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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3227722..3229412- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008843-T1 ID=KJC3_008843-T1|Name=KJC3_008843-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1691bp|location=Sequence derived from alignment at ch6:3227722..3229412- (Aspergillus niger KJC3)
ATGCCGCTCTTTCAGCCTGAGCGTGTTGCTGTTATAGGGGGCGGTTGCAC
GGGTATCACGACCTTCTGGGCGTTGCGGAATTCCACCCATGATGTCCATC
TCTTTGAAGCCTCGGACTCTCTTGGTGGGCGCGTAAAGGCCCTGCCTTTT
GAGCATAATGATCACCGAGTTGATGTCAATACAAGTCCTCCCACTTTCAA
TGCAGGGACTTCTCGTTAGTGGCAATCTCCGAGCCCGTATCTTTCTTGAC
TAATTCACACCTTCAGCCAACCTCGTTTCGTTGTTAGACCACCTCGGGAT
TACCGGTGTCAAGGCTCCGTTCTCCTTTGGGGCTACAGATGGGATTGACA
GTTTCCAATGGTGTGGTAGCGTACTGAAAAGTATACTTCTTCGTCCATGG
ACGCTTTGCAACTTTGAGACCTATCGCATACTGTGCGATGTTATTTGGAT
GAGATACATGGCCGTGGACGTACTTGATCACGGCTTTGAGGCTTGTAACC
CCACCGACGCCCAGTCATTATCTATGCATGAGTACCTCGCAGGCGAAGAG
TACTCCAATATCTTTATCGAGAACTACCTAGCTCCACTGCTGTCCATGCT
GTGGAGCACAAATGCGGGGAGATTTCTGCCACGGGTGCCTGCGAAAGCTC
TCGTCCAGGCTCTGTGTGATCATCAGCTGCTGAGGCCCCGTCAAGCCTTG
CCAGACTGGCGTCGTATCGGACCAGGGGTGAGTCATTTCATCCAGACCAT
GACGAAAAGCTTCCCCTCCTCCAAGGTCCATCTTAAGACCAGAGTAAGGG
AGGTCGTTCAGTATGGAAAGAAGTATGGTATCATGACATCTGCGGGCGAA
GAAATGTTCTTCAACCATATCGTCTTCGCCGTGAACGGCCAGGAGACTAT
CAAGATATTGGGAACGCCCGCAAACGAGCAAGAAAAGGAGATCATGCGAA
GCTTGGGATCAACCCGAAACATTTCTGTTTTACATTCAGACCCTCTTGTA
AGTCATAACCGCTTATATATAATCTCCTACTAACCGCACAAACCAGCTCA
TGCCCAACGTCGAGGACCCCGGCCCCGCCTGCAACTACATCCTAGGCCCC
AGCAACCAAGACTGGCCAACCCAACCAAGCAACAACACCACTACCACCAC
ATCCCACATCTCCAGCCTCAGCTACATCGCCAACTTCCTCGACAGCATTC
CATTCCACCTTTTCGGCCCCATCTACATCACATTGAACCCCTTCACTCCA
CCCCACCCAAGCCAAGTGCAAGGTGTATGGGAGTTCACCGACCCCGAACC
AAGCGCCCAGACCCTGATAGCACAACACCATCTCCCCTCCATCCAGAACA
AGCGTGGTCTGAGTTACGGTTTCTGCTGGACAGGACGCGGACACTTAGAA
GATGCCATCACGGCTGGTCTTAGAATCGCCATTCAGGACCTAGGCGCCGA
GGCTCCATTCCACGTGAAATTCCACCAGGATCCTCTGGAGGCGGCGGCTT
CAGGGCCCCCGGGCCTCGGCTTGAGAGATAATGCGATCCGGACGATTATT
CGTTTGGTTCATGTTTATGTTCTCATTATGAGACTCGTTTTGGTTTTGTT
TAGAGCTTTGCCGGGTGCAGCTGTGAAGGCGAAGACAAGATTTAGACCGA
TGTGCAATGCTGCTGCTGCTAGTAAGGAGAAGACTTCTTGA back to topCoding sequence (CDS) from alignment at ch6:3227722..3229412- >KJC3_008843-T1 ID=KJC3_008843-T1|Name=KJC3_008843-T1|organism=Aspergillus niger KJC3|type=CDS|length=4770bp|location=Sequence derived from alignment at ch6:3227722..3229412- (Aspergillus niger KJC3)
CTCATGCCCAACGTCGAGGACCCCGGCCCCGCCTGCAACTACATCCTAGG
CCCCAGCAACCAAGACTGGCCAACCCAACCAAGCAACAACACCACTACCA
CCACATCCCACATCTCCAGCCTCAGCTACATCGCCAACTTCCTCGACAGC
ATTCCATTCCACCTTTTCGGCCCCATCTACATCACATTGAACCCCTTCAC
TCCACCCCACCCAAGCCAAGTGCAAGGTGTATGGGAGTTCACCGACCCCG
AACCAAGCGCCCAGACCCTGATAGCACAACACCATCTCCCCTCCATCCAG
AACAAGCGTGGTCTGAGTTACGGTTTCTGCTGGACAGGACGCGGACACTT
AGAAGATGCCATCACGGCTGGTCTTAGAATCGCCATTCAGGACCTAGGCG
CCGAGGCTCCATTCCACGTGAAATTCCACCAGGATCCTCTGGAGGCGGCG
GCTTCAGGGCCCCCGGGCCTCGGCTTGAGAGATAATGCGATCCGGACGAT
TATTCGTTTGGTTCATGTTTATGTTCTCATTATGAGACTCGTTTTGGTTT
TGTTTAGAGCTTTGCCGGGTGCAGCTGTGAAGGCGAAGACAAGATTTAGA
CCGATGTGCAATGCTGCTGCTGCTAGTAAGGAGAAGACTTCTTGACCAAC
CTCGTTTCGTTGTTAGACCACCTCGGGATTACCGGTGTCAAGGCTCCGTT
CTCCTTTGGGGCTACAGATGGGATTGACAGTTTCCAATGGTGTGGTAGCG
TACTGAAAAGTATACTTCTTCGTCCATGGACGCTTTGCAACTTTGAGACC
TATCGCATACTGTGCGATGTTATTTGGATGAGATACATGGCCGTGGACGT
ACTTGATCACGGCTTTGAGGCTTGTAACCCCACCGACGCCCAGTCATTAT
CTATGCATGAGTACCTCGCAGGCGAAGAGTACTCCAATATCTTTATCGAG
AACTACCTAGCTCCACTGCTGTCCATGCTGTGGAGCACAAATGCGGGGAG
ATTTCTGCCACGGGTGCCTGCGAAAGCTCTCGTCCAGGCTCTGTGTGATC
ATCAGCTGCTGAGGCCCCGTCAAGCCTTGCCAGACTGGCGTCGTATCGGA
CCAGGGGTGAGTCATTTCATCCAGACCATGACGAAAAGCTTCCCCTCCTC
CAAGGTCCATCTTAAGACCAGAGTAAGGGAGGTCGTTCAGTATGGAAAGA
AGTATGGTATCATGACATCTGCGGGCGAAGAAATGTTCTTCAACCATATC
GTCTTCGCCGTGAACGGCCAGGAGACTATCAAGATATTGGGAACGCCCGC
AAACGAGCAAGAAAAGGAGATCATGCGAAGCTTGGGATCAACCCGAAACA
TTTCTGTTTTACATTCAGACCCTCTTATGCCGCTCTTTCAGCCTGAGCGT
GTTGCTGTTATAGGGGGCGGTTGCACGGGTATCACGACCTTCTGGGCGTT
GCGGAATTCCACCCATGATGTCCATCTCTTTGAAGCCTCGGACTCTCTTG
GTGGGCGCGTAAAGGCCCTGCCTTTTGAGCATAATGATCACCGAGTTGAT
GTCAATACAAGTCCTCCCACTTTCAATGCAGGGACTTCTCCTCATGCCCA
ACGTCGAGGACCCCGGCCCCGCCTGCAACTACATCCTAGGCCCCAGCAAC
CAAGACTGGCCAACCCAACCAAGCAACAACACCACTACCACCACATCCCA
CATCTCCAGCCTCAGCTACATCGCCAACTTCCTCGACAGCATTCCATTCC
ACCTTTTCGGCCCCATCTACATCACATTGAACCCCTTCACTCCACCCCAC
CCAAGCCAAGTGCAAGGTGTATGGGAGTTCACCGACCCCGAACCAAGCGC
CCAGACCCTGATAGCACAACACCATCTCCCCTCCATCCAGAACAAGCGTG
GTCTGAGTTACGGTTTCTGCTGGACAGGACGCGGACACTTAGAAGATGCC
ATCACGGCTGGTCTTAGAATCGCCATTCAGGACCTAGGCGCCGAGGCTCC
ATTCCACGTGAAATTCCACCAGGATCCTCTGGAGGCGGCGGCTTCAGGGC
CCCCGGGCCTCGGCTTGAGAGATAATGCGATCCGGACGATTATTCGTTTG
GTTCATGTTTATGTTCTCATTATGAGACTCGTTTTGGTTTTGTTTAGAGC
TTTGCCGGGTGCAGCTGTGAAGGCGAAGACAAGATTTAGACCGATGTGCA
ATGCTGCTGCTGCTAGTAAGGAGAAGACTTCTTGACCAACCTCGTTTCGT
TGTTAGACCACCTCGGGATTACCGGTGTCAAGGCTCCGTTCTCCTTTGGG
GCTACAGATGGGATTGACAGTTTCCAATGGTGTGGTAGCGTACTGAAAAG
TATACTTCTTCGTCCATGGACGCTTTGCAACTTTGAGACCTATCGCATAC
TGTGCGATGTTATTTGGATGAGATACATGGCCGTGGACGTACTTGATCAC
GGCTTTGAGGCTTGTAACCCCACCGACGCCCAGTCATTATCTATGCATGA
GTACCTCGCAGGCGAAGAGTACTCCAATATCTTTATCGAGAACTACCTAG
CTCCACTGCTGTCCATGCTGTGGAGCACAAATGCGGGGAGATTTCTGCCA
CGGGTGCCTGCGAAAGCTCTCGTCCAGGCTCTGTGTGATCATCAGCTGCT
GAGGCCCCGTCAAGCCTTGCCAGACTGGCGTCGTATCGGACCAGGGGTGA
GTCATTTCATCCAGACCATGACGAAAAGCTTCCCCTCCTCCAAGGTCCAT
CTTAAGACCAGAGTAAGGGAGGTCGTTCAGTATGGAAAGAAGTATGGTAT
CATGACATCTGCGGGCGAAGAAATGTTCTTCAACCATATCGTCTTCGCCG
TGAACGGCCAGGAGACTATCAAGATATTGGGAACGCCCGCAAACGAGCAA
GAAAAGGAGATCATGCGAAGCTTGGGATCAACCCGAAACATTTCTGTTTT
ACATTCAGACCCTCTTATGCCGCTCTTTCAGCCTGAGCGTGTTGCTGTTA
TAGGGGGCGGTTGCACGGGTATCACGACCTTCTGGGCGTTGCGGAATTCC
ACCCATGATGTCCATCTCTTTGAAGCCTCGGACTCTCTTGGTGGGCGCGT
AAAGGCCCTGCCTTTTGAGCATAATGATCACCGAGTTGATGTCAATACAA
GTCCTCCCACTTTCAATGCAGGGACTTCTCCTCATGCCCAACGTCGAGGA
CCCCGGCCCCGCCTGCAACTACATCCTAGGCCCCAGCAACCAAGACTGGC
CAACCCAACCAAGCAACAACACCACTACCACCACATCCCACATCTCCAGC
CTCAGCTACATCGCCAACTTCCTCGACAGCATTCCATTCCACCTTTTCGG
CCCCATCTACATCACATTGAACCCCTTCACTCCACCCCACCCAAGCCAAG
TGCAAGGTGTATGGGAGTTCACCGACCCCGAACCAAGCGCCCAGACCCTG
ATAGCACAACACCATCTCCCCTCCATCCAGAACAAGCGTGGTCTGAGTTA
CGGTTTCTGCTGGACAGGACGCGGACACTTAGAAGATGCCATCACGGCTG
GTCTTAGAATCGCCATTCAGGACCTAGGCGCCGAGGCTCCATTCCACGTG
AAATTCCACCAGGATCCTCTGGAGGCGGCGGCTTCAGGGCCCCCGGGCCT
CGGCTTGAGAGATAATGCGATCCGGACGATTATTCGTTTGGTTCATGTTT
ATGTTCTCATTATGAGACTCGTTTTGGTTTTGTTTAGAGCTTTGCCGGGT
GCAGCTGTGAAGGCGAAGACAAGATTTAGACCGATGTGCAATGCTGCTGC
TGCTAGTAAGGAGAAGACTTCTTGACCAACCTCGTTTCGTTGTTAGACCA
CCTCGGGATTACCGGTGTCAAGGCTCCGTTCTCCTTTGGGGCTACAGATG
GGATTGACAGTTTCCAATGGTGTGGTAGCGTACTGAAAAGTATACTTCTT
CGTCCATGGACGCTTTGCAACTTTGAGACCTATCGCATACTGTGCGATGT
TATTTGGATGAGATACATGGCCGTGGACGTACTTGATCACGGCTTTGAGG
CTTGTAACCCCACCGACGCCCAGTCATTATCTATGCATGAGTACCTCGCA
GGCGAAGAGTACTCCAATATCTTTATCGAGAACTACCTAGCTCCACTGCT
GTCCATGCTGTGGAGCACAAATGCGGGGAGATTTCTGCCACGGGTGCCTG
CGAAAGCTCTCGTCCAGGCTCTGTGTGATCATCAGCTGCTGAGGCCCCGT
CAAGCCTTGCCAGACTGGCGTCGTATCGGACCAGGGGTGAGTCATTTCAT
CCAGACCATGACGAAAAGCTTCCCCTCCTCCAAGGTCCATCTTAAGACCA
GAGTAAGGGAGGTCGTTCAGTATGGAAAGAAGTATGGTATCATGACATCT
GCGGGCGAAGAAATGTTCTTCAACCATATCGTCTTCGCCGTGAACGGCCA
GGAGACTATCAAGATATTGGGAACGCCCGCAAACGAGCAAGAAAAGGAGA
TCATGCGAAGCTTGGGATCAACCCGAAACATTTCTGTTTTACATTCAGAC
CCTCTTATGCCGCTCTTTCAGCCTGAGCGTGTTGCTGTTATAGGGGGCGG
TTGCACGGGTATCACGACCTTCTGGGCGTTGCGGAATTCCACCCATGATG
TCCATCTCTTTGAAGCCTCGGACTCTCTTGGTGGGCGCGTAAAGGCCCTG
CCTTTTGAGCATAATGATCACCGAGTTGATGTCAATACAAGTCCTCCCAC
TTTCAATGCAGGGACTTCTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3227722..3229412 - |
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