|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3254339..3256362- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008855-T1 ID=KJC3_008855-T1|Name=KJC3_008855-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2024bp|location=Sequence derived from alignment at ch6:3254339..3256362- (Aspergillus niger KJC3)
CAGATAACATGGGAATGTGTGATGGACAACCTCGAGAAGACTTGGAGAAG
TATACAGGGCACGTGACTGGCTCTGGATCGGGAAGGTGGCAGCGGCTTCC
CCATTCAGGCAACCGCATCGACTCCTTCAAGTATTCTTATCGATAAAGTG
CGGCCTCCTCTCCTGACTTTGCCAGTTCCGCTCACTGTACATTGTCCACT
GTCCTCCTCGTTACGCGCGCAATCTTAGAGAAGAAGCATTTTTCGGCATG
GCAGCCGTAATGACACCTTTCCCTTAGGCACCACACACACCCTTCGCTAA
CCGCCGGGCAGCATGGGATTCCCCGCTACTCGCTCCAAGGCGAGCAGACC
GAAGAAGGTCGGCAGAAAGAACTTCAGAAAATCGAGAAATATCGCCAGCT
TGATCAATCGGTCCGCGAGAAGGTAGACCACATGCAAGAAACAAGCTATC
GCCAGCGCTAGCTGATGGTGATTAACTAGATCGCGGAACAACAATATACG
CCAGAGACTCTAGAGAAAATAGCCGAACTACTGACCAGCAACCCGGAGTA
CTATACCGTTTGGAATTATCGGCGCCAGGTGTTGCGCAATGAATTCTCAC
GAGCAGCTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGCAGATTGCGACA
CTAATCAAGAATGACCTACTATTCACGGTTCCCCTCCTGCGTAGCTTTCC
CAAATGCTACTGGATATGGAACTACCGTACTTGGCTGTTGGATGAAGCCA
AGCGTCTGCTTCCAGTACCTGCTGCGCAAAAATTCTGGCAGGAAGAACTG
GGACTGGTAGGGAAGATGCTTACCCTAGACAGCAGAAACTTCCACGGCTG
GGGTTACAGACGCTTTGTCGTAGAGACGCTGCGAGAGCTCAAATCGGAGG
AGCAGGAAGGGCAACAGATGACGCAGACAGAGTACGAATATGCAAAGAAG
ATGATTGGCGCTAACCTCTCCAACTTCTCGGCCTGGCATTATCGCACGAA
ACTCATTCAGCGCATGTTGAACGAGAAATCCGCTAGCGACGTGGAGCGAA
AAGCGATGCTTGACAATGGTACGTCATCCCCTTTGTCATCTGCGTGGCCT
GGAGACAGCGTACGAGTATGTGTGTTGACATATCATACTGGAAGAATTGG
ACTTGATCCATCGTGCCCTGTGTGACCCGTATGACCAGTCATTATGGTTC
TATCATCAAAACCTAATGTGCGTCTTTGATCCATCCGTGGCGGACCAGAC
GCTGGCACCGCACTTGAGTGATGCCGAACGCCTCGATTACCTGCGACAGG
AAATCGACGAGATTCAAGAGATGTTGGATGGAGCTGAGGATTGCAAGTAT
ATTTACCAAGCATTGATCGATTGTACGATGTTGGCCTGGAAGGTGGAGGG
AAATGCGCCCAGTGGAGAGACGAAAAAGAAGGTCCAGCATTGGCTGTCGG
AATTGAAGAAGCTGGACCCGCTGCGACTCCAACGGTGGCTGGATTTGGAA
CACTCCCTCAGCCGCTGAGCCAGTCACCACCCCTTACCGATGCGATATGT
ATAGTAATCTATAGACGCCATCTGCGGGGGGAATAATTTTTTGCTTTGTT
TAATGGAAGATTTTCCGATCTTCAACTTACTTTTCCTTGCTTTTTTCTCC
CCCCTCTTGTGCGATGATCGGTGGTGGACATGGGACGGACAGGAAGATGA
TGGGCAGCAGCTGCAGCACTTGCTCCATAGTGGGACCAACCACCGCGATG
GATTTTTGTTGGTGAGTTTCAGAATAACAAGTGTCCACGGGAATGCTGGC
CTCCGCGGGCGGGAGAATCGCAATAATGCAGCCCCGGAGGCATTTAGTGG
TTCACCTGGCAGGAACCCGCGCATCGCCTGTCGATAAATCCCGACCACAG
AATTATTGTGAGTACAGACGTAGTGTAGAAGTAACCTGTCGAACCGCCGG
CCAGCCCGCCTTTACTCTCTCCTAACCGAGCATGGCTGTGGAGATGTTTT
CTTTGCATAAGGAACAGCCTCTCC back to topCoding sequence (CDS) from alignment at ch6:3254339..3256362- >KJC3_008855-T1 ID=KJC3_008855-T1|Name=KJC3_008855-T1|organism=Aspergillus niger KJC3|type=CDS|length=4332bp|location=Sequence derived from alignment at ch6:3254339..3256362- (Aspergillus niger KJC3)
AATTGGACTTGATCCATCGTGCCCTGTGTGACCCGTATGACCAGTCATTA
TGGTTCTATCATCAAAACCTAATGTGCGTCTTTGATCCATCCGTGGCGGA
CCAGACGCTGGCACCGCACTTGAGTGATGCCGAACGCCTCGATTACCTGC
GACAGGAAATCGACGAGATTCAAGAGATGTTGGATGGAGCTGAGGATTGC
AAGTATATTTACCAAGCATTGATCGATTGTACGATGTTGGCCTGGAAGGT
GGAGGGAAATGCGCCCAGTGGAGAGACGAAAAAGAAGGTCCAGCATTGGC
TGTCGGAATTGAAGAAGCTGGACCCGCTGCGACTCCAACGGTGGCTGGAT
TTGGAACACTCCCTCAGCCGCTGAATCGCGGAACAACAATATACGCCAGA
GACTCTAGAGAAAATAGCCGAACTACTGACCAGCAACCCGGAGTACTATA
CCGTTTGGAATTATCGGCGCCAGGTGTTGCGCAATGAATTCTCACGAGCA
GCTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGCAGATTGCGACACTAAT
CAAGAATGACCTACTATTCACGGTTCCCCTCCTGCGTAGCTTTCCCAAAT
GCTACTGGATATGGAACTACCGTACTTGGCTGTTGGATGAAGCCAAGCGT
CTGCTTCCAGTACCTGCTGCGCAAAAATTCTGGCAGGAAGAACTGGGACT
GGTAGGGAAGATGCTTACCCTAGACAGCAGAAACTTCCACGGCTGGGGTT
ACAGACGCTTTGTCGTAGAGACGCTGCGAGAGCTCAAATCGGAGGAGCAG
GAAGGGCAACAGATGACGCAGACAGAGTACGAATATGCAAAGAAGATGAT
TGGCGCTAACCTCTCCAACTTCTCGGCCTGGCATTATCGCACGAAACTCA
TTCAGCGCATGTTGAACGAGAAATCCGCTAGCGACGTGGAGCGAAAAGCG
ATGCTTGACAATGCATGGGATTCCCCGCTACTCGCTCCAAGGCGAGCAGA
CCGAAGAAGGTCGGCAGAAAGAACTTCAGAAAATCGAGAAATATCGCCAG
CTTGATCAATCGGTCCGCGAGAAGATGGCAGCCAATTGGACTTGATCCAT
CGTGCCCTGTGTGACCCGTATGACCAGTCATTATGGTTCTATCATCAAAA
CCTAATGTGCGTCTTTGATCCATCCGTGGCGGACCAGACGCTGGCACCGC
ACTTGAGTGATGCCGAACGCCTCGATTACCTGCGACAGGAAATCGACGAG
ATTCAAGAGATGTTGGATGGAGCTGAGGATTGCAAGTATATTTACCAAGC
ATTGATCGATTGTACGATGTTGGCCTGGAAGGTGGAGGGAAATGCGCCCA
GTGGAGAGACGAAAAAGAAGGTCCAGCATTGGCTGTCGGAATTGAAGAAG
CTGGACCCGCTGCGACTCCAACGGTGGCTGGATTTGGAACACTCCCTCAG
CCGCTGAATCGCGGAACAACAATATACGCCAGAGACTCTAGAGAAAATAG
CCGAACTACTGACCAGCAACCCGGAGTACTATACCGTTTGGAATTATCGG
CGCCAGGTGTTGCGCAATGAATTCTCACGAGCAGCTTCAGCTGGCTCAAA
CGAAGCAGCTGCTGAGCAGATTGCGACACTAATCAAGAATGACCTACTAT
TCACGGTTCCCCTCCTGCGTAGCTTTCCCAAATGCTACTGGATATGGAAC
TACCGTACTTGGCTGTTGGATGAAGCCAAGCGTCTGCTTCCAGTACCTGC
TGCGCAAAAATTCTGGCAGGAAGAACTGGGACTGGTAGGGAAGATGCTTA
CCCTAGACAGCAGAAACTTCCACGGCTGGGGTTACAGACGCTTTGTCGTA
GAGACGCTGCGAGAGCTCAAATCGGAGGAGCAGGAAGGGCAACAGATGAC
GCAGACAGAGTACGAATATGCAAAGAAGATGATTGGCGCTAACCTCTCCA
ACTTCTCGGCCTGGCATTATCGCACGAAACTCATTCAGCGCATGTTGAAC
GAGAAATCCGCTAGCGACGTGGAGCGAAAAGCGATGCTTGACAATGCATG
GGATTCCCCGCTACTCGCTCCAAGGCGAGCAGACCGAAGAAGGTCGGCAG
AAAGAACTTCAGAAAATCGAGAAATATCGCCAGCTTGATCAATCGGTCCG
CGAGAAGATGGCAGCCAATTGGACTTGATCCATCGTGCCCTGTGTGACCC
GTATGACCAGTCATTATGGTTCTATCATCAAAACCTAATGTGCGTCTTTG
ATCCATCCGTGGCGGACCAGACGCTGGCACCGCACTTGAGTGATGCCGAA
CGCCTCGATTACCTGCGACAGGAAATCGACGAGATTCAAGAGATGTTGGA
TGGAGCTGAGGATTGCAAGTATATTTACCAAGCATTGATCGATTGTACGA
TGTTGGCCTGGAAGGTGGAGGGAAATGCGCCCAGTGGAGAGACGAAAAAG
AAGGTCCAGCATTGGCTGTCGGAATTGAAGAAGCTGGACCCGCTGCGACT
CCAACGGTGGCTGGATTTGGAACACTCCCTCAGCCGCTGAATCGCGGAAC
AACAATATACGCCAGAGACTCTAGAGAAAATAGCCGAACTACTGACCAGC
AACCCGGAGTACTATACCGTTTGGAATTATCGGCGCCAGGTGTTGCGCAA
TGAATTCTCACGAGCAGCTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGC
AGATTGCGACACTAATCAAGAATGACCTACTATTCACGGTTCCCCTCCTG
CGTAGCTTTCCCAAATGCTACTGGATATGGAACTACCGTACTTGGCTGTT
GGATGAAGCCAAGCGTCTGCTTCCAGTACCTGCTGCGCAAAAATTCTGGC
AGGAAGAACTGGGACTGGTAGGGAAGATGCTTACCCTAGACAGCAGAAAC
TTCCACGGCTGGGGTTACAGACGCTTTGTCGTAGAGACGCTGCGAGAGCT
CAAATCGGAGGAGCAGGAAGGGCAACAGATGACGCAGACAGAGTACGAAT
ATGCAAAGAAGATGATTGGCGCTAACCTCTCCAACTTCTCGGCCTGGCAT
TATCGCACGAAACTCATTCAGCGCATGTTGAACGAGAAATCCGCTAGCGA
CGTGGAGCGAAAAGCGATGCTTGACAATGCATGGGATTCCCCGCTACTCG
CTCCAAGGCGAGCAGACCGAAGAAGGTCGGCAGAAAGAACTTCAGAAAAT
CGAGAAATATCGCCAGCTTGATCAATCGGTCCGCGAGAAGATGGCAGCCA
ATTGGACTTGATCCATCGTGCCCTGTGTGACCCGTATGACCAGTCATTAT
GGTTCTATCATCAAAACCTAATGTGCGTCTTTGATCCATCCGTGGCGGAC
CAGACGCTGGCACCGCACTTGAGTGATGCCGAACGCCTCGATTACCTGCG
ACAGGAAATCGACGAGATTCAAGAGATGTTGGATGGAGCTGAGGATTGCA
AGTATATTTACCAAGCATTGATCGATTGTACGATGTTGGCCTGGAAGGTG
GAGGGAAATGCGCCCAGTGGAGAGACGAAAAAGAAGGTCCAGCATTGGCT
GTCGGAATTGAAGAAGCTGGACCCGCTGCGACTCCAACGGTGGCTGGATT
TGGAACACTCCCTCAGCCGCTGAATCGCGGAACAACAATATACGCCAGAG
ACTCTAGAGAAAATAGCCGAACTACTGACCAGCAACCCGGAGTACTATAC
CGTTTGGAATTATCGGCGCCAGGTGTTGCGCAATGAATTCTCACGAGCAG
CTTCAGCTGGCTCAAACGAAGCAGCTGCTGAGCAGATTGCGACACTAATC
AAGAATGACCTACTATTCACGGTTCCCCTCCTGCGTAGCTTTCCCAAATG
CTACTGGATATGGAACTACCGTACTTGGCTGTTGGATGAAGCCAAGCGTC
TGCTTCCAGTACCTGCTGCGCAAAAATTCTGGCAGGAAGAACTGGGACTG
GTAGGGAAGATGCTTACCCTAGACAGCAGAAACTTCCACGGCTGGGGTTA
CAGACGCTTTGTCGTAGAGACGCTGCGAGAGCTCAAATCGGAGGAGCAGG
AAGGGCAACAGATGACGCAGACAGAGTACGAATATGCAAAGAAGATGATT
GGCGCTAACCTCTCCAACTTCTCGGCCTGGCATTATCGCACGAAACTCAT
TCAGCGCATGTTGAACGAGAAATCCGCTAGCGACGTGGAGCGAAAAGCGA
TGCTTGACAATGCATGGGATTCCCCGCTACTCGCTCCAAGGCGAGCAGAC
CGAAGAAGGTCGGCAGAAAGAACTTCAGAAAATCGAGAAATATCGCCAGC
TTGATCAATCGGTCCGCGAGAAGATGGCAGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008318 | protein prenyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0018342 | protein prenylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008855-T1.utr3p1 | KJC3_008855-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008855-T1.utr5p1 | KJC3_008855-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002088 |
| DBxref | PFAM:PF01239 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3254339..3256362 - |
|
