You are here

Home

KJC3_008828-T1, KJC3_008828-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008828-T1
Unique NameKJC3_008828-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3177592..3180667+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008828-T1 ID=KJC3_008828-T1|Name=KJC3_008828-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3076bp|location=Sequence derived from alignment at ch6:3177592..3180667+ (Aspergillus niger KJC3)
CCGGATGTTGCCTTCCTTTTTGGGGGAAAATCCCAACTGGAGGTGGGATT
CAACCGGCTTCTTCCCCTCGTTGACAGCCTCGCCTTCACTTCTCACTCCA
CAGTTGCTAGCATTCACTCTTTCGGCCTTGCTCCCCACTTTGCTCTTACG
ATCATTTTGCCTACACGCAGCTGTGTTGTCTCTGTTGTCGTCCATCCGCG
TCTGCTCTGATATTCTTACCCCAACGCATCGTCAAACCACCACTGTCCTA
ATCATGGCTTCCTACAAAGACGGAAGCCGTCAAGTACCTCTGCTCCAGGC
TTCTCCAGAGGTTTCAAATTTGGACATTCGAAGTACCTGGAGCGGTAGCC
TAGACGAGCCCGTCAACTGCAGAATCTCTATGGTGGTGAGCTGCTACATC
CCCATTACTGTACTCTGTCCGCTGCTCATCGAGAATTTCTCCCCTTCTTC
GGACTAGGTCCATTGTATTCCGAGCACGCAGCTATCTATCTTGAACATCC
GATCTGCCGGGGTTTCTATCGTCAATACACAGTTGGTTCGGCTTCAGCCT
GACCAGTATAGTGACGGTACTTGGTCAAGCTCGAGCTCCCCTCAGAGTCC
TTTATTCGCCTTTTCTTCAACTACAACAGAGTCTTACCCTGCACATTCCC
CGGTATCTGGCTCAGAGTCTTCTGGGGGAAATGTGCCCGCAAATATCGAG
AGTTCGGCTCAAAACTTGGTATCCTCGGTCGATGGAACTGTTGAAAACCT
CTCTATTTGCGATACTGGGCTCGATCAGCTGGATCATCATTCGGCTCAAG
TATCATCTGCGTCCGATCATAGCGATGAATATACTAGGTTTATAGATGCT
ATCAAGCAGCATAGTCTGGGAAAGAGAAGTGCTGCAGCGGCAGGCCTGAC
GGAATCTCAGCCGGGCTCGGATACGGAAGAGGGTCAAAGTAGGAAAGCGG
CGCAGCAAAACCATATTGACAGAATTAGTTCTACAAAATTTGAGCCCAAA
AGGAGAGTGTCTGAGGGCTGGGCAAACCACAGTGGGCACTTGGTCTCCAA
CTCCCCGCTTCCCAGAGAAAAGCAGCATGAACCCCTCAGCGGAGAGTTCG
TACCCCAGACTGACAACATAACACAAAAAATATTTTCCGGCAGTACGCAA
ACCAAGGGTGTTAATAGTGCTTTTGAGGTCAAGGACATAGCAAGTAGCAT
GAAGCTCGAAGCCAGTGATGCTGGTGCTACTTTCGAGTCTTCACTAGCTC
ATTCAGACACAGGCAAAGAACCAGTTCATGATCCTGAACAGCCAGAGGTT
GCGGGGTCCGTCTTTGGTGAGGCTGATCCATGTTTCTCATTGATTGATGA
AATGACACCGTTACCTGAGCCTTCAAATGAAGATACTACAAAAGTATCGG
GCGAAGTGCGCAAAGACCCCTTCTGGAAATGGTCAAATGCGGACTCAACA
CCATCCATTCCAGCTTTGAAAGAATCGCCACTATCCAATTCTGACCCCGG
AGAGGTACCTATGGTAGCTGAAATTGAACCAGAGGAGATCGCAAAGGCTC
GGCTACTTCCCAAGCTCACCATACCGCAACCTTCTCATGGGAAGACTGCG
GATGATAAGGAGACCTCCCCGCAAAGTCATGATGACGAGTCACGCGCAGA
TGTACACTGCGAACCAGTATTTGATATTAACCGTGGTATTCTAATAGTCA
AGAATCCTTCCAATGTCCAGCCAGAACACTACAAGCTCATTGTTACCATA
TCTGTGTCTCTGCGGCAAAGAAAGCAAAGCGGATGGAATGACTTAGTTAT
CCAAGGCCTACCTAAGTTGGTACCTGGCGAGTACGGATACCTCCTTTTCC
TCATGCCAGAGGAATATGGTCTCGAGTTCCGTACGACGAACTTACAGAGG
CATAAGATCGTGGAAAATTGCTTCCTGGGTGAGTTCAGCTATACGGGTGA
CCTTGTGATCCCTGTTCGAAGGTGCGAGCGGAAGTTTTACGGAGTTGTCA
AGGACTTTACGGTACACCAGGAAATCAGGGCCGAATATGCATTGGCCTCT
GTCAAAGTAGAAAGTCCGCCAGAATTACAAGCAACATACCACGCTGTTTG
CTCTGTCAGACTGCACAATCGTTGCTTTTGGGCCGAAACATGCTGTCTCA
TTCTGTCCATCGATGGGGGACCAGATAGTGTTTTCCGCAGTAAACTTGAT
TCTCAAGAAAGCGGTCTGAAGATGATCCATATCCCAGCAAGAGAGAATGT
CGGTATTGGATCTGCGTATCTACAGATCGTTTGCTCGCCCCGAGATCTTG
AATTGTTCTGTGTGAACTGGACAGTTCGGCTTCCCGGGCACCATGCAATC
AGTTGGCTCCCACGAATTTACCCGGCATTTTCCAGCCCCAGTGACCGTGT
TAGACATCATCTCCGACGGACATTTGAGAAAGTGGAGGCTGTATCACTTT
CACGCATTGAGCGTTCTCGTGGCTACGAAATGGGGGAACCTGAGATCGAT
GACTCGAAAGAGCCCGCAGGTATAAGAGATGCCATTGCTATCGTGGCGGA
CCTGCCTGCTACGGACAAACAGCCAATGAATAACTCCGCGAATATTCCGA
GATCAGAGAACGTTATACAAAAGATGAGACTCGTTTTCATTTGCGCTATC
TATGTTCTGGGAACAATTCTTGCGTTCTGGCTCAATAATACCGTTATTGA
CGCTGTGGCTTCACCAACTAAGGCGACATCCACTGTTGCTAATATGGATG
CGGAAAGCCTTAATATGAGTCAACCAACGGCAGTACACTGGCATAGCTAC
ACCAGCCAGCCCGATAGGTCATGGGAGGGCAACTCCAAGGATGAACCAAC
ACCAGGAGTCAGCATTTCCGTAGAGGCGAACGAAGAGGTAACAATGGATA
CTGAGACCACGAAGCCGGATCAAGAGTCAACAAGGTCGGCACCAGCTGGA
CCGCGAAGCCTTGAGTCACCGCAAGCTGAACAAGAGTTGACTTTCCGGGA
CAGGGTTGATTACTGGCTTGGGTGGCGGGGCCCGGCCAACAGCGAGATTC
ACGGCGAGACTGTCGCGCAATCTTAA
back to top

Coding sequence (CDS) from alignment at ch6:3177592..3180667+

>KJC3_008828-T1 ID=KJC3_008828-T1|Name=KJC3_008828-T1|organism=Aspergillus niger KJC3|type=CDS|length=6000bp|location=Sequence derived from alignment at ch6:3177592..3180667+ (Aspergillus niger KJC3)
ATGTTGCCTTCCTTTTTGGGGGAAAATCCCAACTGGAGGTGGGATTCAAC
CGGCTTCTTCCCCTCGTTGACAGCCTCGCCTTCACTTCTCACTCCACAGT
TGCTAGCATTCACTCTTTCGGCCTTGCTCCCCACTTTGCTCTTACGATCA
TTTTGCCTACACGCAGCTGTGTTGTCTCTGTTGTCGTCCATCCGCGTCTG
CTCTGATATTCTTACCCCAACGCATCGTCAAACCACCACTGTCCTAATCA
TGGCTTCCTACAAAGACGGAAGCCGTCAAGTACCTCTGCTCCAGGCTTCT
CCAGAGGTTTCAAATTTGGACATTCGAAGTACCTGGAGCGGTAGCCTAGA
CGAGCCCGTCAACTGCAGAATCTCTATGGTGGTCCATTGTATTCCGAGCA
CGCAGCTATCTATCTTGAACATCCGATCTGCCGGGGTTTCTATCGTCAAT
ACACAGTTGGTTCGGCTTCAGCCTGACCAGTATAGTGACGGTACTTGGTC
AAGCTCGAGCTCCCCTCAGAGTCCTTTATTCGCCTTTTCTTCAACTACAA
CAGAGTCTTACCCTGCACATTCCCCGGTATCTGGCTCAGAGTCTTCTGGG
GGAAATGTGCCCGCAAATATCGAGAGTTCGGCTCAAAACTTGGTATCCTC
GGTCGATGGAACTGTTGAAAACCTCTCTATTTGCGATACTGGGCTCGATC
AGCTGGATCATCATTCGGCTCAAGTATCATCTGCGTCCGATCATAGCGAT
GAATATACTAGGTTTATAGATGCTATCAAGCAGCATAGTCTGGGAAAGAG
AAGTGCTGCAGCGGCAGGCCTGACGGAATCTCAGCCGGGCTCGGATACGG
AAGAGGGTCAAAGTAGGAAAGCGGCGCAGCAAAACCATATTGACAGAATT
AGTTCTACAAAATTTGAGCCCAAAAGGAGAGTGTCTGAGGGCTGGGCAAA
CCACAGTGGGCACTTGGTCTCCAACTCCCCGCTTCCCAGAGAAAAGCAGC
ATGAACCCCTCAGCGGAGAGTTCGTACCCCAGACTGACAACATAACACAA
AAAATATTTTCCGGCAGTACGCAAACCAAGGGTGTTAATAGTGCTTTTGA
GGTCAAGGACATAGCAAGTAGCATGAAGCTCGAAGCCAGTGATGCTGGTG
CTACTTTCGAGTCTTCACTAGCTCATTCAGACACAGGCAAAGAACCAGTT
CATGATCCTGAACAGCCAGAGGTTGCGGGGTCCGTCTTTGGTGAGGCTGA
TCCATGTTTCTCATTGATTGATGAAATGACACCGTTACCTGAGCCTTCAA
ATGAAGATACTACAAAAGTATCGGGCGAAGTGCGCAAAGACCCCTTCTGG
AAATGGTCAAATGCGGACTCAACACCATCCATTCCAGCTTTGAAAGAATC
GCCACTATCCAATTCTGACCCCGGAGAGGTACCTATGGTAGCTGAAATTG
AACCAGAGGAGATCGCAAAGGCTCGGCTACTTCCCAAGCTCACCATACCG
CAACCTTCTCATGGGAAGACTGCGGATGATAAGGAGACCTCCCCGCAAAG
TCATGATGACGAGTCACGCGCAGATGTACACTGCGAACCAGTATTTGATA
TTAACCGTGGTATTCTAATAGTCAAGAATCCTTCCAATGTCCAGCCAGAA
CACTACAAGCTCATTGTTACCATATCTGTGTCTCTGCGGCAAAGAAAGCA
AAGCGGATGGAATGACTTAGTTATCCAAGGCCTACCTAAGTTGGTACCTG
GCGAGTACGGATACCTCCTTTTCCTCATGCCAGAGGAATATGGTCTCGAG
TTCCGTACGACGAACTTACAGAGGCATAAGATCGTGGAAAATTGCTTCCT
GGGTGAGTTCAGCTATACGGGTGACCTTGTGATCCCTGTTCGAAGGTGCG
AGCGGAAGTTTTACGGAGTTGTCAAGGACTTTACGGTACACCAGGAAATC
AGGGCCGAATATGCATTGGCCTCTGTCAAAGTAGAAAGTCCGCCAGAATT
ACAAGCAACATACCACGCTGTTTGCTCTGTCAGACTGCACAATCGTTGCT
TTTGGGCCGAAACATGCTGTCTCATTCTGTCCATCGATGGGGGACCAGAT
AGTGTTTTCCGCAGTAAACTTGATTCTCAAGAAAGCGGTCTGAAGATGAT
CCATATCCCAGCAAGAGAGAATGTCGGTATTGGATCTGCGTATCTACAGA
TCGTTTGCTCGCCCCGAGATCTTGAATTGTTCTGTGTGAACTGGACAGTT
CGGCTTCCCGGGCACCATGCAATCAGTTGGCTCCCACGAATTTACCCGGC
ATTTTCCAGCCCCAGTGACCGTGTTAGACATCATCTCCGACGGACATTTG
AGAAAGTGGAGGCTGTATCACTTTCACGCATTGAGCGTTCTCGTGGCTAC
GAAATGGGGGAACCTGAGATCGATGACTCGAAAGAGCCCGCAGGTATAAG
AGATGCCATTGCTATCGTGGCGGACCTGCCTGCTACGGACAAACAGCCAA
TGAATAACTCCGCGAATATTCCGAGATCAGAGAACGTTATACAAAAGATG
AGACTCGTTTTCATTTGCGCTATCTATGTTCTGGGAACAATTCTTGCGTT
CTGGCTCAATAATACCGTTATTGACGCTGTGGCTTCACCAACTAAGGCGA
CATCCACTGTTGCTAATATGGATGCGGAAAGCCTTAATATGAGTCAACCA
ACGGCAGTACACTGGCATAGCTACACCAGCCAGCCCGATAGGTCATGGGA
GGGCAACTCCAAGGATGAACCAACACCAGGAGTCAGCATTTCCGTAGAGG
CGAACGAAGAGGTAACAATGGATACTGAGACCACGAAGCCGGATCAAGAG
TCAACAAGGTCGGCACCAGCTGGACCGCGAAGCCTTGAGTCACCGCAAGC
TGAACAAGAGTTGACTTTCCGGGACAGGGTTGATTACTGGCTTGGGTGGC
GGGGCCCGGCCAACAGCGAGATTCACGGCGAGACTGTCGCGCAATCTTAA
ATGTTGCCTTCCTTTTTGGGGGAAAATCCCAACTGGAGGTGGGATTCAAC
CGGCTTCTTCCCCTCGTTGACAGCCTCGCCTTCACTTCTCACTCCACAGT
TGCTAGCATTCACTCTTTCGGCCTTGCTCCCCACTTTGCTCTTACGATCA
TTTTGCCTACACGCAGCTGTGTTGTCTCTGTTGTCGTCCATCCGCGTCTG
CTCTGATATTCTTACCCCAACGCATCGTCAAACCACCACTGTCCTAATCA
TGGCTTCCTACAAAGACGGAAGCCGTCAAGTACCTCTGCTCCAGGCTTCT
CCAGAGGTTTCAAATTTGGACATTCGAAGTACCTGGAGCGGTAGCCTAGA
CGAGCCCGTCAACTGCAGAATCTCTATGGTGGTCCATTGTATTCCGAGCA
CGCAGCTATCTATCTTGAACATCCGATCTGCCGGGGTTTCTATCGTCAAT
ACACAGTTGGTTCGGCTTCAGCCTGACCAGTATAGTGACGGTACTTGGTC
AAGCTCGAGCTCCCCTCAGAGTCCTTTATTCGCCTTTTCTTCAACTACAA
CAGAGTCTTACCCTGCACATTCCCCGGTATCTGGCTCAGAGTCTTCTGGG
GGAAATGTGCCCGCAAATATCGAGAGTTCGGCTCAAAACTTGGTATCCTC
GGTCGATGGAACTGTTGAAAACCTCTCTATTTGCGATACTGGGCTCGATC
AGCTGGATCATCATTCGGCTCAAGTATCATCTGCGTCCGATCATAGCGAT
GAATATACTAGGTTTATAGATGCTATCAAGCAGCATAGTCTGGGAAAGAG
AAGTGCTGCAGCGGCAGGCCTGACGGAATCTCAGCCGGGCTCGGATACGG
AAGAGGGTCAAAGTAGGAAAGCGGCGCAGCAAAACCATATTGACAGAATT
AGTTCTACAAAATTTGAGCCCAAAAGGAGAGTGTCTGAGGGCTGGGCAAA
CCACAGTGGGCACTTGGTCTCCAACTCCCCGCTTCCCAGAGAAAAGCAGC
ATGAACCCCTCAGCGGAGAGTTCGTACCCCAGACTGACAACATAACACAA
AAAATATTTTCCGGCAGTACGCAAACCAAGGGTGTTAATAGTGCTTTTGA
GGTCAAGGACATAGCAAGTAGCATGAAGCTCGAAGCCAGTGATGCTGGTG
CTACTTTCGAGTCTTCACTAGCTCATTCAGACACAGGCAAAGAACCAGTT
CATGATCCTGAACAGCCAGAGGTTGCGGGGTCCGTCTTTGGTGAGGCTGA
TCCATGTTTCTCATTGATTGATGAAATGACACCGTTACCTGAGCCTTCAA
ATGAAGATACTACAAAAGTATCGGGCGAAGTGCGCAAAGACCCCTTCTGG
AAATGGTCAAATGCGGACTCAACACCATCCATTCCAGCTTTGAAAGAATC
GCCACTATCCAATTCTGACCCCGGAGAGGTACCTATGGTAGCTGAAATTG
AACCAGAGGAGATCGCAAAGGCTCGGCTACTTCCCAAGCTCACCATACCG
CAACCTTCTCATGGGAAGACTGCGGATGATAAGGAGACCTCCCCGCAAAG
TCATGATGACGAGTCACGCGCAGATGTACACTGCGAACCAGTATTTGATA
TTAACCGTGGTATTCTAATAGTCAAGAATCCTTCCAATGTCCAGCCAGAA
CACTACAAGCTCATTGTTACCATATCTGTGTCTCTGCGGCAAAGAAAGCA
AAGCGGATGGAATGACTTAGTTATCCAAGGCCTACCTAAGTTGGTACCTG
GCGAGTACGGATACCTCCTTTTCCTCATGCCAGAGGAATATGGTCTCGAG
TTCCGTACGACGAACTTACAGAGGCATAAGATCGTGGAAAATTGCTTCCT
GGGTGAGTTCAGCTATACGGGTGACCTTGTGATCCCTGTTCGAAGGTGCG
AGCGGAAGTTTTACGGAGTTGTCAAGGACTTTACGGTACACCAGGAAATC
AGGGCCGAATATGCATTGGCCTCTGTCAAAGTAGAAAGTCCGCCAGAATT
ACAAGCAACATACCACGCTGTTTGCTCTGTCAGACTGCACAATCGTTGCT
TTTGGGCCGAAACATGCTGTCTCATTCTGTCCATCGATGGGGGACCAGAT
AGTGTTTTCCGCAGTAAACTTGATTCTCAAGAAAGCGGTCTGAAGATGAT
CCATATCCCAGCAAGAGAGAATGTCGGTATTGGATCTGCGTATCTACAGA
TCGTTTGCTCGCCCCGAGATCTTGAATTGTTCTGTGTGAACTGGACAGTT
CGGCTTCCCGGGCACCATGCAATCAGTTGGCTCCCACGAATTTACCCGGC
ATTTTCCAGCCCCAGTGACCGTGTTAGACATCATCTCCGACGGACATTTG
AGAAAGTGGAGGCTGTATCACTTTCACGCATTGAGCGTTCTCGTGGCTAC
GAAATGGGGGAACCTGAGATCGATGACTCGAAAGAGCCCGCAGGTATAAG
AGATGCCATTGCTATCGTGGCGGACCTGCCTGCTACGGACAAACAGCCAA
TGAATAACTCCGCGAATATTCCGAGATCAGAGAACGTTATACAAAAGATG
AGACTCGTTTTCATTTGCGCTATCTATGTTCTGGGAACAATTCTTGCGTT
CTGGCTCAATAATACCGTTATTGACGCTGTGGCTTCACCAACTAAGGCGA
CATCCACTGTTGCTAATATGGATGCGGAAAGCCTTAATATGAGTCAACCA
ACGGCAGTACACTGGCATAGCTACACCAGCCAGCCCGATAGGTCATGGGA
GGGCAACTCCAAGGATGAACCAACACCAGGAGTCAGCATTTCCGTAGAGG
CGAACGAAGAGGTAACAATGGATACTGAGACCACGAAGCCGGATCAAGAG
TCAACAAGGTCGGCACCAGCTGGACCGCGAAGCCTTGAGTCACCGCAAGC
TGAACAAGAGTTGACTTTCCGGGACAGGGTTGATTACTGGCTTGGGTGGC
GGGGCCCGGCCAACAGCGAGATTCACGGCGAGACTGTCGCGCAATCTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008828KJC3_008828Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008828-T1.utr5p1KJC3_008828-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008828-T1.exon1KJC3_008828-T1.exon1Aspergillus niger KJC3exon
KJC3_008828-T1.exon2KJC3_008828-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008828-T1.cdsKJC3_008828-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008828-T1KJC3_008828-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3177592..3180667 +
Powered by Drupal