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KJC3_008885-T1, KJC3_008885-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008885-T1
Unique NameKJC3_008885-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3350800..3352287+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008885-T1 ID=KJC3_008885-T1|Name=KJC3_008885-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1488bp|location=Sequence derived from alignment at ch6:3350800..3352287+ (Aspergillus niger KJC3)
CAATTCTTGTCCAAACCTCTGTTTCGACTGCTCTCGTTGCACCCTCTGAT
AAGGTTGCAAATAAGGTGCTTATAGTTTCCTGGCTGGGTTCAGTCGAGTA
ATTCCTTCGTGCAATAGTGGTTCTTGGTCCCTGCCCCTCCACCGCTAGAG
ACAACATAAGTCTTCTGGTCTCATCTTTGCTCGACACACCACAATAAGCT
GAGAATATTTCCGTCCAAGCAGCATCATTGCTTTCCAGACACCCCTCTAC
TACCCACAATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGG
TATGCCTGTCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTA
CGAGTGTGAAACCTGCGATGATCAGTTTTTGACTCAAAGGGAAGTGGAGG
AACATATGGATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACA
TGCGGGAGGAAGTTCTACAGTCAAATGTCAGCGGATCAGCACATGAATGC
AATAAATCATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGT
TCCATACGGAAGGTGCTGCAGAGCAGCATATGCAGGCCAAATCCCATTAC
AAGAACTACTGCCACCCCTGTAACCGGCGATTCGATACCGAAAATAACCT
CAAGATGGTAAGGCCTTCTATTTCCTCAAATATCGTGAATAAACTGAGAC
TTCGCTTGTAGCACTTGAATTCGAAGATTCACCGCGGTCAAGACATCTTC
TGTCCTTTTTGCAACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCA
CCTTGAAACCGGCTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTA
TCTACAAATTCGTTCGCAGCCGTGACACCCAGGGCGTTATTACAAGGAAG
CTGCTTGAATGGAATGAGGATGACAACATTCAATACAAGGCTAATTCCCG
TGCATACAACGGCGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCA
ACAGCTTGACCGCACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAG
AAGCTATATCATTGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTAT
AGCTGCTCTGTTTAATCACTTGGAAAGCGAATCTTGCGCCTTTATGCGAT
TCGAGAAGGTACAGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCT
ATTGCATTCTGAAAAAGCACAACACGATACTGCCACTCAGAGAGCTTATC
GCTGGATTCGAATCTGATGTCTGCTCGTACGGGCCTGAAATGTAAGTGTC
GGTATTCCACAGACTGATTTCGGACGCTGTCATGAGCCAGCTACCAGGGC
ATATGGCGCAATCTCGCTACAAGACTGCTCCATTGAGGCCACTGTCTGAC
GTCTATCTATCTCTGTGTATTGAATCTGGTCTGATATTATATTCCTCACC
GCTGGCGGCTAATACAGTCTCATGTCAAAAAATTCGCC
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Coding sequence (CDS) from alignment at ch6:3350800..3352287+

>KJC3_008885-T1 ID=KJC3_008885-T1|Name=KJC3_008885-T1|organism=Aspergillus niger KJC3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch6:3350800..3352287+ (Aspergillus niger KJC3)
ATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCTG
TCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAGTGTG
AAACCTGCGATGATCAGTTTTTGACTCAAAGGGAAGTGGAGGAACATATG
GATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGAG
GAAGTTCTACAGTCAAATGTCAGCGGATCAGCACATGAATGCAATAAATC
ATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATACG
GAAGGTGCTGCAGAGCAGCATATGCAGGCCAAATCCCATTACAAGAACTA
CTGCCACCCCTGTAACCGGCGATTCGATACCGAAAATAACCTCAAGATGC
ACTTGAATTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTTTTGC
AACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAACCGG
CTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAATTCG
TTCGCAGCCGTGACACCCAGGGCGTTATTACAAGGAAGCTGCTTGAATGG
AATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACAACGG
CGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTGACCG
CACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATATCAT
TGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTCTGTT
TAATCACTTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAGGTAC
AGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATTCTGA
ATGTACGACTGTGAAACCTGCCCTCGCTACTTCAACAGCTGGTATGCCTG
TCGCCAGCACATGAACGACACGGGCCATTGGGGCGTGCGGTACGAGTGTG
AAACCTGCGATGATCAGTTTTTGACTCAAAGGGAAGTGGAGGAACATATG
GATGACTACAGACACCACGCACCCAAGATTCCTTGCGAGACATGCGGGAG
GAAGTTCTACAGTCAAATGTCAGCGGATCAGCACATGAATGCAATAAATC
ATTGGGCTCCAACATGGCCATGTGAGACTTGCACGCAGATGTTCCATACG
GAAGGTGCTGCAGAGCAGCATATGCAGGCCAAATCCCATTACAAGAACTA
CTGCCACCCCTGTAACCGGCGATTCGATACCGAAAATAACCTCAAGATGC
ACTTGAATTCGAAGATTCACCGCGGTCAAGACATCTTCTGTCCTTTTTGC
AACGCTGCTTTTACTACGGCCACTGGCGTCGCTCACCACCTTGAAACCGG
CTCCTGCAAACGTGCTACAGGCCTCAATCGCGAGACTATCTACAAATTCG
TTCGCAGCCGTGACACCCAGGGCGTTATTACAAGGAAGCTGCTTGAATGG
AATGAGGATGACAACATTCAATACAAGGCTAATTCCCGTGCATACAACGG
CGCCTACTGGGAGTGCTACTTGTGTCATCGGGAATTCAACAGCTTGACCG
CACTTAATCAACATCTCAATTCGCCCGTGCACAAGCAGAAGCTATATCAT
TGTCCGAACGCGAAGTGTAGGAAGCAGTTTGTTACTATAGCTGCTCTGTT
TAATCACTTGGAAAGCGAATCTTGCGCCTTTATGCGATTCGAGAAGGTAC
AGCGGCAGGTTCAGAATGTGTTCCGTGACCAGAGAGCTATTGCATTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008885KJC3_008885Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008885-T1.utr5p1KJC3_008885-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008885-T1.exon1KJC3_008885-T1.exon1Aspergillus niger KJC3exon
KJC3_008885-T1.exon2KJC3_008885-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008885-T1.cdsKJC3_008885-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008885-T1.utr3p1KJC3_008885-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008885-T1KJC3_008885-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR013087
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF13912
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3350800..3352287 +
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