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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3486604..3489533+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008923-T1 ID=KJC3_008923-T1|Name=KJC3_008923-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2930bp|location=Sequence derived from alignment at ch6:3486604..3489533+ (Aspergillus niger KJC3) CATGTTCTGACTTCCAAGCGTCTAGCGGTCTCCCGGAGAGCGATTTACTT
TCGATTTGTCATGAGATCTAGCAGACACCGGGCTGTCTAGTGGGATATGG
CACCCTGATTACTCCGTTTGGCATCCATTTGAGCAGCCATCCGAATCCGC
TTTCTATCGTCCGAAATGCGCGGAGCCAGGTTGCTGGCTTCCTGGGCCCC
CGGCGTCACCGCCAGACGGGGAGCTCAGGTGAATGGGAGCATACTCAATG
AGCTCTACTTCAATGCTCGTCCACTTCAATCAGGAATTGGCATCTCTGGC
GTCTCTAGCCGACAATTCTCGGGAATTTCGGCTTCATTACGCAACAACTT
CTCGCTGACGTCTGGACTATCCATCCGTCAAAGTAACGGTTCACGGTTCG
ATATCATCCGGTCGCAATTAATAGCGCAATCTCGGTGCTTCTCCTCGTCG
CAACGGTCATTGGAATCCAAGCCAGTGAACTCATCGACTAAATCTGCTCA
AACGAATAACGCCACGGCTCAAGACAAGGAAGATGAAGACATAGACAAGG
GCTTCGAGCTATCGGAAAAGGGAGCGCAGGCTGCGCAGGTAAACCTTGCC
GCTAAGCTAAGCAAAGACGGCTCTGGAAATAAGAAAGCCGGTTTTAAAGA
GATATGGAGACTTCTGCTCATTGCGCGACCCGAAGCTAGAAAGCTTGGGT
TTGCTTTCTTTTTCCTGCTCATCTCGTCATCAATCACCATGTCCGTTCCC
TTCTCCATCGGCAAAATCATGGATGCAGCTACAAAGTCTTCTGACGAAGA
AGGAGGCGGTGGAAACCTGCTCTTTGGCTTGAGCGTACCGATGTTCTATG
GTGCTTTGGCCGGTATCCTGACACTGGGTGCCGCTGCGAACTATGGCCGT
ATTGTCATTCTCCGTATCGTTGGAGAGCGCATTGTCTCAAGGCTTCGCTC
GAAGCTTTTCCGCAATACTTTTGTCCAAGATGCGGAATTCTTCGATGCGA
ACAGAGTGGGCGACTTGATCTCACGACTCGGTTCTGATACCATTATTGTG
GGCAAAAGTATCACGCAGAACTTGTCGGACGGTTTGCGAGCAGCCGTCAG
TGGTGCAGCAGGCTTTGGTCTGATGACCTATGTTAGTCTCAAGCTGTCCA
GTGTCTTGCTTGTGCTGTTGCCGCCTATTGGTCTCGGAGCATTCTTCTAT
GGTAGGGCGATAAGGAACCTTAGTCGCAAGATCCAGAGAAACCTCGGTAC
TTTGACCAAGATCGCGGAAGAGCGTCTTGGTAATGTCAAGACTAGCCAGT
CCTTTGCTGGTGAGATCCTTGAGGTGAACCGATACAACAACCAAGTTCGC
AAGATCTTCGAGCTTGGCAAGAGGGAATCTCTGATTAGCGCTACCTTCTT
CAGTTCCGTAAGTTCCCCCGTATTTTTGCCTTTCAATTTAGCGCCACTTA
GCTGACAGCTCGATCAGACTGGCTTCATGGGCAACATGACGATCCTTGCA
TTGCTTTATGTTGGAGGCGGCATGGTTCAGTCAGGTGGCATCACGATTGG
AGAGTTGACTTCCTTCTTGATGTATACTGCTTATGCCGGTTCCAGCATGT
TCGGTCTCTCTAGCTTCTACTCCGAGCTGATGAAAGGTGTGGGAGCTGCC
AGTCGTCTCTTCGAGTTGCAGGATCGTGAGCCAACGATATCCCCAACGAA
GGGAAAGAAGGTTGAATCGGCTCGTGGTCCTATCCGTTTTGAGAACGTGA
ACTTCAGCTACCCCACGCGACCTGCTGTTCCTATCTTCAAGGAATTGAAC
TTCGAGATTCCACAAGGGAAGAATGTCGCCATCGTCGGACCTTCAGGCGG
AGGAAAGTCAACCATTGCTTCGCTTCTACTGAGATTCTACAACCCAACCG
AAGGACGTGTTCTGATTAATGGCCAGGACATCAGCGAGATGAACGCCAAG
TCCCTCCGCAGGAAGATTGGTGTTGTTGCTCAGGAGCCTGTCCTGTTCTC
GGGATCAATTGCTGAGAACATCTCTTATGGCAAGCCACGGGCTACCAGGT
CAGAAATCATCGCAGCAGCCAGGAAAGCGAACTGCCAGTTTATCAGTGAT
TTTGTAAGTAGAAAACCTACCACTAGACTGTACCTTCTACTAACATGTTT
CTAGCCGGATGGACTCGACACTCAGGTTGGACCCCGCGGAGCTCAACTCT
CCGGTGGACAGAAGCAGCGCATTGCCATCGCTCGCGCTCTCATCAAGGAT
CCCGACATTCTGATACTGGATGAAGCGACCTCTGCTCTTGATGCAGAATC
TGAGACATTGGTCAACAGCGCTCTTGCTGCCCTTCTTCGTGGAAACAACA
CCACCATCAGCATCGCTCACAGACTGTCTACAATCAAGCGCTCTGATACT
ATCATCGTGCTTGCCCCTGATGGAAAGGTGGCCGAGCAGGGTACCTACGA
GGAGCTCAGCTCTCGTCCTGACGGCGCCTTCACAAAGCTGATGGAATGGC
AGATCAATGGTGGCGAGAACACACCAGCAAACGCCCCCATCAGCCCAGCG
ACAGAAGAGAAACTGTGGCAGTTAGAGAAAGAGGAAGCTGAAGCTGACGT
CGAAGATGCCAGCAGCGAGCGCGACCAGCAGAAGAAGTAGGAGCGTCCAC
TGCTTCGTGGATGTCCAGGCGCCTGCCTTCCTGGGCACCCACTCTTTGTT
TTTATTTTCTTCGTTATCTTGTATTCAGCAGTGTAGAGTATATAGCTCCT
CTATGGGGCACATAGTACACTATTGTCTAGACAGCTGGGCCGCCTAAAGC
TGGATGTACTATCTATCTACTACGGGATACCCCCCACACCGGGGTGGCTC
AGCTTTTGGTGACTGGATAGATAAAATATAATACCCATCTCTACTTCTGA
ACTATATTCTCTGTGCAATTGTTGACACGC back to topCoding sequence (CDS) from alignment at ch6:3486604..3489533+ >KJC3_008923-T1 ID=KJC3_008923-T1|Name=KJC3_008923-T1|organism=Aspergillus niger KJC3|type=CDS|length=7092bp|location=Sequence derived from alignment at ch6:3486604..3489533+ (Aspergillus niger KJC3) ATGCGCGGAGCCAGGTTGCTGGCTTCCTGGGCCCCCGGCGTCACCGCCAG ACGGGGAGCTCAGGTGAATGGGAGCATACTCAATGAGCTCTACTTCAATG CTCGTCCACTTCAATCAGGAATTGGCATCTCTGGCGTCTCTAGCCGACAA TTCTCGGGAATTTCGGCTTCATTACGCAACAACTTCTCGCTGACGTCTGG ACTATCCATCCGTCAAAGTAACGGTTCACGGTTCGATATCATCCGGTCGC AATTAATAGCGCAATCTCGGTGCTTCTCCTCGTCGCAACGGTCATTGGAA TCCAAGCCAGTGAACTCATCGACTAAATCTGCTCAAACGAATAACGCCAC GGCTCAAGACAAGGAAGATGAAGACATAGACAAGGGCTTCGAGCTATCGG AAAAGGGAGCGCAGGCTGCGCAGGTAAACCTTGCCGCTAAGCTAAGCAAA GACGGCTCTGGAAATAAGAAAGCCGGTTTTAAAGAGATATGGAGACTTCT GCTCATTGCGCGACCCGAAGCTAGAAAGCTTGGGTTTGCTTTCTTTTTCC TGCTCATCTCGTCATCAATCACCATGTCCGTTCCCTTCTCCATCGGCAAA ATCATGGATGCAGCTACAAAGTCTTCTGACGAAGAAGGAGGCGGTGGAAA CCTGCTCTTTGGCTTGAGCGTACCGATGTTCTATGGTGCTTTGGCCGGTA TCCTGACACTGGGTGCCGCTGCGAACTATGGCCGTATTGTCATTCTCCGT ATCGTTGGAGAGCGCATTGTCTCAAGGCTTCGCTCGAAGCTTTTCCGCAA TACTTTTGTCCAAGATGCGGAATTCTTCGATGCGAACAGAGTGGGCGACT TGATCTCACGACTCGGTTCTGATACCATTATTGTGGGCAAAAGTATCACG CAGAACTTGTCGGACGGTTTGCGAGCAGCCGTCAGTGGTGCAGCAGGCTT TGGTCTGATGACCTATGTTAGTCTCAAGCTGTCCAGTGTCTTGCTTGTGC TGTTGCCGCCTATTGGTCTCGGAGCATTCTTCTATGGTAGGGCGATAAGG AACCTTAGTCGCAAGATCCAGAGAAACCTCGGTACTTTGACCAAGATCGC GGAAGAGCGTCTTGGTAATGTCAAGACTAGCCAGTCCTTTGCTGGTGAGA TCCTTGAGGTGAACCGATACAACAACCAAGTTCGCAAGATCTTCGAGCTT GGCAAGAGGGAATCTCTGATTAGCGCTACCTTCTTCAGTTCCACTGGCTT CATGGGCAACATGACGATCCTTGCATTGCTTTATGTTGGAGGCGGCATGG TTCAGTCAGGTGGCATCACGATTGGAGAGTTGACTTCCTTCTTGATGTAT ACTGCTTATGCCGGTTCCAGCATGTTCGGTCTCTCTAGCTTCTACTCCGA GCTGATGAAAGGTGTGGGAGCTGCCAGTCGTCTCTTCGAGTTGCAGGATC GTGAGCCAACGATATCCCCAACGAAGGGAAAGAAGGTTGAATCGGCTCGT GGTCCTATCCGTTTTGAGAACGTGAACTTCAGCTACCCCACGCGACCTGC TGTTCCTATCTTCAAGGAATTGAACTTCGAGATTCCACAAGGGAAGAATG TCGCCATCGTCGGACCTTCAGGCGGAGGAAAGTCAACCATTGCTTCGCTT CTACTGAGATTCTACAACCCAACCGAAGGACGTGTTCTGATTAATGGCCA GGACATCAGCGAGATGAACGCCAAGTCCCTCCGCAGGAAGATTGGTGTTG TTGCTCAGGAGCCTGTCCTGTTCTCGGGATCAATTGCTGAGAACATCTCT TATGGCAAGCCACGGGCTACCAGGTCAGAAATCATCGCAGCAGCCAGGAA AGCGAACTGCCAGTTTATCAGTGATTTTCCGGATGGACTCGACACTCAGG TTGGACCCCGCGGAGCTCAACTCTCCGGTGGACAGAAGCAGCGCATTGCC ATCGCTCGCGCTCTCATCAAGGATCCCGACATTCTGATACTGGATGAAGC GACCTCTGCTCTTGATGCAGAATCTGAGACATTGGTCAACAGCGCTCTTG CTGCCCTTCTTCGTGGAAACAACACCACCATCAGCATCGCTCACAGACTG TCTACAATCAAGCGCTCTGATACTATCATCGTGCTTGCCCCTGATGGAAA GGTGGCCGAGCAGGGTACCTACGAGGAGCTCAGCTCTCGTCCTGACGGCG CCTTCACAAAGCTGATGGAATGGCAGATCAATGGTGGCGAGAACACACCA GCAAACGCCCCCATCAGCCCAGCGACAGAAGAGAAACTGTGGCAGTTAGA GAAAGAGGAAGCTGAAGCTGACGTCGAAGATGCCAGCAGCGAGCGCGACC AGCAGAAGAAGTAGATGCGCGGAGCCAGGTTGCTGGCTTCCTGGGCCCCC GGCGTCACCGCCAGACGGGGAGCTCAGGTGAATGGGAGCATACTCAATGA GCTCTACTTCAATGCTCGTCCACTTCAATCAGGAATTGGCATCTCTGGCG TCTCTAGCCGACAATTCTCGGGAATTTCGGCTTCATTACGCAACAACTTC TCGCTGACGTCTGGACTATCCATCCGTCAAAGTAACGGTTCACGGTTCGA TATCATCCGGTCGCAATTAATAGCGCAATCTCGGTGCTTCTCCTCGTCGC AACGGTCATTGGAATCCAAGCCAGTGAACTCATCGACTAAATCTGCTCAA ACGAATAACGCCACGGCTCAAGACAAGGAAGATGAAGACATAGACAAGGG CTTCGAGCTATCGGAAAAGGGAGCGCAGGCTGCGCAGGTAAACCTTGCCG CTAAGCTAAGCAAAGACGGCTCTGGAAATAAGAAAGCCGGTTTTAAAGAG ATATGGAGACTTCTGCTCATTGCGCGACCCGAAGCTAGAAAGCTTGGGTT TGCTTTCTTTTTCCTGCTCATCTCGTCATCAATCACCATGTCCGTTCCCT TCTCCATCGGCAAAATCATGGATGCAGCTACAAAGTCTTCTGACGAAGAA GGAGGCGGTGGAAACCTGCTCTTTGGCTTGAGCGTACCGATGTTCTATGG TGCTTTGGCCGGTATCCTGACACTGGGTGCCGCTGCGAACTATGGCCGTA TTGTCATTCTCCGTATCGTTGGAGAGCGCATTGTCTCAAGGCTTCGCTCG AAGCTTTTCCGCAATACTTTTGTCCAAGATGCGGAATTCTTCGATGCGAA CAGAGTGGGCGACTTGATCTCACGACTCGGTTCTGATACCATTATTGTGG GCAAAAGTATCACGCAGAACTTGTCGGACGGTTTGCGAGCAGCCGTCAGT GGTGCAGCAGGCTTTGGTCTGATGACCTATGTTAGTCTCAAGCTGTCCAG TGTCTTGCTTGTGCTGTTGCCGCCTATTGGTCTCGGAGCATTCTTCTATG GTAGGGCGATAAGGAACCTTAGTCGCAAGATCCAGAGAAACCTCGGTACT TTGACCAAGATCGCGGAAGAGCGTCTTGGTAATGTCAAGACTAGCCAGTC CTTTGCTGGTGAGATCCTTGAGGTGAACCGATACAACAACCAAGTTCGCA AGATCTTCGAGCTTGGCAAGAGGGAATCTCTGATTAGCGCTACCTTCTTC AGTTCCACTGGCTTCATGGGCAACATGACGATCCTTGCATTGCTTTATGT TGGAGGCGGCATGGTTCAGTCAGGTGGCATCACGATTGGAGAGTTGACTT CCTTCTTGATGTATACTGCTTATGCCGGTTCCAGCATGTTCGGTCTCTCT AGCTTCTACTCCGAGCTGATGAAAGGTGTGGGAGCTGCCAGTCGTCTCTT CGAGTTGCAGGATCGTGAGCCAACGATATCCCCAACGAAGGGAAAGAAGG TTGAATCGGCTCGTGGTCCTATCCGTTTTGAGAACGTGAACTTCAGCTAC CCCACGCGACCTGCTGTTCCTATCTTCAAGGAATTGAACTTCGAGATTCC ACAAGGGAAGAATGTCGCCATCGTCGGACCTTCAGGCGGAGGAAAGTCAA CCATTGCTTCGCTTCTACTGAGATTCTACAACCCAACCGAAGGACGTGTT CTGATTAATGGCCAGGACATCAGCGAGATGAACGCCAAGTCCCTCCGCAG GAAGATTGGTGTTGTTGCTCAGGAGCCTGTCCTGTTCTCGGGATCAATTG CTGAGAACATCTCTTATGGCAAGCCACGGGCTACCAGGTCAGAAATCATC GCAGCAGCCAGGAAAGCGAACTGCCAGTTTATCAGTGATTTTCCGGATGG ACTCGACACTCAGGTTGGACCCCGCGGAGCTCAACTCTCCGGTGGACAGA AGCAGCGCATTGCCATCGCTCGCGCTCTCATCAAGGATCCCGACATTCTG ATACTGGATGAAGCGACCTCTGCTCTTGATGCAGAATCTGAGACATTGGT CAACAGCGCTCTTGCTGCCCTTCTTCGTGGAAACAACACCACCATCAGCA TCGCTCACAGACTGTCTACAATCAAGCGCTCTGATACTATCATCGTGCTT GCCCCTGATGGAAAGGTGGCCGAGCAGGGTACCTACGAGGAGCTCAGCTC TCGTCCTGACGGCGCCTTCACAAAGCTGATGGAATGGCAGATCAATGGTG GCGAGAACACACCAGCAAACGCCCCCATCAGCCCAGCGACAGAAGAGAAA CTGTGGCAGTTAGAGAAAGAGGAAGCTGAAGCTGACGTCGAAGATGCCAG CAGCGAGCGCGACCAGCAGAAGAAGTAGATGCGCGGAGCCAGGTTGCTGG CTTCCTGGGCCCCCGGCGTCACCGCCAGACGGGGAGCTCAGGTGAATGGG AGCATACTCAATGAGCTCTACTTCAATGCTCGTCCACTTCAATCAGGAAT TGGCATCTCTGGCGTCTCTAGCCGACAATTCTCGGGAATTTCGGCTTCAT TACGCAACAACTTCTCGCTGACGTCTGGACTATCCATCCGTCAAAGTAAC GGTTCACGGTTCGATATCATCCGGTCGCAATTAATAGCGCAATCTCGGTG CTTCTCCTCGTCGCAACGGTCATTGGAATCCAAGCCAGTGAACTCATCGA CTAAATCTGCTCAAACGAATAACGCCACGGCTCAAGACAAGGAAGATGAA GACATAGACAAGGGCTTCGAGCTATCGGAAAAGGGAGCGCAGGCTGCGCA GGTAAACCTTGCCGCTAAGCTAAGCAAAGACGGCTCTGGAAATAAGAAAG CCGGTTTTAAAGAGATATGGAGACTTCTGCTCATTGCGCGACCCGAAGCT AGAAAGCTTGGGTTTGCTTTCTTTTTCCTGCTCATCTCGTCATCAATCAC CATGTCCGTTCCCTTCTCCATCGGCAAAATCATGGATGCAGCTACAAAGT CTTCTGACGAAGAAGGAGGCGGTGGAAACCTGCTCTTTGGCTTGAGCGTA CCGATGTTCTATGGTGCTTTGGCCGGTATCCTGACACTGGGTGCCGCTGC GAACTATGGCCGTATTGTCATTCTCCGTATCGTTGGAGAGCGCATTGTCT CAAGGCTTCGCTCGAAGCTTTTCCGCAATACTTTTGTCCAAGATGCGGAA TTCTTCGATGCGAACAGAGTGGGCGACTTGATCTCACGACTCGGTTCTGA TACCATTATTGTGGGCAAAAGTATCACGCAGAACTTGTCGGACGGTTTGC GAGCAGCCGTCAGTGGTGCAGCAGGCTTTGGTCTGATGACCTATGTTAGT CTCAAGCTGTCCAGTGTCTTGCTTGTGCTGTTGCCGCCTATTGGTCTCGG AGCATTCTTCTATGGTAGGGCGATAAGGAACCTTAGTCGCAAGATCCAGA GAAACCTCGGTACTTTGACCAAGATCGCGGAAGAGCGTCTTGGTAATGTC AAGACTAGCCAGTCCTTTGCTGGTGAGATCCTTGAGGTGAACCGATACAA CAACCAAGTTCGCAAGATCTTCGAGCTTGGCAAGAGGGAATCTCTGATTA GCGCTACCTTCTTCAGTTCCACTGGCTTCATGGGCAACATGACGATCCTT GCATTGCTTTATGTTGGAGGCGGCATGGTTCAGTCAGGTGGCATCACGAT TGGAGAGTTGACTTCCTTCTTGATGTATACTGCTTATGCCGGTTCCAGCA TGTTCGGTCTCTCTAGCTTCTACTCCGAGCTGATGAAAGGTGTGGGAGCT GCCAGTCGTCTCTTCGAGTTGCAGGATCGTGAGCCAACGATATCCCCAAC GAAGGGAAAGAAGGTTGAATCGGCTCGTGGTCCTATCCGTTTTGAGAACG TGAACTTCAGCTACCCCACGCGACCTGCTGTTCCTATCTTCAAGGAATTG AACTTCGAGATTCCACAAGGGAAGAATGTCGCCATCGTCGGACCTTCAGG CGGAGGAAAGTCAACCATTGCTTCGCTTCTACTGAGATTCTACAACCCAA CCGAAGGACGTGTTCTGATTAATGGCCAGGACATCAGCGAGATGAACGCC AAGTCCCTCCGCAGGAAGATTGGTGTTGTTGCTCAGGAGCCTGTCCTGTT CTCGGGATCAATTGCTGAGAACATCTCTTATGGCAAGCCACGGGCTACCA GGTCAGAAATCATCGCAGCAGCCAGGAAAGCGAACTGCCAGTTTATCAGT GATTTTCCGGATGGACTCGACACTCAGGTTGGACCCCGCGGAGCTCAACT CTCCGGTGGACAGAAGCAGCGCATTGCCATCGCTCGCGCTCTCATCAAGG ATCCCGACATTCTGATACTGGATGAAGCGACCTCTGCTCTTGATGCAGAA TCTGAGACATTGGTCAACAGCGCTCTTGCTGCCCTTCTTCGTGGAAACAA CACCACCATCAGCATCGCTCACAGACTGTCTACAATCAAGCGCTCTGATA CTATCATCGTGCTTGCCCCTGATGGAAAGGTGGCCGAGCAGGGTACCTAC GAGGAGCTCAGCTCTCGTCCTGACGGCGCCTTCACAAAGCTGATGGAATG GCAGATCAATGGTGGCGAGAACACACCAGCAAACGCCCCCATCAGCCCAG CGACAGAAGAGAAACTGTGGCAGTTAGAGAAAGAGGAAGCTGAAGCTGAC GTCGAAGATGCCAGCAGCGAGCGCGACCAGCAGAAGAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0042626 | ATPase-coupled transmembrane transporter activity |
GO:0016887 | ATPase activity |
GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008923-T1.utr5p1 | KJC3_008923-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008923-T1.utr3p1 | KJC3_008923-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR027417 |
DBxref | InterPro:IPR017871 |
DBxref | InterPro:IPR011527 |
DBxref | InterPro:IPR003439 |
DBxref | InterPro:IPR036640 |
DBxref | InterPro:IPR003593 |
DBxref | PFAM:PF00005 |
DBxref | PFAM:PF00664 |
Product | multidrug-resistance transporter mdr2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:3486604..3489533 + |
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