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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3246123..3247520+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008851-T1 ID=KJC3_008851-T1|Name=KJC3_008851-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1398bp|location=Sequence derived from alignment at ch6:3246123..3247520+ (Aspergillus niger KJC3)
TCTCATCCTCCTGTTTCTCTCTTCTATCAACACCAGCAACTCATCATCAA
TTTATCTCGCTTACACCCCGGCTACGGTCGTTTACTTCAGTAAGCTGAGG
GCTGTTATTTCATCATTATTTAAATCCAGCCACCTTGGTGTTCTGGTAAC
TTGATCGGCGCAAAAGACGCGATACACTCCGATTGAGAGTAACACAGCAG
CGAAAAGGCAATATCGCCTCAAAAGGTGTACTGAAGAAAGCCTTCGAAGG
GCAATTCAGCTACATTGGGTGTTAGCCTTATTTTGCTCGTTTGTTGACTT
CGCCACTCTACTATTCAATCACTATGGCGCCTACGGAATCTTCAATTCTG
GGCAATTTTCTGCTCTCACCGGCTCCTTTGCCGACAATCATGTCGTTACA
GCAGTTTACGGAGCTCTTTCCAAAGCGTTTGCGGTCTCACCCGCATATTA
GAGCGCTCTATCGCGAACTGCAAGAGCTCCGGGAAAATGACATGGACCTT
GTTAACGGTAACATTGACAAGGAGGTTCGCCAAGGGGAGACCCAAAAGGC
AGAGCTCCGGAAGTCCGTCGCCAAGACAGGTGTTGACGGACTCAGCTCTA
GCGATCAGCGTGAGATGGATATGGATGTCCAGTTGTTCGGACAAACATCG
TCTTCCGACTATCATTCACCTTCCAGTCTCCTGGATGCCATGGAGCAGGC
CATATCAGACATTGACCGCCAGGTTTCTGAGACTGATGAGGAAGCAACAG
CGATATTGGCTATGCTCAACAACACGGTCGGAGAAATGAGCGACTTGCGC
TACGGCAAAATGCAGGGCCCCGCCGGCACAAGCGGCGAAGACATGGTGAA
TGAAGCCATCCGAGGCTTGGGTCATCTGGAAAATGCGTGCTACCGTAAAA
GCTGAGCTCTATATGGCAGACGCATTACGTTTATCGAGGTTTATTTTCTC
ACCCCTCCACCTGCCTACTTGTCAGGCACGAATAACATAACCTGCCTGCC
TGCTCGAGTTGCATTGGCCAGATGCCGCAAACCAACACTACAGCGCGGGT
CTATACATTGTGTGAGACCAATGTACTCTCAGCAGGGCCTCGGCATCCTT
GCGGACTAGACTCCCTAGAGTATTGGCAACCATTGACCGTTCATTTGGAG
CCTGACCAACCGAAACCACATGTTTGTGGGGGTGAAGATCTGGACAGGAC
AACACTTAGCTTCAAAGGGCAGAACAAGCCAACCCAGTATGGCTTCCCTC
ATTGCATTATTTGAACAGGACGAAAGTTCTATTGGTGATTATGAAAGACT
GGTATTACGCTGCTGCCCATTGACTTGGATGAAAATCGAAGACTCTGATG
CAGGACGATACCCTATTCAGATATCAAATTGACGATCTGTCACTTCTG back to topCoding sequence (CDS) from alignment at ch6:3246123..3247520+ >KJC3_008851-T1 ID=KJC3_008851-T1|Name=KJC3_008851-T1|organism=Aspergillus niger KJC3|type=CDS|length=582bp|location=Sequence derived from alignment at ch6:3246123..3247520+ (Aspergillus niger KJC3)
ATGGCGCCTACGGAATCTTCAATTCTGGGCAATTTTCTGCTCTCACCGGC
TCCTTTGCCGACAATCATGTCGTTACAGCAGTTTACGGAGCTCTTTCCAA
AGCGTTTGCGGTCTCACCCGCATATTAGAGCGCTCTATCGCGAACTGCAA
GAGCTCCGGGAAAATGACATGGACCTTGTTAACGGTAACATTGACAAGGA
GGTTCGCCAAGGGGAGACCCAAAAGGCAGAGCTCCGGAAGTCCGTCGCCA
AGACAGGTGTTGACGGACTCAGCTCTAGCGATCAGCGTGAGATGGATATG
GATGTCCAGTTGTTCGGACAAACATCGTCTTCCGACTATCATTCACCTTC
CAGTCTCCTGGATGCCATGGAGCAGGCCATATCAGACATTGACCGCCAGG
TTTCTGAGACTGATGAGGAAGCAACAGCGATATTGGCTATGCTCAACAAC
ACGGTCGGAGAAATGAGCGACTTGCGCTACGGCAAAATGCAGGGCCCCGC
CGGCACAAGCGGCGAAGACATGGTGAATGAAGCCATCCGAGGCTTGGGTC
ATCTGGAAAATGCGTGCTACCGTAAAAGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000776 | kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008851-T1.utr5p1 | KJC3_008851-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008851-T1.utr3p1 | KJC3_008851-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018565 |
| DBxref | PFAM:PF09447 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3246123..3247520 + |
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