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KJC3_008822-T1, KJC3_008822-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008822-T1
Unique NameKJC3_008822-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3158251..3159740-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008822-T1 ID=KJC3_008822-T1|Name=KJC3_008822-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1490bp|location=Sequence derived from alignment at ch6:3158251..3159740- (Aspergillus niger KJC3)
TATATGAATCTGCTACCTTATACTCCGCCTACTACCTACTACTATCTACT
CATTTCAATCCAGTACAGCCACCATGTCGAACCTCGAAGAAAAGATCTCC
CTCTTACACAACTACTCCGCCTGCGATGTACATCCCCTTAACCATATTCA
ACCCATCAAACACTACTAACTCATGAAAACCAGGTCTCCGACGCCCTCCT
CAAACTCCAATCCGTCCCTTCAAATACCCCACCCCGAGCAGGCTACATCG
CAGACCTAAGTATATACACCCATCGTCAACCACCACCGCTACCAAATTAC
TAACAAACCCCATCTACTAAAAACAGCCCCCTACCCTCCAAACACCACCA
CACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCATCCCCAAA
TCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACGCACTGGTC
CGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACCCCCAGACC
AGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGAAAGTTCGG
GGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGCGCGGAGCT
CAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGACGGTGGGGA
GTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGTGTGTTTCG
GGGGTTACTGTACGGGAGGTATGTCTTTCTTTCTTTCTTTTTGTTGTAAG
TGTTTGAGAATTGGGTTGGGTTGGCTAATGTGTGTGCAGGGAGACATCAT
CTTCTGCGATTACGAGGAAGGAGGGGTGGTGGCTATACCTCGGGACTTGC
TGGATCGGGTTCTCGAGCTGATGCCGAAGTTGGTGGGGATGGATGATAAG
GTCAAGGACGCGGTGGAGGGGGGAATGAGTGTGTTTGAGGCATTTGGGAA
GTTTAGGGGGAAGATCTAAGTCTATAGGGGTGGAGCGGTGCTGAAGGTAC
AGTAAGTAATGCTCAGTAGGTTCAATTTGTAAGGCTAATCTTCTGCAGTA
TGGTATATAAAAGTGGTGTGAAGACCAGCTTGGAATATACGAAAATAAGA
TAGATACATCGCTAGAGATAATAAAAACAAATCATCAATCTAAGTTACAG
CCTTTTACTTTACTCCGCAACCCAAACGGCTGCCATACCCATACCCGTTC
CGACGCACATGCTGCTAACACCAATCTTCTTGTTCGTCCGCTTCAGCTCC
GTCAGCAGCGTGCTGATCTGGCGCGAACCCGTGCAGCCGAGCGGGTGTCC
AAAGGCAATCGCACCACCCTTGGGATTGATCTTCTCCTGCGGCAGACCCA
GCTCGTTGATGCACCAGACGCACTGCGAGGCAAACGCTTCGTTGATCTCA
TAGATATCCACGTCGTCCTTGGTGATGCCGGCCTTCTCCAAGGCCACGGG
GATGGCCTTCCACGGGCCGATACCCATGAGCAGAGGCTTG
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Coding sequence (CDS) from alignment at ch6:3158251..3159740-

>KJC3_008822-T1 ID=KJC3_008822-T1|Name=KJC3_008822-T1|organism=Aspergillus niger KJC3|type=CDS|length=2808bp|location=Sequence derived from alignment at ch6:3158251..3159740- (Aspergillus niger KJC3)
GGAGACATCATCTTCTGCGATTACGAGGAAGGAGGGGTGGTGGCTATACC
TCGGGACTTGCTGGATCGGGTTCTCGAGCTGATGCCGAAGTTGGTGGGGA
TGGATGATAAGGTCAAGGACGCGGTGGAGGGGGGAATGAGTGTGTTTGAG
GCATTTGGGAAGTTTAGGGGGAAGATCTAACCCCCTACCCTCCAAACACC
ACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCATCCC
CAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACGCACT
GGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACCCCCA
GACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGAAAGT
TCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGCGCGG
AGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGACGGTG
GGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGTGTGT
TTCGGGGGTTACTGTACGGGAGGTCTCCGACGCCCTCCTCAAACTCCAAT
CCGTCCCTTCAAATACCCCACCCCGAGCAGGCTACATCGCAGACCTAAAT
GTCGAACCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCCGCCTGCG
ATGGAGACATCATCTTCTGCGATTACGAGGAAGGAGGGGTGGTGGCTATA
CCTCGGGACTTGCTGGATCGGGTTCTCGAGCTGATGCCGAAGTTGGTGGG
GATGGATGATAAGGTCAAGGACGCGGTGGAGGGGGGAATGAGTGTGTTTG
AGGCATTTGGGAAGTTTAGGGGGAAGATCTAACCCCCTACCCTCCAAACA
CCACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCATC
CCCAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACGCA
CTGGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACCCC
CAGACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGAAA
GTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGCGC
GGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGACGG
TGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGTGT
GTTTCGGGGGTTACTGTACGGGAGGTCTCCGACGCCCTCCTCAAACTCCA
ATCCGTCCCTTCAAATACCCCACCCCGAGCAGGCTACATCGCAGACCTAA
ATGTCGAACCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCCGCCTG
CGATGGAGACATCATCTTCTGCGATTACGAGGAAGGAGGGGTGGTGGCTA
TACCTCGGGACTTGCTGGATCGGGTTCTCGAGCTGATGCCGAAGTTGGTG
GGGATGGATGATAAGGTCAAGGACGCGGTGGAGGGGGGAATGAGTGTGTT
TGAGGCATTTGGGAAGTTTAGGGGGAAGATCTAACCCCCTACCCTCCAAA
CACCACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATTCA
TCCCCAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCACG
CACTGGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAACC
CCCAGACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGATGA
AAGTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATCGC
GCGGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCGAC
GGTGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGTGT
GTGTTTCGGGGGTTACTGTACGGGAGGTCTCCGACGCCCTCCTCAAACTC
CAATCCGTCCCTTCAAATACCCCACCCCGAGCAGGCTACATCGCAGACCT
AAATGTCGAACCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCCGCC
TGCGATGGAGACATCATCTTCTGCGATTACGAGGAAGGAGGGGTGGTGGC
TATACCTCGGGACTTGCTGGATCGGGTTCTCGAGCTGATGCCGAAGTTGG
TGGGGATGGATGATAAGGTCAAGGACGCGGTGGAGGGGGGAATGAGTGTG
TTTGAGGCATTTGGGAAGTTTAGGGGGAAGATCTAACCCCCTACCCTCCA
AACACCACCACACCCACCAAACTAATCGCCCCCGCCAGCACCCTTCAATT
CATCCCCAAATCCAACCCCACCCCCACCAGCAGCAGCATCCCACCCTCCA
CGCACTGGTCCGACCTCACCACCCCAAATACAATACTTGTCATCTCTCAA
CCCCCAGACCAGCACTGCGCCGTAGTCGGAGGCATCATGGCCCTTCGGAT
GAAAGTTCGGGGGGTGCTCGGCGTGGTGGTCGACGGAAGAGTGCGCGATC
GCGCGGAGCTCAAGGCCTCTGGATTGGGGATCTGGGCGAGGGGAGGGTCG
ACGGTGGGGAGTGGGGCCGAGGCGAAGCCGGGCGAGATGGGTGGGGAGGT
GTGTGTTTCGGGGGTTACTGTACGGGAGGTCTCCGACGCCCTCCTCAAAC
TCCAATCCGTCCCTTCAAATACCCCACCCCGAGCAGGCTACATCGCAGAC
CTAAATGTCGAACCTCGAAGAAAAGATCTCCCTCTTACACAACTACTCCG
CCTGCGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008822KJC3_008822Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008822-T1KJC3_008822-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008822-T1.cdsKJC3_008822-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008822-T1.utr3p2KJC3_008822-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_008822-T1.utr3p1KJC3_008822-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008822-T1.exon5KJC3_008822-T1.exon5Aspergillus niger KJC3exon
KJC3_008822-T1.exon4KJC3_008822-T1.exon4Aspergillus niger KJC3exon
KJC3_008822-T1.exon3KJC3_008822-T1.exon3Aspergillus niger KJC3exon
KJC3_008822-T1.exon2KJC3_008822-T1.exon2Aspergillus niger KJC3exon
KJC3_008822-T1.exon1KJC3_008822-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008822-T1.utr5p1KJC3_008822-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036704
DBxrefInterPro:IPR005493
DBxrefPFAM:PF03737
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3158251..3159740 -
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