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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3231705..3232786- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008845-T1 ID=KJC3_008845-T1|Name=KJC3_008845-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1082bp|location=Sequence derived from alignment at ch6:3231705..3232786- (Aspergillus niger KJC3)
CGTACCGACATCGCCGGCTTCATTCTGAACACACGACTACCTCATTTCCT
TATACCTTCCCACGCGACCAATAGACAATGGCATCATCCTCCTTTTTAAA
ATCCCCATCACCCCTTGACCTCCCACCCACGACCTCCACCTCCAACCCCC
TTTACGTGACCATCCGCTTCTCCGCCTCTATTCCCGACCTCCCCCTCGAC
ATCTTCTCCCCAGAAACCACCACCTCCGCCGGTCTAAAACAACTCATCCG
CACACGTCTCCCCCCTCATCTTTCCTCCCACCGTCTCCGTCTCATCCACG
CCGGCCGTGGCCTCGAAGACAAGACCCCCCTCTCCGTATCCCTCAAACTC
CCTCCCACACCCACGCGCTCCCCGCGACCATCCGCATCCCCACCCAGCGA
CACCACCTCAGATCCAGCCTCCGATCCCAACCGCAAAGGCAAGGCTCCCG
TCCGCGACCATCCCCGTCTCTACATTCACTGCTCCATCGGCGATATCGTT
CTCTCAGCGACCGATCTTGCCACGGAAGCGTCGATCGCATCTACGCTCGA
CGACGAACAACATTCATCATCAGAGTCTAATCACGATGATGGTAGCGCGA
GAGGACAACGACAGAAAGATGTACGGAATGATGACGACGCTAGTACTACA
ACGCCCGCGCCAAGAGGTTTCGACCGGTTACTCTCAGCGGGATTTACACC
CGCGGAGGTGGCAGGCCTTCGGTCGCAATTTCTAGCGGTACAGTCGGTAT
CGCGTACTCCGGATACCATGCCGTCGGGAGCGGAGTTGCGGGAGCTGGAG
GACCGGTGGATGGATGAGGGGTCGACGGCGGCTATGGCGGCTGGGGGAGG
GGGCGGGGATGGGGCGGTCTCGTTTGCGGATGATGATGGGGGTTTTGGGG
CTGGGTCGAGGGGCGCGATGGATGATATGCTTTGGGGGGCGGTGATGGGG
TTCTTTTGGCCGGTTGGGTGTGCTATGTGGTTGAGGAGGGAAGAGGGGGT
GTGGAGTTGGAGGAAGGGGTTGGCGGTTTTTGTTGGGGTCGTGGTCAATA
TTGCCTTTGGGGCGATGAGGATTATGAATTAG back to topCoding sequence (CDS) from alignment at ch6:3231705..3232786- >KJC3_008845-T1 ID=KJC3_008845-T1|Name=KJC3_008845-T1|organism=Aspergillus niger KJC3|type=CDS|length=1005bp|location=Sequence derived from alignment at ch6:3231705..3232786- (Aspergillus niger KJC3)
ATGGCATCATCCTCCTTTTTAAAATCCCCATCACCCCTTGACCTCCCACC
CACGACCTCCACCTCCAACCCCCTTTACGTGACCATCCGCTTCTCCGCCT
CTATTCCCGACCTCCCCCTCGACATCTTCTCCCCAGAAACCACCACCTCC
GCCGGTCTAAAACAACTCATCCGCACACGTCTCCCCCCTCATCTTTCCTC
CCACCGTCTCCGTCTCATCCACGCCGGCCGTGGCCTCGAAGACAAGACCC
CCCTCTCCGTATCCCTCAAACTCCCTCCCACACCCACGCGCTCCCCGCGA
CCATCCGCATCCCCACCCAGCGACACCACCTCAGATCCAGCCTCCGATCC
CAACCGCAAAGGCAAGGCTCCCGTCCGCGACCATCCCCGTCTCTACATTC
ACTGCTCCATCGGCGATATCGTTCTCTCAGCGACCGATCTTGCCACGGAA
GCGTCGATCGCATCTACGCTCGACGACGAACAACATTCATCATCAGAGTC
TAATCACGATGATGGTAGCGCGAGAGGACAACGACAGAAAGATGTACGGA
ATGATGACGACGCTAGTACTACAACGCCCGCGCCAAGAGGTTTCGACCGG
TTACTCTCAGCGGGATTTACACCCGCGGAGGTGGCAGGCCTTCGGTCGCA
ATTTCTAGCGGTACAGTCGGTATCGCGTACTCCGGATACCATGCCGTCGG
GAGCGGAGTTGCGGGAGCTGGAGGACCGGTGGATGGATGAGGGGTCGACG
GCGGCTATGGCGGCTGGGGGAGGGGGCGGGGATGGGGCGGTCTCGTTTGC
GGATGATGATGGGGGTTTTGGGGCTGGGTCGAGGGGCGCGATGGATGATA
TGCTTTGGGGGGCGGTGATGGGGTTCTTTTGGCCGGTTGGGTGTGCTATG
TGGTTGAGGAGGGAAGAGGGGGTGTGGAGTTGGAGGAAGGGGTTGGCGGT
TTTTGTTGGGGTCGTGGTCAATATTGCCTTTGGGGCGATGAGGATTATGA
ATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008845-T1.utr5p1 | KJC3_008845-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092640WA |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR025390 |
| DBxref | InterPro:IPR019413 |
| DBxref | PFAM:PF13373 |
| DBxref | PFAM:PF10302 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3231705..3232786 - |
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