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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3481223..3482961- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008920-T1 ID=KJC3_008920-T1|Name=KJC3_008920-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1739bp|location=Sequence derived from alignment at ch6:3481223..3482961- (Aspergillus niger KJC3)
GGATGAGCTTCACTACTCCTCAGGACCATTTCACTCTTTCACGTCAGATA
TCCAGGGCAGTGGTCATATCAATCTGACTCAAGCTGAAGTAAATTTTTCT
TTTATTGTGCACACTTGGTACATTGTGCCCGTTGTCATTCGTTCTAGCAT
TCGCGCTTAAGGAATAGCGATTCAAGTCCTAGCTCGCGGCGAGCAAAACA
CACTGCATTCACACATCTTTCATTACTCCTTCTACGAGAGTTGCCTTCTA
GCTTGGCCATCCTAGCAAGTAATCAGAATGGCATATACAGATGATGCTGT
GAAAGCGAAGCTTTCAGCGCTCAACGAAACCCAGGAAGGCATTGTCACAG
TTGCGCAATGGGTTATGTTTCACAGGTAAGATGACAACTGTTCGTATATC
CAAGGGCTCTACTCATATGTATTTTCAACCTTAGACGGCACGCCGAACGG
ACAGCACAGCTCTGGCTGCAGAAACTCCGCGATTCCCCAGCACCGAAACG
TCTGAACCTGATATATTTGGCCAATGGTATAGCTCATCGTTCCAGGTCGG
TTGCGGACCAACACTAACAGCATGTCAGAGGTCGCGCAACAGTCAAGAGC
CCGACGGAAAGAGGACTTTCTCATCGCATTCTCGCCGGTTAGTGTATCAT
TATTGGCCCTGGCAGGTATCAGGAGTTAACATTTACCAGATCATCGCAGA
GGCCACGGCTATCGCATACAAGGGTTCCTCAAACGATATTCAGCAAAAGC
TTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAATCTTTGAACTTCCC
ATTCAGGAGGCCGTAGAAGCTCGAGTAGATGGTAGGTCGCCTTGCGTTGT
TCTTTTCATCCATCCTGCTTACTCCGCCGTAGAGATCGATAAGTCACGCT
CTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCTTTTCAAGCTCGTCG
GGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCTCTACAAGTAGCCGT
TTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCACAGCTGCGAATGCAG
AGTATGATAAGATGCATGACCCTAGCACGCCTTTGCCTACACCTCCAGTG
CATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTTGCGAATGCAGAAAG
CTCTGTATCCGAGGTGATCAAATCACGCATTGCACTCATTGAGGGTCTCG
AGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTAAAGAACAATCAATG
GTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAAGCCACCAAACGGGA
GGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGAGAATTCGCCTGCGG
TCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTATCTCTCGTCCAGAA
GTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATTACGCCTGTTGGTTC
TCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGCAGTGCCCCCTCAAC
CCCAGATACTAGGTGGATTTACCCTGCCTGGATTTGGAAATCCGGCCGAT
TCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGACTCGGCGAGCACCA
AACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCGCAAGGTTACGCACG
AAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACTTGGATGCTGATGTA
GCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAATGA back to topCoding sequence (CDS) from alignment at ch6:3481223..3482961- >KJC3_008920-T1 ID=KJC3_008920-T1|Name=KJC3_008920-T1|organism=Aspergillus niger KJC3|type=CDS|length=6240bp|location=Sequence derived from alignment at ch6:3481223..3482961- (Aspergillus niger KJC3)
AGATCGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCT
CTCTTTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGT
GCCTCTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTG
CCACAGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCT
TTGCCTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGC
CCTTGCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTG
CACTCATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTA
TCTAAAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGAC
GGAAGCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTG
CCGAGAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAA
CCTATCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGC
TATTACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCA
GCGCAGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGA
TTTGGAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGT
GGGACTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGA
GGCGCAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGC
GACTTGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCA
GCAATGAATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAA
ACGATATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGA
TCAATCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGA
GGTCGCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCAT
TCTCGCCGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACT
CCGCGATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATG
ATGGCATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGA
AACCCAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAG
ATCGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCT
CTTTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGC
CTCTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCC
ACAGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTT
GCCTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCC
TTGCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCA
CTCATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATC
TAAAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGG
AAGCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCC
GAGAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACC
TATCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTA
TTACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGC
GCAGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATT
TGGAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGG
GACTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGG
CGCAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGA
CTTGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGC
AATGAATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAAC
GATATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATC
AATCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGG
TCGCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTC
TCGCCGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCC
GCGATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGAT
GGCATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAA
CCCAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAGAT
CGATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCT
TTTCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCT
CTACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCAC
AGCTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTTGC
CTACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTT
GCGAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCACT
CATTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTA
AAGAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAA
GCCACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGA
GAATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTA
TCTCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATT
ACGCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGC
AGTGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATTTG
GAAATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGA
CTCGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCG
CAAGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACT
TGGATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAA
TGAATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAACGA
TATTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAA
TCTTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGGTC
GCGCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTCTC
GCCGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCCGC
GATTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGATGG
CATATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAACC
CAGGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAGATCG
ATAAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCTTT
TCAAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCTCT
ACAAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCACAG
CTGCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTTGCCT
ACACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTTGC
GAATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCACTCA
TTGAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTAAA
GAACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAAGC
CACCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGAGA
ATTCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTATC
TCTCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATTAC
GCCTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGCAG
TGCCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATTTGGA
AATCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGACT
CGGCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCGCA
AGGTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACTTG
GATGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAATG
AATCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAACGATA
TTCAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAATC
TTTGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGGTCGC
GCAACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTCTCGC
CGACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCCGCGA
TTCCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGATGGCA
TATACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAACCCA
GGAAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAGAGATCGAT
AAGTCACGCTCTACCGGTAAAAAACCGTTGCTAGGAGGGTCTCTCTTTTC
AAGCTCGTCGGGTTCAACACCGTCTGAGCTTCAGCCTCTAGTGCCTCTAC
AAGTAGCCGTTTCAAAGGCTACAGTGGCTTCGACTGCGTCTGCCACAGCT
GCGAATGCAGAGTATGATAAGATGCATGACCCTAGCACGCCTTTGCCTAC
ACCTCCAGTGCATGCGGCGCGGCTTAGCCAGTTGTTGAAAGCCCTTGCGA
ATGCAGAAAGCTCTGTATCCGAGGTGATCAAATCACGCATTGCACTCATT
GAGGGTCTCGAGAAGCTTCTCGAAACTAATCGCTCAGCTTTATCTAAAGA
ACAATCAATGGTCGCACAGTTGACGGAAAGAAAATCGGAGACGGAAGCCA
CCAAACGGGAGGTTGAAGATGGGATTATGCGAGGGCTTTCTGCCGAGAAT
TCGCCTGCGGTCAACCATGGCGATGCTGGGCCAGAGGGAGAACCTATCTC
TCGTCCAGAAGTTGAGGCCCTGACTCCTCCGCCAGTTGAGGCTATTACGC
CTGTTGGTTCTCCCAAGCAGGCCGCACAGGAATCAGACTTCAGCGCAGTG
CCCCCTCAACCCCAGATACTAGGTGGATTTACCCTGCCTGGATTTGGAAA
TCCGGCCGATTCATCTCTTTCGGCGGCGGGCTTCCCTCCTGTGGGACTCG
GCGAGCACCAAACGGACGGTTCAAACGGGCTCCATGCCAAGAGGCGCAAG
GTTACGCACGAAGAGGAGGATTATGCTCAGTTCGCAGGCGGCGACTTGGA
TGCTGATGTAGCTGAGCTCTTGAAACAGGAAGGCGATGCCCAGCAATGAA
TCATCGCAGAGGCCACGGCTATCGCATACAAGGGTTCCTCAAACGATATT
CAGCAAAAGCTTCGTCGCGTGGTTGAAGTATGGAGACAGAGATCAATCTT
TGAACTTCCCATTCAGGAGGCCGTAGAAGCTCGAGTAGATGAGGTCGCGC
AACAGTCAAGAGCCCGACGGAAAGAGGACTTTCTCATCGCATTCTCGCCG
ACGGCACGCCGAACGGACAGCACAGCTCTGGCTGCAGAAACTCCGCGATT
CCCCAGCACCGAAACGTCTGAACCTGATATATTTGGCCAATGATGGCATA
TACAGATGATGCTGTGAAAGCGAAGCTTTCAGCGCTCAACGAAACCCAGG
AAGGCATTGTCACAGTTGCGCAATGGGTTATGTTTCACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008920-T1.utr5p1 | KJC3_008920-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008942 |
| DBxref | InterPro:IPR006903 |
| DBxref | InterPro:IPR006569 |
| DBxref | PFAM:PF04818 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3481223..3482961 - |
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