACAGACACACTCAAACCAATGACCTCGACCTTCCTTCTCTCCCG
GCGCCTCGCCGCGCTCACCTTATCAAAGCCCCTATTCCTAACACCACAAG
CAACAACAGCAGCAGCAGCTACCCGCGCCCTCCCATCATACCTTCACCAC
AAGCACAACACCACTCAAATACAACAGGTACAATCCCCAAACCCAACCAG
AAACACACACACACCCTAGTACACCAACCCAATCTAACAAATGCAAACAA
AAACTAGACCCGCCCCCTCTCCCACACCCCGCACCACCTCTCGTCCCCCT
TCCGCCTCACCACCAACAATCCCAACACATACACTCCCGAAGATGCCGAA
GGCGAATACTACAGCCCCTACAAACCGAAACGCCAATGGCCACCGGACAT
GTCGAAGCTCTCTCCGAAGCACCAGTTCCGTTTAGAACGGAAGTACCGGC
GTCGCGCGGCGCTGAAATACGCTCGGCCGAAGTGGGTTAAAGCGACCAAG
ATTACTCAGTGGGTGGTTATTGGGTGTATGTACAATCTATTCCCACCGAT
ACTGTTTGGTTTGGAGATGGCGGCGAATCACACGTGTGGCGTGACATTGC
TTGCTAGATTGGGAAGGCTAACGTACATTATGGGATTTAGTCGTTCTGGT
GTATGCGTTGCTCTTCATGGAGTGGGATGAGCGCGGGAGTCCGTTTGATG
AGGTGAGTGATATTTATCTACCTGCTGAGTATGGTTGAGGCAGGTGAGCT
TACTGTGGTTAGATTCGACGGACGTTCTTTGCTGGTGTCAAGGGTGCTTT
CTCGACGCCGCCGCCTCCTCGTCCGGTGAAGAGGTCGGAGGATGAGTCAG
GTGCGCAATAAATAACGAACAAGCCAAGCCAGGTGCTGGAGGGTTTTACA
GCTGGATATCATTAGACTAGACCA
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Coding sequence (CDS) from alignment at ch6:3155444..3156667-

>KJC3_008820-T1 ID=KJC3_008820-T1|Name=KJC3_008820-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch6:3155444..3156667- (Aspergillus niger KJC3)
ATTCGACGGACGTTCTTTGCTGGTGTCAAGGGTGCTTTCTCGACGCCGCC
GCCTCCTCGTCCGGTGAAGAGGTCGGAGGATGAGTCAGGTGCGCAATAAT
CGTTCTGGTGTATGCGTTGCTCTTCATGGAGTGGGATGAGCGCGGGAGTC
CGTTTGATGAGACCCGCCCCCTCTCCCACACCCCGCACCACCTCTCGTCC
CCCTTCCGCCTCACCACCAACAATCCCAACACATACACTCCCGAAGATGC
CGAAGGCGAATACTACAGCCCCTACAAACCGAAACGCCAATGGCCACCGG
ACATGTCGAAGCTCTCTCCGAAGCACCAGTTCCGTTTAGAACGGAAGTAC
CGGCGTCGCGCGGCGCTGAAATACGCTCGGCCGAAGTGGGTTAAAGCGAC
CAAGATTACTCAGTGGGTGGTTATTGGGTATGACCTCGACCTTCCTTCTC
TCCCGGCGCCTCGCCGCGCTCACCTTATCAAAGCCCCTATTCCTAACACC
ACAAGCAACAACAGCAGCAGCAGCTACCCGCGCCCTCCCATCATACCTTC
ACCACAAGCACAACACCACTCAAATACAACAGATTCGACGGACGTTCTTT
GCTGGTGTCAAGGGTGCTTTCTCGACGCCGCCGCCTCCTCGTCCGGTGAA
GAGGTCGGAGGATGAGTCAGGTGCGCAATAATCGTTCTGGTGTATGCGTT
GCTCTTCATGGAGTGGGATGAGCGCGGGAGTCCGTTTGATGAGACCCGCC
CCCTCTCCCACACCCCGCACCACCTCTCGTCCCCCTTCCGCCTCACCACC
AACAATCCCAACACATACACTCCCGAAGATGCCGAAGGCGAATACTACAG
CCCCTACAAACCGAAACGCCAATGGCCACCGGACATGTCGAAGCTCTCTC
CGAAGCACCAGTTCCGTTTAGAACGGAAGTACCGGCGTCGCGCGGCGCTG
AAATACGCTCGGCCGAAGTGGGTTAAAGCGACCAAGATTACTCAGTGGGT
GGTTATTGGGTATGACCTCGACCTTCCTTCTCTCCCGGCGCCTCGCCGCG
CTCACCTTATCAAAGCCCCTATTCCTAACACCACAAGCAACAACAGCAGC
AGCAGCTACCCGCGCCCTCCCATCATACCTTCACCACAAGCACAACACCA
CTCAAATACAACAGATTCGACGGACGTTCTTTGCTGGTGTCAAGGGTGCT
TTCTCGACGCCGCCGCCTCCTCGTCCGGTGAAGAGGTCGGAGGATGAGTC
AGGTGCGCAATAATCGTTCTGGTGTATGCGTTGCTCTTCATGGAGTGGGA
TGAGCGCGGGAGTCCGTTTGATGAGACCCGCCCCCTCTCCCACACCCCGC
ACCACCTCTCGTCCCCCTTCCGCCTCACCACCAACAATCCCAACACATAC
ACTCCCGAAGATGCCGAAGGCGAATACTACAGCCCCTACAAACCGAAACG
CCAATGGCCACCGGACATGTCGAAGCTCTCTCCGAAGCACCAGTTCCGTT
TAGAACGGAAGTACCGGCGTCGCGCGGCGCTGAAATACGCTCGGCCGAAG
TGGGTTAAAGCGACCAAGATTACTCAGTGGGTGGTTATTGGGTATGACCT
CGACCTTCCTTCTCTCCCGGCGCCTCGCCGCGCTCACCTTATCAAAGCCC
CTATTCCTAACACCACAAGCAACAACAGCAGCAGCAGCTACCCGCGCCCT
CCCATCATACCTTCACCACAAGCACAACACCACTCAAATACAACAGATTC
GACGGACGTTCTTTGCTGGTGTCAAGGGTGCTTTCTCGACGCCGCCGCCT
CCTCGTCCGGTGAAGAGGTCGGAGGATGAGTCAGGTGCGCAATAATCGTT
CTGGTGTATGCGTTGCTCTTCATGGAGTGGGATGAGCGCGGGAGTCCGTT
TGATGAGACCCGCCCCCTCTCCCACACCCCGCACCACCTCTCGTCCCCCT
TCCGCCTCACCACCAACAATCCCAACACATACACTCCCGAAGATGCCGAA
GGCGAATACTACAGCCCCTACAAACCGAAACGCCAATGGCCACCGGACAT
GTCGAAGCTCTCTCCGAAGCACCAGTTCCGTTTAGAACGGAAGTACCGGC
GTCGCGCGGCGCTGAAATACGCTCGGCCGAAGTGGGTTAAAGCGACCAAG
ATTACTCAGTGGGTGGTTATTGGGTATGACCTCGACCTTCCTTCTCTCCC
GGCGCCTCGCCGCGCTCACCTTATCAAAGCCCCTATTCCTAACACCACAA
GCAACAACAGCAGCAGCAGCTACCCGCGCCCTCCCATCATACCTTCACCA
CAAGCACAACACCACTCAAATACAACAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008820KJC3_008820Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008820-T1KJC3_008820-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008820-T1.cdsKJC3_008820-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008820-T1.utr3p1KJC3_008820-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008820-T1.exon5KJC3_008820-T1.exon5Aspergillus niger KJC3exon
KJC3_008820-T1.exon4KJC3_008820-T1.exon4Aspergillus niger KJC3exon
KJC3_008820-T1.exon3KJC3_008820-T1.exon3Aspergillus niger KJC3exon
KJC3_008820-T1.exon2KJC3_008820-T1.exon2Aspergillus niger KJC3exon
KJC3_008820-T1.exon1KJC3_008820-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008820-T1.utr5p2KJC3_008820-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_008820-T1.utr5p1KJC3_008820-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3155444..3156667 -
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