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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3224543..3225546- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008841-T1 ID=KJC3_008841-T1|Name=KJC3_008841-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1004bp|location=Sequence derived from alignment at ch6:3224543..3225546- (Aspergillus niger KJC3)
CTATCTCGTCCGCTGCTGCTGTGCTCTGCCGGCGCCTGTTCTTCTCTTCC
CCGGTCGATTCCCTGTCATGGTCGACTGCCTACCGACCTTTTGATCTACA
CAATGGCGGGTTTACAGACTCGTTCGACCATGTCCCTTCCGTTCTCCCTC
TCTGCGGCTTTTCGCAACCTTTCCGTCACGACCCCCAAACGTTCCTTCTC
CACGACATTGGCGGCACAGAAGACGAAACAATTGCCGGATTACATCCCTC
CTTACCCCTACGGTCCGAACTATGTCTTCAAGCAGTCCAACTCTGGTCTC
TACGGAGGCGCGATGATCCAATTCGGAAACAAGATCTCACAAGGCCGCAA
TGAGGGCAAGACCCGCCGATTCTGGAAGCCCAACGTTCGTCGGAAGAAGC
TCTACAGCGAAGCACTCGGAGAGGACCTTTTCATCAAGGTCACGCGCAAA
GCGCTGCGCACGATCCGGAAGGCCGGTGGCCTCGACAACTACCTTCTGAG
CGACCGCCCGGGCCGTATCAGGGAGATGGGTATCTTTGGCTGGGAGTTGC
GGTGGAAGATAATGCAGACGCCCAAGATTCAAGAGAGATTCCGGGAAGAG
CGGAAAAAGCTGGGTATACCCGAACCTCCTACGTTCGAGGAGTGGGTGAA
GCAGAAGGAGGACGAGATCAAGGCGAAGGTGGAGGAGGAGACGAATATCA
AGGAGATCACGAAGCCAACGTACAACGAGAAACAGTACTAGAGACTTACA
GGGCATGTCTCTAGCAAAGTCGATTTGGGACGGTCAATTTCGGTTGATTA
TCTGGTGACCAACGGATGGGCGTCTGTTGTATTATTATTTCTTTGGTCAT
GGTCGACAGCGTCTGCATACCGCTTTCATATATCTCGGATGGTGAAAAAG
ACGACTGTACAGCTACTATTTAGATCTTGCATGGACTGCTTGGATTTGCG
TGATTCGCTCTTCAGTGTATTTATATGTTACCAATGCAATTTGGATTAAT
TGAC back to topCoding sequence (CDS) from alignment at ch6:3224543..3225546- >KJC3_008841-T1 ID=KJC3_008841-T1|Name=KJC3_008841-T1|organism=Aspergillus niger KJC3|type=CDS|length=639bp|location=Sequence derived from alignment at ch6:3224543..3225546- (Aspergillus niger KJC3)
ATGGCGGGTTTACAGACTCGTTCGACCATGTCCCTTCCGTTCTCCCTCTC
TGCGGCTTTTCGCAACCTTTCCGTCACGACCCCCAAACGTTCCTTCTCCA
CGACATTGGCGGCACAGAAGACGAAACAATTGCCGGATTACATCCCTCCT
TACCCCTACGGTCCGAACTATGTCTTCAAGCAGTCCAACTCTGGTCTCTA
CGGAGGCGCGATGATCCAATTCGGAAACAAGATCTCACAAGGCCGCAATG
AGGGCAAGACCCGCCGATTCTGGAAGCCCAACGTTCGTCGGAAGAAGCTC
TACAGCGAAGCACTCGGAGAGGACCTTTTCATCAAGGTCACGCGCAAAGC
GCTGCGCACGATCCGGAAGGCCGGTGGCCTCGACAACTACCTTCTGAGCG
ACCGCCCGGGCCGTATCAGGGAGATGGGTATCTTTGGCTGGGAGTTGCGG
TGGAAGATAATGCAGACGCCCAAGATTCAAGAGAGATTCCGGGAAGAGCG
GAAAAAGCTGGGTATACCCGAACCTCCTACGTTCGAGGAGTGGGTGAAGC
AGAAGGAGGACGAGATCAAGGCGAAGGTGGAGGAGGAGACGAATATCAAG
GAGATCACGAAGCCAACGTACAACGAGAAACAGTACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008841-T1.utr3p1 | KJC3_008841-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008841-T1.utr5p1 | KJC3_008841-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263ZBJ |
| DBxref | InterPro:IPR034704 |
| DBxref | InterPro:IPR026569 |
| DBxref | InterPro:IPR037147 |
| DBxref | PFAM:PF00830 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3224543..3225546 - |
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