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KJC3_008824-T1, KJC3_008824-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008824-T1
Unique NameKJC3_008824-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3160913..3162264-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008824-T1 ID=KJC3_008824-T1|Name=KJC3_008824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1352bp|location=Sequence derived from alignment at ch6:3160913..3162264- (Aspergillus niger KJC3)
CGGATTCCCGCGGCCACACCAGCTTCACCTTTCCCCTCGCTGCTACTCCA
ATTGAGCCTTGTGCATTGCTCTATTCCTGTCTCCTTGACTCCTATCGTCA
TCATGGGTGTCCCTTTCGAGGCTCTCCTTCCCTTCGGCATCATCATCGGA
GTACGTTCAGCGACCATTTCCTCTCCCCATTTGTTTTCGACGTGGTAAGT
ACTGACCAATGCGTGACACAGTCGTTCACTGTCGGCGGTGCCGGCTTGTG
GGCTATCCGGAGATGGGACAACGAGGGCAAGATGCCGCGGTGGAACAAGG
ATAAGTGGGATAGAGTAAGTGAACCTGCCACTTACCCGATGCGACCGGGA
TCAGACGTACTAACTCTTTTACAGCAAAGTATGTTATAACCTCGATTGAT
GTCGTGCAACATCCAATTGGAGATCTCCTATTTCCGATCTTGAAAGAGAA
ACAGCGAGCTAACTCTCGACACCCCCCACCTACCAGTGATGGAGAGAGAC
CTGAGAATCACGGGCACGAAACGAGGACAATCGAGCAACCCGGAAGCTCC
CAAGGGATTCGAGCTCAGCAACCCCTGGAAGGTACGGACCAGCACAATCA
GCAGCAGTGAGCGAAGCAAAATACTGAACCATGGCAGATCGAGAAACGGA
TTTTCTAGACAGCATGGGTTGTCACACGTCATGTCATTATTCCCGCCTGT
TCCTTATTTATTCGGCCGCATTACTTTCGAGAGAAATATCCACGCAATGA
AAGATTGTTTGTATCATACTATAAAAGATATCTGGCCGGCTCTGGGTACA
CCGCCAGGTAGATTCTATCTTAGCCTTTGTTTCCAAACCGACATCTATTT
GATCTCAGATACAAAACCGCGGATAGCCTCCGCTTCATAATCGCGAAGAT
GCATATCAAACCACTTTGCCAGAGCTTTGACGCGATCTGCATCGCTCTCC
AGCGTCTCTAGAACCTCCGACTGTCCAAACTGTCTCTTTTTCACCTCCCG
CCCAGCAAGAATATACATCCCCTGCACTTCACTCTCCGCCTCATCCATGA
ACATCCTAGCACAAACCAGCGACTGCGTGAACCAGCTCGTGGGCCGCTGA
CTCGTCGCATAGTTCATAATTTCGAAATCTTGGGGCAGGAACTCCGTCCC
CAGGAACGAGTACATGGGAATCCACCTACTGTCAGGCGTATACCTGATCT
GATAGATCCAGACCTTTTGCGTCTGGTCCACGTACTCAGGCAGGGCCTCA
TGAACGAGACGCATCTCCGTCGGAGCCATGCAGACCGAAACGGAATCCTC
TTTGAGCGGCAAAGGCCGGGTAGGCCCATTACCCCCGAAGCCGACGTCCA
CC
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Coding sequence (CDS) from alignment at ch6:3160913..3162264-

>KJC3_008824-T1 ID=KJC3_008824-T1|Name=KJC3_008824-T1|organism=Aspergillus niger KJC3|type=CDS|length=1044bp|location=Sequence derived from alignment at ch6:3160913..3162264- (Aspergillus niger KJC3)
ATCGAGAAACGGATTTTCTAGTGATGGAGAGAGACCTGAGAATCACGGGC
ACGAAACGAGGACAATCGAGCAACCCGGAAGCTCCCAAGGGATTCGAGCT
CAGCAACCCCTGGAAGTCGTTCACTGTCGGCGGTGCCGGCTTGTGGGCTA
TCCGGAGATGGGACAACGAGGGCAAGATGCCGCGGTGGAACAAGGATAAG
TGGGATAGAGTAAATGGGTGTCCCTTTCGAGGCTCTCCTTCCCTTCGGCA
TCATCATCGGAATCGAGAAACGGATTTTCTAGTGATGGAGAGAGACCTGA
GAATCACGGGCACGAAACGAGGACAATCGAGCAACCCGGAAGCTCCCAAG
GGATTCGAGCTCAGCAACCCCTGGAAGTCGTTCACTGTCGGCGGTGCCGG
CTTGTGGGCTATCCGGAGATGGGACAACGAGGGCAAGATGCCGCGGTGGA
ACAAGGATAAGTGGGATAGAGTAAATGGGTGTCCCTTTCGAGGCTCTCCT
TCCCTTCGGCATCATCATCGGAATCGAGAAACGGATTTTCTAGTGATGGA
GAGAGACCTGAGAATCACGGGCACGAAACGAGGACAATCGAGCAACCCGG
AAGCTCCCAAGGGATTCGAGCTCAGCAACCCCTGGAAGTCGTTCACTGTC
GGCGGTGCCGGCTTGTGGGCTATCCGGAGATGGGACAACGAGGGCAAGAT
GCCGCGGTGGAACAAGGATAAGTGGGATAGAGTAAATGGGTGTCCCTTTC
GAGGCTCTCCTTCCCTTCGGCATCATCATCGGAATCGAGAAACGGATTTT
CTAGTGATGGAGAGAGACCTGAGAATCACGGGCACGAAACGAGGACAATC
GAGCAACCCGGAAGCTCCCAAGGGATTCGAGCTCAGCAACCCCTGGAAGT
CGTTCACTGTCGGCGGTGCCGGCTTGTGGGCTATCCGGAGATGGGACAAC
GAGGGCAAGATGCCGCGGTGGAACAAGGATAAGTGGGATAGAGTAAATGG
GTGTCCCTTTCGAGGCTCTCCTTCCCTTCGGCATCATCATCGGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008824KJC3_008824Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008824-T1KJC3_008824-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008824-T1.cdsKJC3_008824-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008824-T1.utr3p1KJC3_008824-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008824-T1.exon4KJC3_008824-T1.exon4Aspergillus niger KJC3exon
KJC3_008824-T1.exon3KJC3_008824-T1.exon3Aspergillus niger KJC3exon
KJC3_008824-T1.exon2KJC3_008824-T1.exon2Aspergillus niger KJC3exon
KJC3_008824-T1.exon1KJC3_008824-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008824-T1.utr5p1KJC3_008824-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017384
DBxrefPFAM:PF15879
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3160913..3162264 -
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