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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3325613..3328626+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008879-T1 ID=KJC3_008879-T1|Name=KJC3_008879-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3014bp|location=Sequence derived from alignment at ch6:3325613..3328626+ (Aspergillus niger KJC3)
CAACTCACGCCTCTGGTCTTGTCCCGACTGGCACTCTCCGCTCCAAGGCC
GCCTTACACTCGCATCCCCCCGTTCCTTTGGCATCATCTCATCTCATCCT
TCCCCTTCCCCTTCCCTCTCTTTCTCTTCCCCTCACCCTCCCCTCTTCCT
TCTTCCCTCTCCGTCTCTCTTTCTTTCTCTCCCTCCCACGCATCCATTCA
CACCCACTCTCTCTCTTCACTCTCCGACAACCTTCAAGACCACCCTTCTT
GCCATGGGTCTTGTTGGCTTTCACTCTTCGTTTGCTTCCTCTTATGCAGA
CTTCCTCTCCCTCACTTTCCTGAGTGCCGTTGCTTGATCTTATGGCGTAT
TGTCTTGACACGCCTTTCCGTGCATTCGGCCGCTGACCTGCAGCTTCTAA
GCTGCCAACCGTCTGTATTCCGGATCTCGAATCATTCCCTCCTCTCAATT
CCTCTCCTCCGATCGACTCAGACGTATCTCGCCCTCTTCCTCCCTCCCTT
CGCCTCGACCTCTTCGATTATCTCTACATTATCCTTTCTGCAACCTACCT
CATGCCGGCTCTCGAGGTCCCCGAGTCCGGGTTGTCTCTCTGCCGAGACA
ACCACGGCAATGATGCTACCACCAAGCCTGTTCAGATTATGCGGCTGAAT
TTAGCTCAGAGCACTCTTGATGAGCTGATCCAGAGCCTCCGGAACGATCA
AACAGCCCGAGTCCGCCTGGGAAAACATGCGACTCTCTACTACGGCTCCA
AATCCCAACAATTTCATCCCCTCCCCGAGACGTGTCGATCAGAGCTATAT
AGCAGTAGCTCCGCGGACAAGGAAAACCTATATTTCAGCGGTGTTTTGAG
CCATAGCTTGGAGGTCCAGAAGGCGAAGGAAGATACCGCGAGTGCTGACC
AGGCATTGGCCAATCTGGAGCAAAGTCTAAATGCCTTCGAAAGAGGGAAA
GAGTCGAAGAAGACCGCTATAATCACGAGCATTGATGAAGTGAGAGCTCT
GCGAGCAGGCGACAGCCGATACGGTACTGGAAAACAGACTGCTCGTTTGG
GTCGTGCTCCGGCAAGCAAGGTGGAGCTGGAAAAGGATCGACTGCTTACT
GCCAATCGCTCCGTTTCCTCGAGCCCGGCTCTGGGAGTTGTTCGATCACC
TGCATCCATACCTCCGCTTACGCCTACCTCCGCTCCGCTTTCTCAAAACA
AAGATCGCATTCGCCTTGAGGCTCTAAAGGTCCCCTTCATTCACCTCCTC
GCCGTCCGGACAGTTTCCGCCAAATTCCTCGCGCGACAAACTCGCGCGTC
CCTCGAAGACTGCGAGACTCTGGCCCGGAAATACGGCACCGAAAACCGAA
TCAATCCGGAGAAGTTCGATCTTAAAGATAAAACCTATCGAGAGCTTGAT
GTGTGGAAATTTCCCTATCCCTCCCAGGAAGATCGACAGGAGGCAATTGA
GAATGCCATCTCTGCATTTGATCGCCTGCGAATCTCCCGGTCCGACAAGC
TCTGGCAGATGCTTCTTCCCAAGGAAGAACGCGGAAAGGGCAAGTGCTTA
TCACGCCTGGACTTGCGGACGGGTCCCATCAAGAAAGCTGCCACGCCTCG
GATACAGGTACAGACATCTGATGACAATAGCAAGGATGGTTACACTACGG
GTCAGGAGACCGACAAGGCTAGTGGGAATGGTCTAACACCAAGGACGGGT
GAGCCGACGTCAGCTCCCAGATCTGGGACGGTCGCGCAGAAGAAACGGCC
CGGCGACAAGGATGCCGGTGCGAAACGGACCGCCGCAAAGAGCAAGGTTG
CGGGTAACAGTACCTTGACGGGACGCGTCACCAAGAAGGCGGAGCGGAAG
ACGACCGCGAAACAGCCGGAGGGCAAGTTCAAGTCGGCGGAATTCGTTCA
TGACTCGGATGAGGACGACACCGATCTGCCAGATGCATCGTCAACCGAGA
AGCCACAGCCTGCAAAGGCAAAGGCTGAACCAAAACCGCAGACCAAACTG
CAGAAGCCCAGCCCTCCCAGGGAATCCTCTCATGCGCCTACCCCGAAGGT
GGAGCAGCCAGAAGCTACACCTAAATCGGAGCCGATCGACCAAGCGTCTC
ATCGGCCTATGGCAGCAAAGAGGCCTCCTTCCTCGCGACCTCCCGCGCAG
AAGTCCCCTCAGAAATCCCCTCAGAAACCGTCGCCCCTCGGGTCTTCCCC
CCCAACCAACGCCTCTGATATCCAAAATCGCAGTCGTTCTTCAAGTCAAA
ACAATTCTTCAAGTTCCTCGTCATCATCGCCCCTCATAACCCAGGTCAAC
AAGCCCAGACCTGTTGCGAGCGCGCCCACCGTGAGGAAAGTGGTCAAGAC
CAATGGTGTATCTAAACCGGCTGGAGTTGCCAATCCCTTGAAGCGCAAGG
CGGAGCTTGAGCGGCCTGCAGCGTTAGCTCAAGTCCCCGGGCGTATTGCG
GGGGATCTGGAACACAAACGGCGGCGAGCCGTGAGCACGTCCAGTGGCAG
CACTGGGAGCGCCTCGCCCCCTCTCCGCCGCGAAGTTACCATCCAGGAGT
TGCACGACAAGTCGAAGAAGTTCAAGCGGTTCTACGCCAAATACCACGCC
TTACATGACGCATTGGCCTCTCAGCAGAATCCGTCGCGAGCCGACTTGGA
GAAGCTCCAGAGGCAGCACATTAGTCTGCGGCGGATGAAGGAAGAGATAT
GGGCCGAACATCAACAGCTCCGGGGTGGGCTCTAACGACAGAACATGGCA
TTTGCATGATTTTTATTTATTTCATTTATTTTTCTTTTTTTTTTTTTTTA
TCTATTTCTCGACCCTTGTTTATTATGGTGTCTGGTCCCGGACATTGACA
GAACGGGGTTCCTGTTATTATTCCACGATGTTGTTCTTCTCGACTACCAT
TGTGTCTGTTTTGTTTAGCATGACGAAGCCGGATAACAGAAAAAGTGCTT
CGAGGCGTTTCATGGGACCAGGTGGATGCTGTTGATGCTTGGATTTTTTT
TTTTTTTCTTTTTT back to topCoding sequence (CDS) from alignment at ch6:3325613..3328626+ >KJC3_008879-T1 ID=KJC3_008879-T1|Name=KJC3_008879-T1|organism=Aspergillus niger KJC3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch6:3325613..3328626+ (Aspergillus niger KJC3)
ATGCCGGCTCTCGAGGTCCCCGAGTCCGGGTTGTCTCTCTGCCGAGACAA
CCACGGCAATGATGCTACCACCAAGCCTGTTCAGATTATGCGGCTGAATT
TAGCTCAGAGCACTCTTGATGAGCTGATCCAGAGCCTCCGGAACGATCAA
ACAGCCCGAGTCCGCCTGGGAAAACATGCGACTCTCTACTACGGCTCCAA
ATCCCAACAATTTCATCCCCTCCCCGAGACGTGTCGATCAGAGCTATATA
GCAGTAGCTCCGCGGACAAGGAAAACCTATATTTCAGCGGTGTTTTGAGC
CATAGCTTGGAGGTCCAGAAGGCGAAGGAAGATACCGCGAGTGCTGACCA
GGCATTGGCCAATCTGGAGCAAAGTCTAAATGCCTTCGAAAGAGGGAAAG
AGTCGAAGAAGACCGCTATAATCACGAGCATTGATGAAGTGAGAGCTCTG
CGAGCAGGCGACAGCCGATACGGTACTGGAAAACAGACTGCTCGTTTGGG
TCGTGCTCCGGCAAGCAAGGTGGAGCTGGAAAAGGATCGACTGCTTACTG
CCAATCGCTCCGTTTCCTCGAGCCCGGCTCTGGGAGTTGTTCGATCACCT
GCATCCATACCTCCGCTTACGCCTACCTCCGCTCCGCTTTCTCAAAACAA
AGATCGCATTCGCCTTGAGGCTCTAAAGGTCCCCTTCATTCACCTCCTCG
CCGTCCGGACAGTTTCCGCCAAATTCCTCGCGCGACAAACTCGCGCGTCC
CTCGAAGACTGCGAGACTCTGGCCCGGAAATACGGCACCGAAAACCGAAT
CAATCCGGAGAAGTTCGATCTTAAAGATAAAACCTATCGAGAGCTTGATG
TGTGGAAATTTCCCTATCCCTCCCAGGAAGATCGACAGGAGGCAATTGAG
AATGCCATCTCTGCATTTGATCGCCTGCGAATCTCCCGGTCCGACAAGCT
CTGGCAGATGCTTCTTCCCAAGGAAGAACGCGGAAAGGGCAAGTGCTTAT
CACGCCTGGACTTGCGGACGGGTCCCATCAAGAAAGCTGCCACGCCTCGG
ATACAGGTACAGACATCTGATGACAATAGCAAGGATGGTTACACTACGGG
TCAGGAGACCGACAAGGCTAGTGGGAATGGTCTAACACCAAGGACGGGTG
AGCCGACGTCAGCTCCCAGATCTGGGACGGTCGCGCAGAAGAAACGGCCC
GGCGACAAGGATGCCGGTGCGAAACGGACCGCCGCAAAGAGCAAGGTTGC
GGGTAACAGTACCTTGACGGGACGCGTCACCAAGAAGGCGGAGCGGAAGA
CGACCGCGAAACAGCCGGAGGGCAAGTTCAAGTCGGCGGAATTCGTTCAT
GACTCGGATGAGGACGACACCGATCTGCCAGATGCATCGTCAACCGAGAA
GCCACAGCCTGCAAAGGCAAAGGCTGAACCAAAACCGCAGACCAAACTGC
AGAAGCCCAGCCCTCCCAGGGAATCCTCTCATGCGCCTACCCCGAAGGTG
GAGCAGCCAGAAGCTACACCTAAATCGGAGCCGATCGACCAAGCGTCTCA
TCGGCCTATGGCAGCAAAGAGGCCTCCTTCCTCGCGACCTCCCGCGCAGA
AGTCCCCTCAGAAATCCCCTCAGAAACCGTCGCCCCTCGGGTCTTCCCCC
CCAACCAACGCCTCTGATATCCAAAATCGCAGTCGTTCTTCAAGTCAAAA
CAATTCTTCAAGTTCCTCGTCATCATCGCCCCTCATAACCCAGGTCAACA
AGCCCAGACCTGTTGCGAGCGCGCCCACCGTGAGGAAAGTGGTCAAGACC
AATGGTGTATCTAAACCGGCTGGAGTTGCCAATCCCTTGAAGCGCAAGGC
GGAGCTTGAGCGGCCTGCAGCGTTAGCTCAAGTCCCCGGGCGTATTGCGG
GGGATCTGGAACACAAACGGCGGCGAGCCGTGAGCACGTCCAGTGGCAGC
ACTGGGAGCGCCTCGCCCCCTCTCCGCCGCGAAGTTACCATCCAGGAGTT
GCACGACAAGTCGAAGAAGTTCAAGCGGTTCTACGCCAAATACCACGCCT
TACATGACGCATTGGCCTCTCAGCAGAATCCGTCGCGAGCCGACTTGGAG
AAGCTCCAGAGGCAGCACATTAGTCTGCGGCGGATGAAGGAAGAGATATG
GGCCGAACATCAACAGCTCCGGGGTGGGCTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008879-T1.utr5p1 | KJC3_008879-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008879-T1.utr3p1 | KJC3_008879-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3325613..3328626 + |
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