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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3180059..3181878- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008829-T1 ID=KJC3_008829-T1|Name=KJC3_008829-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1820bp|location=Sequence derived from alignment at ch6:3180059..3181878- (Aspergillus niger KJC3)
CTTCCCAATTCCCCAACGTCCACAGCCCAAAATGCCCCCACCTCCTGAAA
GACAAAAAACAACCATAGTCGCCATCTCCGGCCCCTCCAGCAGCGGCAAA
ACCACCCTCGCGCGCCTCCTCCAGCGCATCTTCTCCAAACTAACCCCGCA
GGCAACAAACACAACCACGAACACGAACCTACGAACATTCATCGTCCACG
AAGACGACTTTTACCACCCAGATGACAAGTACATTTCCCATACCTTCTAT
ATCCATCTCATCTAATAACAAAAACCAACAGAATCCCCCTAATTCCCCAC
CCGCGCGACCCCACCACGCAGATCCAAAACTGGGACACTCTTTCCGCGCT
CGACATCCCCTTCCTCAGCGCATCACTATCCTACATCCATGCGCATGGAC
ACCTCCCGCCACGCTTACGCTCCAAGGAGGATTTGAACGATGTGGCCGAG
TCCGGGGTGTCAGAGGAGGTTGTTTCTCGGATGAGGGAGGTGGTTAGGGG
GCGAGTACCTTCCTACTTTCTGGAGGATAATACCAACTCTGTTTCTGGGG
ATGGTGTCAGGACAATCGTCTTTCTGGAGGGTTTCCTGTTATTCGCACCC
CCGAAGGAGGAAGATCCGCGGCATGGGTTGAGGGATGTGCAGGAGAAGAT
GGACGTGAGGTTGTTTTTGCCGGCGAGGTATGACAATGTGAAGGAGAGGA
GGGAGGGGAGGAGTGGGTATGTGACTATTGGGCCGGCGCCGGTGCAGCAG
GGTGGTGGTGGTGGTACGGAGTTGCCGCAGAGAGGGTCAGTGGAGGTGGA
TTTGGAGGAGGAGGATGATCGGCCGCCGCAGAGTTTCTGGGAGGATCCGC
CGGGATATGTTGATGATATTGTGTGGCCTAATTATGTGCAGGATCATGCG
TGGTTGTTGTTGCCGGAGGGGGAAGAAGGGTCGGCTCAGACGGCATGGAA
GGATGCGGACACGCAGGAGCTGGTCAGGTTGGTGGGACAGGGAGTGAATC
TCAGATTGGATACAGGTGTAACGGTGGCTCCTGGACAAGGAAAGGCGTCC
ATGACAGACATCCTCGAGTGGGCTGTCGAGGAAGTACTCAAGCATATTGC
GGAAACAGAAGGACAATGAGAACCTGGTTCATCTGTAGTACCTAACTACA
CAGGGTACCTCCCCGAAGCCATTTTTTCACATTAATATCAGTACCTATTC
TTCCTGCCCTCTTAAGATTGCGCGACAGTCTCGCCGTGAATCTCGCTGTT
GGCCGGGCCCCGCCACCCAAGCCAGTAATCAACCCTGTCCCGGAAAGTCA
ACTCTTGTTCAGCTTGCGGTGACTCAAGGCTTCGCGGTCCAGCTGGTGCC
GACCTTGTTGACTCTTGATCCGGCTTCGTGGTCTCAGTATCCATTGTTAC
CTCTTCGTTCGCCTCTACGGAAATGCTGACTCCTGGTGTTGGTTCATCCT
TGGAGTTGCCCTCCCATGACCTATCGGGCTGGCTGGTGTAGCTATGCCAG
TGTACTGCCGTTGGTTGACTCATATTAAGGCTTTCCGCATCCATATTAGC
AACAGTGGATGTCGCCTTAGTTGGTGAAGCCACAGCGTCAATAACGGTAT
TATTGAGCCAGAACGCAAGAATTGTTCCCAGAACATAGATAGCGCAAATG
AAAACGAGTCTCATCTTTTGTATAACGTTCTCTGATCTCGGAATATTCGC
GGAGTTATTCATTGGCTGTTTGTCCGTAGCAGGCAGGTCCGCCACGATAG
CAATGGCATCTCTTATACCTGCGGGCTCTTTCGAGTCATCGATCTCAGGT
TCCCCCATTTCGTAGCCACG back to topCoding sequence (CDS) from alignment at ch6:3180059..3181878- >KJC3_008829-T1 ID=KJC3_008829-T1|Name=KJC3_008829-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch6:3180059..3181878- (Aspergillus niger KJC3)
AATCCCCCTAATTCCCCACCCGCGCGACCCCACCACGCAGATCCAAAACT
GGGACACTCTTTCCGCGCTCGACATCCCCTTCCTCAGCGCATCACTATCC
TACATCCATGCGCATGGACACCTCCCGCCACGCTTACGCTCCAAGGAGGA
TTTGAACGATGTGGCCGAGTCCGGGGTGTCAGAGGAGGTTGTTTCTCGGA
TGAGGGAGGTGGTTAGGGGGCGAGTACCTTCCTACTTTCTGGAGGATAAT
ACCAACTCTGTTTCTGGGGATGGTGTCAGGACAATCGTCTTTCTGGAGGG
TTTCCTGTTATTCGCACCCCCGAAGGAGGAAGATCCGCGGCATGGGTTGA
GGGATGTGCAGGAGAAGATGGACGTGAGGTTGTTTTTGCCGGCGAGGTAT
GACAATGTGAAGGAGAGGAGGGAGGGGAGGAGTGGGTATGTGACTATTGG
GCCGGCGCCGGTGCAGCAGGGTGGTGGTGGTGGTACGGAGTTGCCGCAGA
GAGGGTCAGTGGAGGTGGATTTGGAGGAGGAGGATGATCGGCCGCCGCAG
AGTTTCTGGGAGGATCCGCCGGGATATGTTGATGATATTGTGTGGCCTAA
TTATGTGCAGGATCATGCGTGGTTGTTGTTGCCGGAGGGGGAAGAAGGGT
CGGCTCAGACGGCATGGAAGGATGCGGACACGCAGGAGCTGGTCAGGTTG
GTGGGACAGGGAGTGAATCTCAGATTGGATACAGGTGTAACGGTGGCTCC
TGGACAAGGAAAGGCGTCCATGACAGACATCCTCGAGTGGGCTGTCGAGG
AAGTACTCAAGCATATTGCGGAAACAGAAGGACAATGAATGCCCCCACCT
CCTGAAAGACAAAAAACAACCATAGTCGCCATCTCCGGCCCCTCCAGCAG
CGGCAAAACCACCCTCGCGCGCCTCCTCCAGCGCATCTTCTCCAAACTAA
CCCCGCAGGCAACAAACACAACCACGAACACGAACCTACGAACATTCATC
GTCCACGAAGACGACTTTTACCACCCAGATGACAAAATCCCCCTAATTCC
CCACCCGCGCGACCCCACCACGCAGATCCAAAACTGGGACACTCTTTCCG
CGCTCGACATCCCCTTCCTCAGCGCATCACTATCCTACATCCATGCGCAT
GGACACCTCCCGCCACGCTTACGCTCCAAGGAGGATTTGAACGATGTGGC
CGAGTCCGGGGTGTCAGAGGAGGTTGTTTCTCGGATGAGGGAGGTGGTTA
GGGGGCGAGTACCTTCCTACTTTCTGGAGGATAATACCAACTCTGTTTCT
GGGGATGGTGTCAGGACAATCGTCTTTCTGGAGGGTTTCCTGTTATTCGC
ACCCCCGAAGGAGGAAGATCCGCGGCATGGGTTGAGGGATGTGCAGGAGA
AGATGGACGTGAGGTTGTTTTTGCCGGCGAGGTATGACAATGTGAAGGAG
AGGAGGGAGGGGAGGAGTGGGTATGTGACTATTGGGCCGGCGCCGGTGCA
GCAGGGTGGTGGTGGTGGTACGGAGTTGCCGCAGAGAGGGTCAGTGGAGG
TGGATTTGGAGGAGGAGGATGATCGGCCGCCGCAGAGTTTCTGGGAGGAT
CCGCCGGGATATGTTGATGATATTGTGTGGCCTAATTATGTGCAGGATCA
TGCGTGGTTGTTGTTGCCGGAGGGGGAAGAAGGGTCGGCTCAGACGGCAT
GGAAGGATGCGGACACGCAGGAGCTGGTCAGGTTGGTGGGACAGGGAGTG
AATCTCAGATTGGATACAGGTGTAACGGTGGCTCCTGGACAAGGAAAGGC
GTCCATGACAGACATCCTCGAGTGGGCTGTCGAGGAAGTACTCAAGCATA
TTGCGGAAACAGAAGGACAATGAATGCCCCCACCTCCTGAAAGACAAAAA
ACAACCATAGTCGCCATCTCCGGCCCCTCCAGCAGCGGCAAAACCACCCT
CGCGCGCCTCCTCCAGCGCATCTTCTCCAAACTAACCCCGCAGGCAACAA
ACACAACCACGAACACGAACCTACGAACATTCATCGTCCACGAAGACGAC
TTTTACCACCCAGATGACAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008829-T1.utr3p1 | KJC3_008829-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008829-T1.utr5p1 | KJC3_008829-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264DMU |
| DBxref | InterPro:IPR027417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3180059..3181878 - |
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