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KJC3_008844-T1, KJC3_008844-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008844-T1
Unique NameKJC3_008844-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3230619..3231443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008844-T1 ID=KJC3_008844-T1|Name=KJC3_008844-T1|organism=Aspergillus niger KJC3|type=mRNA|length=825bp|location=Sequence derived from alignment at ch6:3230619..3231443+ (Aspergillus niger KJC3)
ATGTCGAACCCGTTGGACACCGACGCCGGCTCGGAGCTCTTCAGCAGCTA
CGAGACCGAGCTAAAGCTGGTGCAAGCCGATCTGAATCAGAAGTTGGACC
AGATCGCCGAGTCAAGCGGTGAACAACGAAAGTCAGCAATTAGGCAAGCC
GAGAGAGCCCTGGATGAAGCCACGGAATTGGTATGTTGGACGCATTTGGC
GAGAAGCGCGCCCCGCGTCAATTTTCCACTAACAGGCGGGAATACAGCTA
GATCAAATGCGCATGGAGAAGCAGAACATCCCCTCAGCAGCACGATCGAA
GATCAACACGCGCGTTCGCAACTACGCTACCGATATCGACGAGGCCAAAC
GCAAGTTGAGGTCTCTTTCCGATGACCGCAAGGCGCTCTTCGGCGACCGC
TACACAGATGATCCGCAGGACGAACATCTGGAACAAAGGCAACAGCTCCT
GTCTGGTACGGAGCGGTTGGAGCGGAGTTCCGCCCGGCTCCAGGAGAGTC
AGCGCATCGCCCTCGAGACGGAGGATATTGGTCGCAACACCTTGGCCGAC
TTGAACCAGCAGCGCGAGACGATCATGAATGCGCGGGGTCGGCTGCTCGA
GAGCGAAGGATATGTAGACACCAGTATCAAGACACTAAGGGGCATGGCCC
GTAGGTACTGTCCCCCTAACACTCAAGGACATTTGCTTCGCTACTTGTCA
CAGCTGCTTGACTGCTCAAATGCTTACTGTATTCTAGGATGGCTACGAAT
CGGTTGATCACAATTGCAATCATCACTGTCTTGATCCTGTTGATTTTTGC
CGTTATCTACAGCAAGTTCCATTGA
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Coding sequence (CDS) from alignment at ch6:3230619..3231443+

>KJC3_008844-T1 ID=KJC3_008844-T1|Name=KJC3_008844-T1|organism=Aspergillus niger KJC3|type=CDS|length=2025bp|location=Sequence derived from alignment at ch6:3230619..3231443+ (Aspergillus niger KJC3)
ATGTCGAACCCGTTGGACACCGACGCCGGCTCGGAGCTCTTCAGCAGCTA
CGAGACCGAGCTAAAGCTGGTGCAAGCCGATCTGAATCAGAAGTTGGACC
AGATCGCCGAGTCAAGCGGTGAACAACGAAAGTCAGCAATTAGGCAAGCC
GAGAGAGCCCTGGATGAAGCCACGGAATTGCTAGATCAAATGCGCATGGA
GAAGCAGAACATCCCCTCAGCAGCACGATCGAAGATCAACACGCGCGTTC
GCAACTACGCTACCGATATCGACGAGGCCAAACGCAAGTTGAGGTCTCTT
TCCGATGACCGCAAGGCGCTCTTCGGCGACCGCTACACAGATGATCCGCA
GGACGAACATCTGGAACAAAGGCAACAGCTCCTGTCTGGTACGGAGCGGT
TGGAGCGGAGTTCCGCCCGGCTCCAGGAGAGTCAGCGCATCGCCCTCGAG
ACGGAGGATATTGGTCGCAACACCTTGGCCGACTTGAACCAGCAGCGCGA
GACGATCATGAATGCGCGGGGTCGGCTGCTCGAGAGCGAAGGATATGTAG
ACACCAGTATCAAGACACTAAGGGGCATGGCCCGTAGGATGGCTACGAAT
CGGTTGATCACAATTGCAATCATCACTGTCTTGATCCTGTTGATTTTTGC
CGTTATCTACAGCAAGTTCCATTGAATGTCGAACCCGTTGGACACCGACG
CCGGCTCGGAGCTCTTCAGCAGCTACGAGACCGAGCTAAAGCTGGTGCAA
GCCGATCTGAATCAGAAGTTGGACCAGATCGCCGAGTCAAGCGGTGAACA
ACGAAAGTCAGCAATTAGGCAAGCCGAGAGAGCCCTGGATGAAGCCACGG
AATTGCTAGATCAAATGCGCATGGAGAAGCAGAACATCCCCTCAGCAGCA
CGATCGAAGATCAACACGCGCGTTCGCAACTACGCTACCGATATCGACGA
GGCCAAACGCAAGTTGAGGTCTCTTTCCGATGACCGCAAGGCGCTCTTCG
GCGACCGCTACACAGATGATCCGCAGGACGAACATCTGGAACAAAGGCAA
CAGCTCCTGTCTGGTACGGAGCGGTTGGAGCGGAGTTCCGCCCGGCTCCA
GGAGAGTCAGCGCATCGCCCTCGAGACGGAGGATATTGGTCGCAACACCT
TGGCCGACTTGAACCAGCAGCGCGAGACGATCATGAATGCGCGGGGTCGG
CTGCTCGAGAGCGAAGGATATGTAGACACCAGTATCAAGACACTAAGGGG
CATGGCCCGTAGGATGGCTACGAATCGGTTGATCACAATTGCAATCATCA
CTGTCTTGATCCTGTTGATTTTTGCCGTTATCTACAGCAAGTTCCATTGA
ATGTCGAACCCGTTGGACACCGACGCCGGCTCGGAGCTCTTCAGCAGCTA
CGAGACCGAGCTAAAGCTGGTGCAAGCCGATCTGAATCAGAAGTTGGACC
AGATCGCCGAGTCAAGCGGTGAACAACGAAAGTCAGCAATTAGGCAAGCC
GAGAGAGCCCTGGATGAAGCCACGGAATTGCTAGATCAAATGCGCATGGA
GAAGCAGAACATCCCCTCAGCAGCACGATCGAAGATCAACACGCGCGTTC
GCAACTACGCTACCGATATCGACGAGGCCAAACGCAAGTTGAGGTCTCTT
TCCGATGACCGCAAGGCGCTCTTCGGCGACCGCTACACAGATGATCCGCA
GGACGAACATCTGGAACAAAGGCAACAGCTCCTGTCTGGTACGGAGCGGT
TGGAGCGGAGTTCCGCCCGGCTCCAGGAGAGTCAGCGCATCGCCCTCGAG
ACGGAGGATATTGGTCGCAACACCTTGGCCGACTTGAACCAGCAGCGCGA
GACGATCATGAATGCGCGGGGTCGGCTGCTCGAGAGCGAAGGATATGTAG
ACACCAGTATCAAGACACTAAGGGGCATGGCCCGTAGGATGGCTACGAAT
CGGTTGATCACAATTGCAATCATCACTGTCTTGATCCTGTTGATTTTTGC
CGTTATCTACAGCAAGTTCCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008844KJC3_008844Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008844-T1.exon1KJC3_008844-T1.exon1Aspergillus niger KJC3exon
KJC3_008844-T1.exon2KJC3_008844-T1.exon2Aspergillus niger KJC3exon
KJC3_008844-T1.exon3KJC3_008844-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008844-T1.cdsKJC3_008844-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008844-T1KJC3_008844-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264R4M
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR007705
DBxrefInterPro:IPR038407
DBxrefInterPro:IPR000727
DBxrefPFAM:PF12352
DBxrefPFAM:PF05008
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3230619..3231443 +
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