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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3308192..3309256- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008874-T1 ID=KJC3_008874-T1|Name=KJC3_008874-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1065bp|location=Sequence derived from alignment at ch6:3308192..3309256- (Aspergillus niger KJC3)
ATGGCTTGCTTCTCGTTCGGCGAGGCCATTTACATTGTCGCTGGGAAGAA
TGGGGCTATTGTCCACTCCAAAGGTATTCCGATCCCAAGAAGTGCAGGGG
TCTAACGTGGCTTACTCCTTCAGCGATGACTGAGAGAATTGAGCCTCCCC
CAAACTCAACCATGACGATTCGGCGATCCTCCCCCACACCGGGTGACTTC
CCCATCTGTAGGGACCCTCGCGGCGCTGCCCGACCATTCTGTCTCCCAGA
GGATGGTGCAAACGTGACGGTGGGTGGGACTTACTACATCACATGGGACG
CGGACTTTTATCCTCTGAATGCCACAATAACCATCGAACTGAGATATGCG
GACTCTGTGGAAGGGGATTCGACATTTACCTCGGACAGGACGGACAACAG
CTACGGATATACTCACATCCATATGCAGCAAGAATGGCTTCAAGGAAAGC
AGCAGAATCCTCTGACACTTTACATCATCGAGCTAGACTCGGTGTCAGAT
AAGCGGGCAAGTGCCCGACGGGGACCAACAGTCGTTCTTCATCCCAAGCC
AGTGCAGCATCTTTTGTCTCCTCCGCCCACTTCATTTAACAAGTTGGCTC
TTTATATTGGCCTCCCCGTGAGTCTCAGCGTGGTCATACTCGTTGTTGCT
GGACTCTACTTTGGCATGCGAGAGAGCAGGCGAATTGATCTGGGAAACAT
CGGGGGCCCGGGGTATGGCATTAGAAAGTCCAAGGTTCAGCGCCTAGGGC
GCAACCGAGGCGAGTCAGCGGAGGAGAGAAATGTGGAGGAGACGAACTCG
GACATCACCGAAGTCGCCCAGCCCGGTCGAAAGGGAGCTTTGGAACGAGG
CCTCAGCTTTGGGTGCAAGCATGATTCGTCGAGAACGAAGAGCTGGCAGG
TGTAAATTCCAGAGCATGGGAGCAGTGCGGCAAGACTAAAGCATGCAGGA
TTTGGTGCGCGCTTGGCCCAGTTGGAGGCAGGGGTTTAAGTATTGTATAA
ACGAGCCAGGTTCAGTGGTATAACTGTTATCGGACTAGTGGTTGCAAAGA
AGACTAAAATCTCAC back to topCoding sequence (CDS) from alignment at ch6:3308192..3309256- >KJC3_008874-T1 ID=KJC3_008874-T1|Name=KJC3_008874-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch6:3308192..3309256- (Aspergillus niger KJC3)
CGATGACTGAGAGAATTGAGCCTCCCCCAAACTCAACCATGACGATTCGG
CGATCCTCCCCCACACCGGGTGACTTCCCCATCTGTAGGGACCCTCGCGG
CGCTGCCCGACCATTCTGTCTCCCAGAGGATGGTGCAAACGTGACGGTGG
GTGGGACTTACTACATCACATGGGACGCGGACTTTTATCCTCTGAATGCC
ACAATAACCATCGAACTGAGATATGCGGACTCTGTGGAAGGGGATTCGAC
ATTTACCTCGGACAGGACGGACAACAGCTACGGATATACTCACATCCATA
TGCAGCAAGAATGGCTTCAAGGAAAGCAGCAGAATCCTCTGACACTTTAC
ATCATCGAGCTAGACTCGGTGTCAGATAAGCGGGCAAGTGCCCGACGGGG
ACCAACAGTCGTTCTTCATCCCAAGCCAGTGCAGCATCTTTTGTCTCCTC
CGCCCACTTCATTTAACAAGTTGGCTCTTTATATTGGCCTCCCCGTGAGT
CTCAGCGTGGTCATACTCGTTGTTGCTGGACTCTACTTTGGCATGCGAGA
GAGCAGGCGAATTGATCTGGGAAACATCGGGGGCCCGGGGTATGGCATTA
GAAAGTCCAAGGTTCAGCGCCTAGGGCGCAACCGAGGCGAGTCAGCGGAG
GAGAGAAATGTGGAGGAGACGAACTCGGACATCACCGAAGTCGCCCAGCC
CGGTCGAAAGGGAGCTTTGGAACGAGGCCTCAGCTTTGGGTGCAAGCATG
ATTCGTCGAGAACGAAGAGCTGGCAGGTGTAAATGGCTTGCTTCTCGTTC
GGCGAGGCCATTTACATTGTCGCTGGGAAGAATGGGGCTATTGTCCACTC
CAAAGCGATGACTGAGAGAATTGAGCCTCCCCCAAACTCAACCATGACGA
TTCGGCGATCCTCCCCCACACCGGGTGACTTCCCCATCTGTAGGGACCCT
CGCGGCGCTGCCCGACCATTCTGTCTCCCAGAGGATGGTGCAAACGTGAC
GGTGGGTGGGACTTACTACATCACATGGGACGCGGACTTTTATCCTCTGA
ATGCCACAATAACCATCGAACTGAGATATGCGGACTCTGTGGAAGGGGAT
TCGACATTTACCTCGGACAGGACGGACAACAGCTACGGATATACTCACAT
CCATATGCAGCAAGAATGGCTTCAAGGAAAGCAGCAGAATCCTCTGACAC
TTTACATCATCGAGCTAGACTCGGTGTCAGATAAGCGGGCAAGTGCCCGA
CGGGGACCAACAGTCGTTCTTCATCCCAAGCCAGTGCAGCATCTTTTGTC
TCCTCCGCCCACTTCATTTAACAAGTTGGCTCTTTATATTGGCCTCCCCG
TGAGTCTCAGCGTGGTCATACTCGTTGTTGCTGGACTCTACTTTGGCATG
CGAGAGAGCAGGCGAATTGATCTGGGAAACATCGGGGGCCCGGGGTATGG
CATTAGAAAGTCCAAGGTTCAGCGCCTAGGGCGCAACCGAGGCGAGTCAG
CGGAGGAGAGAAATGTGGAGGAGACGAACTCGGACATCACCGAAGTCGCC
CAGCCCGGTCGAAAGGGAGCTTTGGAACGAGGCCTCAGCTTTGGGTGCAA
GCATGATTCGTCGAGAACGAAGAGCTGGCAGGTGTAAATGGCTTGCTTCT
CGTTCGGCGAGGCCATTTACATTGTCGCTGGGAAGAATGGGGCTATTGTC
CACTCCAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008874-T1.utr3p1 | KJC3_008874-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.18 |
| DBxref | InterPro:IPR028000 |
| DBxref | PFAM:PF14610 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3308192..3309256 - |
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